Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCACTTTCTTGAGGAAATGACCATAGACGAGGATGAGGAAGCTACCATGAATCGATTCTACAACGAACTTAACGAGAAAATTGTTGAGATGCTTGTCGATCATGAAGAAATTCAACCTTGTGAGAATTTGGAAGAAATGGTGCACATTGCCATCAAGATAGAACAACTACTTCAAAGGAAACCTTCAAGGTACACTAAATCTAAATCTAGTACTAATTTAAACTCATTAGTAGAAAAAGTTAGTTTACCTACAAAATTTGAGCATTTTGATAGGGTAGGAAGTAGTAAAGAGATATTTGATATTGTCGTGTCTATGTACGATCATAATGTTTTGTCTAGTAAATAA
mRNA sequence
ATGTTGCACTTTCTTGAGGAAATGACCATAGACGAGGATGAGGAAGCTACCATGAATCGATTCTACAACGAACTTAACGAGAAAATTGTTGAGATGCTTGTCGATCATGAAGAAATTCAACCTTGTGAGAATTTGGAAGAAATGGTGCACATTGCCATCAAGATAGAACAACTACTTCAAAGGAAACCTTCAAGGTACACTAAATCTAAATCTAGTACTAATTTAAACTCATTAGTAGAAAAAGTTAGTTTACCTACAAAATTTGAGCATTTTGATAGGGTAGGAAGTAGTAAAGAGATATTTGATATTGTCGTGTCTATGTACGATCATAATGTTTTGTCTAGTAAATAA
Coding sequence (CDS)
ATGTTGCACTTTCTTGAGGAAATGACCATAGACGAGGATGAGGAAGCTACCATGAATCGATTCTACAACGAACTTAACGAGAAAATTGTTGAGATGCTTGTCGATCATGAAGAAATTCAACCTTGTGAGAATTTGGAAGAAATGGTGCACATTGCCATCAAGATAGAACAACTACTTCAAAGGAAACCTTCAAGGTACACTAAATCTAAATCTAGTACTAATTTAAACTCATTAGTAGAAAAAGTTAGTTTACCTACAAAATTTGAGCATTTTGATAGGGTAGGAAGTAGTAAAGAGATATTTGATATTGTCGTGTCTATGTACGATCATAATGTTTTGTCTAGTAAATAA
Protein sequence
MLHFLEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPSRYTKSKSSTNLNSLVEKVSLPTKFEHFDRVGSSKEIFDIVVSMYDHNVLSSK
Homology
BLAST of PI0001916 vs. ExPASy TrEMBL
Match:
A0A5A7UE26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001990 PE=4 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 6.3e-10
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 0
Query: 1 MLHFLEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIK 55
ML LE+MTI ED+E +NRFYN LN++ EMLVDHEEI+ CENLE+MVH+AI+
Sbjct: 12 MLQLLEKMTIYEDKEVVINRFYNGLNKESFEMLVDHEEIRCCENLEDMVHVAIR 65
BLAST of PI0001916 vs. ExPASy TrEMBL
Match:
A0A6J1G2Q3 (uncharacterized protein LOC111450286 OS=Cucurbita moschata OX=3662 GN=LOC111450286 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query: 5 LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
++ + +DED EA M RF N LN +I D ++QP N+EE++HIAIKIE+ +QR+
Sbjct: 63 MDRLELDEDMEALMARFLNGLNIEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 122
Query: 65 RYTKSKSSTNLNSLVEKVSLPTKFEH 91
RY+ SK+ N S +K S ++H
Sbjct: 123 RYS-SKTFPNSTSTWKKDSKSIDYKH 143
BLAST of PI0001916 vs. ExPASy TrEMBL
Match:
A0A6J1EVV9 (uncharacterized protein LOC111436463 OS=Cucurbita moschata OX=3662 GN=LOC111436463 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query: 5 LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
++ + +DED EA M RF N LN +I D ++QP N+EE++HIAIKIE+ +QR+
Sbjct: 63 MDRLELDEDMEALMARFLNGLNIEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 122
Query: 65 RYTKSKSSTNLNSLVEKVSLPTKFEH 91
RY+ SK+ N S +K S ++H
Sbjct: 123 RYS-SKTFPNSTSTWKKESKNIDYKH 143
BLAST of PI0001916 vs. ExPASy TrEMBL
Match:
A0A6J1EQJ1 (uncharacterized protein LOC111436530 OS=Cucurbita moschata OX=3662 GN=LOC111436530 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 2.7e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query: 5 LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
++ + +DED EA M RF N LN +I D ++QP N+EE++HIAIKIE+ +QR+
Sbjct: 63 MDRLELDEDMEALMARFLNGLNIEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 122
Query: 65 RYTKSKSSTNLNSLVEKVSLPTKFEH 91
RY+ SK+ N S +K S ++H
Sbjct: 123 RYS-SKTFPNSTSTWKKDSKNIDYKH 143
BLAST of PI0001916 vs. ExPASy TrEMBL
Match:
A0A6J1I8S0 (uncharacterized protein LOC111472489 OS=Cucurbita maxima OX=3661 GN=LOC111472489 PE=4 SV=1)
HSP 1 Score: 57.0 bits (136), Expect = 6.1e-05
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 5 LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
++ + +DED EA M RF N LN +I D ++QP N+EE++HIAIKIE+ +QR+
Sbjct: 63 MDRLELDEDMEALMARFLNGLNTEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 122
Query: 65 RYTKSKSSTNLNSLVEKVSLPTKFEH 91
RY+ SK+ N S ++ S + H
Sbjct: 123 RYS-SKTFPNSTSTWKRDSKNIDYTH 143
BLAST of PI0001916 vs. NCBI nr
Match:
KAA0051791.1 (hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa])
HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 0
Query: 1 MLHFLEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIK 55
ML LE+MTI ED+E +NRFYN LN++ EMLVDHEEI+ CENLE+MVH+AI+
Sbjct: 12 MLQLLEKMTIYEDKEVVINRFYNGLNKESFEMLVDHEEIRCCENLEDMVHVAIR 65
BLAST of PI0001916 vs. NCBI nr
Match:
XP_038887118.1 (uncharacterized protein K02A2.6-like [Benincasa hispida])
HSP 1 Score: 59.7 bits (143), Expect = 1.9e-05
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 0
Query: 5 LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
++ + +DED E M RF N LN++I D ++QP ++EEM+H+AIK+E+ L K +
Sbjct: 120 MDRLDLDEDMETLMARFLNGLNKEI----ADKVDLQPYFDIEEMLHLAIKVEKHLSTKRA 179
Query: 65 RYTKSKSSTNLNS 78
RYT SK S++LNS
Sbjct: 180 RYTSSKPSSSLNS 188
BLAST of PI0001916 vs. NCBI nr
Match:
XP_023530046.1 (uncharacterized protein LOC111792716 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query: 5 LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
++ + +DED EA M RF N LN +I D ++QP N+EE++HIAIKIE+ +QR+
Sbjct: 26 MDRLDLDEDMEALMARFLNGLNTEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 85
Query: 65 RYTKSKSSTNLNSLVEKVSLPTKFEH 91
RY+ SK+ N S +K S ++H
Sbjct: 86 RYS-SKTFPNSTSTWKKDSKNIDYKH 106
BLAST of PI0001916 vs. NCBI nr
Match:
XP_023520835.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query: 5 LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
++ + +DED EA M RF N LN +I D ++QP N+EE++HIAIKIE+ +QR+
Sbjct: 225 MDRLDLDEDMEALMARFLNGLNTEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 284
Query: 65 RYTKSKSSTNLNSLVEKVSLPTKFEH 91
RY+ SK+ N S +K S ++H
Sbjct: 285 RYS-SKTFPNSTSTWKKDSKNIDYKH 305
BLAST of PI0001916 vs. NCBI nr
Match:
XP_023553652.1 (uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query: 5 LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
++ + +DED EA M RF N LN +I D ++QP N+EE++HIAIKIE+ +QR+
Sbjct: 225 MDRLDLDEDMEALMARFLNGLNTEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 284
Query: 65 RYTKSKSSTNLNSLVEKVSLPTKFEH 91
RY+ SK+ N S +K S ++H
Sbjct: 285 RYS-SKTFPNSTSTWKKDSKNIDYKH 305
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UE26 | 6.3e-10 | 66.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1G2Q3 | 2.1e-05 | 41.86 | uncharacterized protein LOC111450286 OS=Cucurbita moschata OX=3662 GN=LOC1114502... | [more] |
A0A6J1EVV9 | 2.1e-05 | 41.86 | uncharacterized protein LOC111436463 OS=Cucurbita moschata OX=3662 GN=LOC1114364... | [more] |
A0A6J1EQJ1 | 2.7e-05 | 41.86 | uncharacterized protein LOC111436530 OS=Cucurbita moschata OX=3662 GN=LOC1114365... | [more] |
A0A6J1I8S0 | 6.1e-05 | 40.70 | uncharacterized protein LOC111472489 OS=Cucurbita maxima OX=3661 GN=LOC111472489... | [more] |
Match Name | E-value | Identity | Description | |
KAA0051791.1 | 1.3e-09 | 66.67 | hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa] | [more] |
XP_038887118.1 | 1.9e-05 | 45.21 | uncharacterized protein K02A2.6-like [Benincasa hispida] | [more] |
XP_023530046.1 | 3.3e-05 | 41.86 | uncharacterized protein LOC111792716 [Cucurbita pepo subsp. pepo] | [more] |
XP_023520835.1 | 3.3e-05 | 41.86 | LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp.... | [more] |
XP_023553652.1 | 3.3e-05 | 41.86 | uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |