PI0002967 (gene) Melon (PI 482460) v1

Overview
NamePI0002967
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 10199400 .. 10199733 (+)
RNA-Seq ExpressionPI0002967
SyntenyPI0002967
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTTCGAAGTTTCTTATCGTATCCATAGTTGTCTTGGTGATGTTCGTTTGTTGTGTTTCATCAACAAGTATGTGTTTTTATCTCATAATTAACTCTTTTGATTTCATTTCGCGTCTTGGAATGTTTTCCAAAACAATAATTTAACATTAATCTGTGATCTTATGCAGTTGAACGGGACATCTACATGAGTTGTATTCGACCATGTTCTGACAACTACGACGATGATTCATGTTATTATGATTGCATCCGAAATAATAAAGCCGTCGGATTTTGTTATCCCAAGCTACCTAGCATTTCTAATGAAAAAGATTGTTGTTGCAATAACTGA

mRNA sequence

ATGGCATCTTCGAAGTTTCTTATCGTATCCATAGTTGTCTTGGTGATGTTCGTTTGTTGTGTTTCATCAACAATTGAACGGGACATCTACATGAGTTGTATTCGACCATGTTCTGACAACTACGACGATGATTCATGTTATTATGATTGCATCCGAAATAATAAAGCCGTCGGATTTTGTTATCCCAAGCTACCTAGCATTTCTAATGAAAAAGATTGTTGTTGCAATAACTGA

Coding sequence (CDS)

ATGGCATCTTCGAAGTTTCTTATCGTATCCATAGTTGTCTTGGTGATGTTCGTTTGTTGTGTTTCATCAACAATTGAACGGGACATCTACATGAGTTGTATTCGACCATGTTCTGACAACTACGACGATGATTCATGTTATTATGATTGCATCCGAAATAATAAAGCCGTCGGATTTTGTTATCCCAAGCTACCTAGCATTTCTAATGAAAAAGATTGTTGTTGCAATAACTGA

Protein sequence

MASSKFLIVSIVVLVMFVCCVSSTIERDIYMSCIRPCSDNYDDDSCYYDCIRNNKAVGFCYPKLPSISNEKDCCCNN
Homology
BLAST of PI0002967 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-16
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 0

Query: 1  MASSKFLIVSIVVLVMFVCCVSSTIERDIYMSCIRPCSDNYDDDSCYYDCIRNNKAVGFC 60
          MA+ K   +SIVVLV+F C VS+T    + + C+RPC D YDD+SCY DCIR N   GFC
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTKGDVLNVHCVRPCYDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLPSISNEKDCCCNN 78
          YPKLP  S +KDCCCN+
Sbjct: 61 YPKLP--STDKDCCCND 75

BLAST of PI0002967 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.7e-16
Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 0

Query: 1  MASSKFLIVSIVVLVMFVCCVSSTIERDIYMSCIRPCSDNYDDDSCYYDCIRNNKAVGFC 60
          MA+ K   +SIVVL++F C  S+T    + + C+RPCSD YDD+SCY DCI+ N   GFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLPSISNEKDCCCN 77
          YPKLP  S +KDCCCN
Sbjct: 61 YPKLP--STDKDCCCN 74

BLAST of PI0002967 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.6e-12
Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 0

Query: 33 CIRPCSDNYDDDSCYYDCIRNNKAVGFCYPKLPSISNEKDCCCN 77
          C+RPCSD YDD+SCY DCIR N   GFCYPKLP  S +KDCCCN
Sbjct: 12 CVRPCSDTYDDESCYNDCIRENLGAGFCYPKLP--STDKDCCCN 53

BLAST of PI0002967 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.6e-09
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0

Query: 1  MASSKFLIVSIVVLVMFVCCVSSTIERDIYMSCIRPCSDNYDDDSCYYDCIRNNKAVGFC 60
          M + K  IVS++V V F  C +S++E D   +C+ PCS+N  D  C   CI  ++  GFC
Sbjct: 1  MVTQKLFIVSMLVAVTF-SCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFC 60

Query: 61 YPKLPSISNEKDCCCNN 78
           PKLP IS+ K CCCNN
Sbjct: 61 VPKLPGISDMKVCCCNN 76

BLAST of PI0002967 vs. NCBI nr
Match: KAG6586428.1 (hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.1 bits (253), Expect = 2.3e-18
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0

Query: 1  MASSKFLIVSIVVLVMFVCCVSSTIERDIYMSCIRPCSDNYDDDSCYYDCIRNNKAVGFC 60
          MAS K   V  +V++MF    +S+ + D++M CIRPC D +DDDSCY DC+R NK  GFC
Sbjct: 1  MASRKLFTVFAIVMMMFY--FASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFC 60

Query: 61 YPKLPSISNEKDCCCNN 78
          YPKLPS++NEKDCCCNN
Sbjct: 61 YPKLPSVTNEKDCCCNN 75

BLAST of PI0002967 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 1.0e-15
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 0

Query: 1  MASSKFLIVSIVVLVMFVCCVSSTIERDIYMSCIRPCSDNYDDDSCYYDCIRNNKAVGFC 60
          MA+ K   VSIV+L++  C VS+T    + ++C+RPCSD YDD+SCY DCIR N   GFC
Sbjct: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLPSISNEKDCCCN 77
          YPKLP  S +KDCCCN
Sbjct: 61 YPKLP--STDKDCCCN 74

BLAST of PI0002967 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 1.8e-15
Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 0

Query: 1  MASSKFLIVSIVVLVMFVCCVSSTIERDIYMSCIRPCSDNYDDDSCYYDCIRNNKAVGFC 60
          MA+ K   +SIVVL++F C  S+T    + + C+RPCSD YDD+SCY DCI+ N   GFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLPSISNEKDCCCN 77
          YPKLP  S +KDCCCN
Sbjct: 61 YPKLP--STDKDCCCN 74

BLAST of PI0002967 vs. NCBI nr
Match: KAE8651701.1 (hypothetical protein Csa_006400, partial [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0

Query: 31 MSCIRPCSDNYDDDSCYYDCIRNNKAVGFCYPKLPSISNEKDCCCN 77
          M C++PCSD YDD+SCY DCI+ N   GFCYPKLP  S +KDCCC+
Sbjct: 21 MHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKLP--STDKDCCCS 64

BLAST of PI0002967 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 9.5e-09
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0

Query: 1  MASSKFLIVSIVVLVMFVCCVSSTIERDIYMSCIRPCSDNYDDDSCYYDCIRNNKAVGFC 60
          M + K  IVS++V V F  C +S++E D   +C+ PCS+N  D  C   CI  ++  GFC
Sbjct: 1  MVTQKLFIVSMLVAVTF-SCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFC 60

Query: 61 YPKLPSISNEKDCCCNN 78
           PKLP IS+ K CCCNN
Sbjct: 61 VPKLPGISDMKVCCCNN 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJG53.0e-1658.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1[more]
A0A0A0LHG98.7e-1656.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1[more]
A0A0A0LKF57.6e-1272.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1[more]
A0A0A0L1R84.6e-0946.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6586428.12.3e-1859.74hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8651697.11.0e-1557.89hypothetical protein Csa_006343 [Cucumis sativus][more]
KGN61228.11.8e-1556.58hypothetical protein Csa_006463 [Cucumis sativus][more]
KAE8651701.11.3e-1065.22hypothetical protein Csa_006400, partial [Cucumis sativus][more]
KGN54497.19.5e-0946.75hypothetical protein Csa_012842 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002967.1PI0002967.1mRNA