PI0001916 (gene) Melon (PI 482460) v1

Overview
NamePI0001916
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111469948
Locationchr10: 10019242 .. 10019592 (-)
RNA-Seq ExpressionPI0001916
SyntenyPI0001916
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCACTTTCTTGAGGAAATGACCATAGACGAGGATGAGGAAGCTACCATGAATCGATTCTACAACGAACTTAACGAGAAAATTGTTGAGATGCTTGTCGATCATGAAGAAATTCAACCTTGTGAGAATTTGGAAGAAATGGTGCACATTGCCATCAAGATAGAACAACTACTTCAAAGGAAACCTTCAAGGTACACTAAATCTAAATCTAGTACTAATTTAAACTCATTAGTAGAAAAAGTTAGTTTACCTACAAAATTTGAGCATTTTGATAGGGTAGGAAGTAGTAAAGAGATATTTGATATTGTCGTGTCTATGTACGATCATAATGTTTTGTCTAGTAAATAA

mRNA sequence

ATGTTGCACTTTCTTGAGGAAATGACCATAGACGAGGATGAGGAAGCTACCATGAATCGATTCTACAACGAACTTAACGAGAAAATTGTTGAGATGCTTGTCGATCATGAAGAAATTCAACCTTGTGAGAATTTGGAAGAAATGGTGCACATTGCCATCAAGATAGAACAACTACTTCAAAGGAAACCTTCAAGGTACACTAAATCTAAATCTAGTACTAATTTAAACTCATTAGTAGAAAAAGTTAGTTTACCTACAAAATTTGAGCATTTTGATAGGGTAGGAAGTAGTAAAGAGATATTTGATATTGTCGTGTCTATGTACGATCATAATGTTTTGTCTAGTAAATAA

Coding sequence (CDS)

ATGTTGCACTTTCTTGAGGAAATGACCATAGACGAGGATGAGGAAGCTACCATGAATCGATTCTACAACGAACTTAACGAGAAAATTGTTGAGATGCTTGTCGATCATGAAGAAATTCAACCTTGTGAGAATTTGGAAGAAATGGTGCACATTGCCATCAAGATAGAACAACTACTTCAAAGGAAACCTTCAAGGTACACTAAATCTAAATCTAGTACTAATTTAAACTCATTAGTAGAAAAAGTTAGTTTACCTACAAAATTTGAGCATTTTGATAGGGTAGGAAGTAGTAAAGAGATATTTGATATTGTCGTGTCTATGTACGATCATAATGTTTTGTCTAGTAAATAA

Protein sequence

MLHFLEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPSRYTKSKSSTNLNSLVEKVSLPTKFEHFDRVGSSKEIFDIVVSMYDHNVLSSK
Homology
BLAST of PI0001916 vs. ExPASy TrEMBL
Match: A0A5A7UE26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001990 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.3e-10
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 0

Query: 1  MLHFLEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIK 55
          ML  LE+MTI ED+E  +NRFYN LN++  EMLVDHEEI+ CENLE+MVH+AI+
Sbjct: 12 MLQLLEKMTIYEDKEVVINRFYNGLNKESFEMLVDHEEIRCCENLEDMVHVAIR 65

BLAST of PI0001916 vs. ExPASy TrEMBL
Match: A0A6J1G2Q3 (uncharacterized protein LOC111450286 OS=Cucurbita moschata OX=3662 GN=LOC111450286 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 5   LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
           ++ + +DED EA M RF N LN +I     D  ++QP  N+EE++HIAIKIE+ +QR+  
Sbjct: 63  MDRLELDEDMEALMARFLNGLNIEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 122

Query: 65  RYTKSKSSTNLNSLVEKVSLPTKFEH 91
           RY+ SK+  N  S  +K S    ++H
Sbjct: 123 RYS-SKTFPNSTSTWKKDSKSIDYKH 143

BLAST of PI0001916 vs. ExPASy TrEMBL
Match: A0A6J1EVV9 (uncharacterized protein LOC111436463 OS=Cucurbita moschata OX=3662 GN=LOC111436463 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 5   LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
           ++ + +DED EA M RF N LN +I     D  ++QP  N+EE++HIAIKIE+ +QR+  
Sbjct: 63  MDRLELDEDMEALMARFLNGLNIEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 122

Query: 65  RYTKSKSSTNLNSLVEKVSLPTKFEH 91
           RY+ SK+  N  S  +K S    ++H
Sbjct: 123 RYS-SKTFPNSTSTWKKESKNIDYKH 143

BLAST of PI0001916 vs. ExPASy TrEMBL
Match: A0A6J1EQJ1 (uncharacterized protein LOC111436530 OS=Cucurbita moschata OX=3662 GN=LOC111436530 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.7e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 5   LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
           ++ + +DED EA M RF N LN +I     D  ++QP  N+EE++HIAIKIE+ +QR+  
Sbjct: 63  MDRLELDEDMEALMARFLNGLNIEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 122

Query: 65  RYTKSKSSTNLNSLVEKVSLPTKFEH 91
           RY+ SK+  N  S  +K S    ++H
Sbjct: 123 RYS-SKTFPNSTSTWKKDSKNIDYKH 143

BLAST of PI0001916 vs. ExPASy TrEMBL
Match: A0A6J1I8S0 (uncharacterized protein LOC111472489 OS=Cucurbita maxima OX=3661 GN=LOC111472489 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.1e-05
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 0

Query: 5   LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
           ++ + +DED EA M RF N LN +I     D  ++QP  N+EE++HIAIKIE+ +QR+  
Sbjct: 63  MDRLELDEDMEALMARFLNGLNTEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 122

Query: 65  RYTKSKSSTNLNSLVEKVSLPTKFEH 91
           RY+ SK+  N  S  ++ S    + H
Sbjct: 123 RYS-SKTFPNSTSTWKRDSKNIDYTH 143

BLAST of PI0001916 vs. NCBI nr
Match: KAA0051791.1 (hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 0

Query: 1  MLHFLEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIK 55
          ML  LE+MTI ED+E  +NRFYN LN++  EMLVDHEEI+ CENLE+MVH+AI+
Sbjct: 12 MLQLLEKMTIYEDKEVVINRFYNGLNKESFEMLVDHEEIRCCENLEDMVHVAIR 65

BLAST of PI0001916 vs. NCBI nr
Match: XP_038887118.1 (uncharacterized protein K02A2.6-like [Benincasa hispida])

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-05
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 0

Query: 5   LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
           ++ + +DED E  M RF N LN++I     D  ++QP  ++EEM+H+AIK+E+ L  K +
Sbjct: 120 MDRLDLDEDMETLMARFLNGLNKEI----ADKVDLQPYFDIEEMLHLAIKVEKHLSTKRA 179

Query: 65  RYTKSKSSTNLNS 78
           RYT SK S++LNS
Sbjct: 180 RYTSSKPSSSLNS 188

BLAST of PI0001916 vs. NCBI nr
Match: XP_023530046.1 (uncharacterized protein LOC111792716 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 5   LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
           ++ + +DED EA M RF N LN +I     D  ++QP  N+EE++HIAIKIE+ +QR+  
Sbjct: 26  MDRLDLDEDMEALMARFLNGLNTEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 85

Query: 65  RYTKSKSSTNLNSLVEKVSLPTKFEH 91
           RY+ SK+  N  S  +K S    ++H
Sbjct: 86  RYS-SKTFPNSTSTWKKDSKNIDYKH 106

BLAST of PI0001916 vs. NCBI nr
Match: XP_023520835.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 5   LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
           ++ + +DED EA M RF N LN +I     D  ++QP  N+EE++HIAIKIE+ +QR+  
Sbjct: 225 MDRLDLDEDMEALMARFLNGLNTEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 284

Query: 65  RYTKSKSSTNLNSLVEKVSLPTKFEH 91
           RY+ SK+  N  S  +K S    ++H
Sbjct: 285 RYS-SKTFPNSTSTWKKDSKNIDYKH 305

BLAST of PI0001916 vs. NCBI nr
Match: XP_023553652.1 (uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 5   LEEMTIDEDEEATMNRFYNELNEKIVEMLVDHEEIQPCENLEEMVHIAIKIEQLLQRKPS 64
           ++ + +DED EA M RF N LN +I     D  ++QP  N+EE++HIAIKIE+ +QR+  
Sbjct: 225 MDRLDLDEDMEALMARFLNGLNTEI----ADKTDLQPYSNIEELLHIAIKIERQIQRRSQ 284

Query: 65  RYTKSKSSTNLNSLVEKVSLPTKFEH 91
           RY+ SK+  N  S  +K S    ++H
Sbjct: 285 RYS-SKTFPNSTSTWKKDSKNIDYKH 305

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UE266.3e-1066.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1G2Q32.1e-0541.86uncharacterized protein LOC111450286 OS=Cucurbita moschata OX=3662 GN=LOC1114502... [more]
A0A6J1EVV92.1e-0541.86uncharacterized protein LOC111436463 OS=Cucurbita moschata OX=3662 GN=LOC1114364... [more]
A0A6J1EQJ12.7e-0541.86uncharacterized protein LOC111436530 OS=Cucurbita moschata OX=3662 GN=LOC1114365... [more]
A0A6J1I8S06.1e-0540.70uncharacterized protein LOC111472489 OS=Cucurbita maxima OX=3661 GN=LOC111472489... [more]
Match NameE-valueIdentityDescription
KAA0051791.11.3e-0966.67hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa][more]
XP_038887118.11.9e-0545.21uncharacterized protein K02A2.6-like [Benincasa hispida][more]
XP_023530046.13.3e-0541.86uncharacterized protein LOC111792716 [Cucurbita pepo subsp. pepo][more]
XP_023520835.13.3e-0541.86LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp.... [more]
XP_023553652.13.3e-0541.86uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001916.1PI0001916.1mRNA