Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTTACTCCATCACAAGCTTTCGCCGAATCATCAATCTCCACAAAAACAAAAAAAAAAGGCAAAAAAGAGGATGATGAAGTGGAGATTGATGAAGAGGAAATGGAAAGTCCAACGTCTGTCCCACTAATTCGCAAAAGGAAAAGCGAGGGAGAGGCCTCCTCTGGGTCAAAGACGAAAAAGAAACATACGGCCAAGAACCCTAGTGACCATTTTCCCCTTGCGATAGAAAGCCCGCATGGCCACCAAACGCCCAAGTCCACCATCTCGTCTTCACCTCCCAAAGCCATCAAAGCAGCACCACTTCCCCCCATAATCCAAATTCCTTCCCCTAAAAAATTCAAAACGCCAAGCCCTCTCCACCAAATCCAAATATTCACCACTACTACTATTCCTCGGCAGCAAAAGGAAAATCATCGATCTCTTGTCACACAAGCCCTTGATCAAACCACCACCTCGCCAAAAAAAGATCTTGAATCACATTTAACCAAGGGATTGATGATTTCATACAAGACCTTTGCAATCCAGATTTTGATATTAAAGAAGTAAGGGATCAAGAGGACGTGACCCTAGTTCCTGTTAGGTGGCAAAATGAAGATGTCTTGGAGGAGCCAATTGATGATCCACTCCCCAAAGGTAAGGAAATCGCCTTTAAGGAAGCTAGTGAAACGCAAGCTCCCTAGTCGCCTAAACAAATCGAAGATCAGCAAGGTGATGCGGTAGGAGAGAATGAAGACGATGATTTCTATAAGTTCATCAATGACGCGATTGGAAAGTCAATGATGGATGAACTTGAAGACATCTTCCAAAATCAAGCCAATCTGCAAAAAGACGCAATGAGACATGAGAAGCAGATTTTGGACTTGGAGTTAAAAGTTTCAATCATCATCAAGAGCAACATGATCAACTCGCCTCTGAGGTTGCGAGCTTAA
mRNA sequence
ATGACTTTTACTCCATCACAAGCTTTCGCCGAATCATCAATCTCCACAAAAACAAAAAAAAAAGGCAAAAAAGAGGATGATGAAGTGGAGATTGATGAAGAGGAAATGGAAAGTCCAACGTCTGTCCCACTAATTCGCAAAAGGAAAAGCGAGGGAGAGGCCTCCTCTGGGTCAAAGACGAAAAAGAAACATACGGCCAAGAACCCTAGTGACCATTTTCCCCTTGCGATAGAAAGCCCGCATGGCCACCAAACGCCCAAGTCCACCATCTCGTCTTCACCTCCCAAAGCCATCAAAGCAGCACCACTTCCCCCCATAATCCAAATTCCTTCCCCTAAAAAATTCAAAACGCCAAGCCCTCTCCACCAAATCCAAATATTCACCACTACTACTATTCCTCGGCAGCAAAAGGAAAATCATCGATCTCTTGTCACACAAGCCCTTGATCAAACCACCACCTCGCCAAAAAAAGATCTTGAATCACATTTAACCAAGGGATTGATGATTTCATACAAGACCTTTGCAATCCAGATTTTGATATTAAAGAAGGATCAAGAGGACGTGACCCTAGTTCCTGTTAGGTGGCAAAATGAAGATGTCTTGGAGGAGCCAATTGATGATCCACTCCCCAAAGATCAGCAAGGTGATGCGGTAGGAGAGAATGAAGACGATGATTTCTATAAGTTCATCAATGACGCGATTGGAAAGTCAATGATGGATGAACTTGAAGACATCTTCCAAAATCAAGCCAATCTGCAAAAAGACGCAATGAGACATGAGAAGCAGATTTTGGACTTGGAGTTAAAAGTTTCAATCATCATCAAGAGCAACATGATCAACTCGCCTCTGAGGTTGCGAGCTTAA
Coding sequence (CDS)
ATGACTTTTACTCCATCACAAGCTTTCGCCGAATCATCAATCTCCACAAAAACAAAAAAAAAAGGCAAAAAAGAGGATGATGAAGTGGAGATTGATGAAGAGGAAATGGAAAGTCCAACGTCTGTCCCACTAATTCGCAAAAGGAAAAGCGAGGGAGAGGCCTCCTCTGGGTCAAAGACGAAAAAGAAACATACGGCCAAGAACCCTAGTGACCATTTTCCCCTTGCGATAGAAAGCCCGCATGGCCACCAAACGCCCAAGTCCACCATCTCGTCTTCACCTCCCAAAGCCATCAAAGCAGCACCACTTCCCCCCATAATCCAAATTCCTTCCCCTAAAAAATTCAAAACGCCAAGCCCTCTCCACCAAATCCAAATATTCACCACTACTACTATTCCTCGGCAGCAAAAGGAAAATCATCGATCTCTTGTCACACAAGCCCTTGATCAAACCACCACCTCGCCAAAAAAAGATCTTGAATCACATTTAACCAAGGGATTGATGATTTCATACAAGACCTTTGCAATCCAGATTTTGATATTAAAGAAGGATCAAGAGGACGTGACCCTAGTTCCTGTTAGGTGGCAAAATGAAGATGTCTTGGAGGAGCCAATTGATGATCCACTCCCCAAAGATCAGCAAGGTGATGCGGTAGGAGAGAATGAAGACGATGATTTCTATAAGTTCATCAATGACGCGATTGGAAAGTCAATGATGGATGAACTTGAAGACATCTTCCAAAATCAAGCCAATCTGCAAAAAGACGCAATGAGACATGAGAAGCAGATTTTGGACTTGGAGTTAAAAGTTTCAATCATCATCAAGAGCAACATGATCAACTCGCCTCTGAGGTTGCGAGCTTAA
Protein sequence
MTFTPSQAFAESSISTKTKKKGKKEDDEVEIDEEEMESPTSVPLIRKRKSEGEASSGSKTKKKHTAKNPSDHFPLAIESPHGHQTPKSTISSSPPKAIKAAPLPPIIQIPSPKKFKTPSPLHQIQIFTTTTIPRQQKENHRSLVTQALDQTTTSPKKDLESHLTKGLMISYKTFAIQILILKKDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGDAVGENEDDDFYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELKVSIIIKSNMINSPLRLRA
Homology
BLAST of PI0000883 vs. ExPASy TrEMBL
Match:
A0A5A7U0L9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00960 PE=4 SV=1)
HSP 1 Score: 65.1 bits (157), Expect = 5.5e-07
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 208 PLP----KDQQGDAVGENEDDD-FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQ 267
PLP +QQ +A GE++++D ++KFI D GK +MD +D+FQNQ +LQ+ RHEKQ
Sbjct: 17 PLPLKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQ 76
Query: 268 ILDLELKV 271
I DLELK+
Sbjct: 77 IQDLELKI 84
BLAST of PI0000883 vs. ExPASy TrEMBL
Match:
A0A5A7VP61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00820 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 3.0e-05
Identity = 64/154 (41.56%), Postives = 76/154 (49.35%), Query Frame = 0
Query: 11 ESSISTKTKKKGKKE-DDEVEIDEEEMESPTSVPLIRKRKSEGEASSGSKTKKKHTAKNP 70
E + KTKK+G+ DEVE EEE VPL RKRK E E SS K K + AK+
Sbjct: 40 EKTKCLKTKKEGQTTVVDEVETKEEEEREDKQVPLKRKRKGEEEDSS-LKEKMRLKAKDS 99
Query: 71 SDHFPLAIESPHGHQTPKSTIS-----------SSPPKAIKAAPLPPI-IQIPSPKKFKT 130
D LA+ QTPK TIS S P PLP I Q PS K K+
Sbjct: 100 RDPLYLALTIVPQDQTPKETISLPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKS 159
Query: 131 PSPLHQIQIFTTTTIPRQQKENHRSLVTQALDQT 152
PSP H+IQ T T +QK+ ++LV LD T
Sbjct: 160 PSPSHKIQ---THTFLMRQKDTFQTLVVTLLDPT 189
BLAST of PI0000883 vs. ExPASy TrEMBL
Match:
A0A5D3E1H0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G00350 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 8.8e-05
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGD-------------------------- 242
K+ E+ TL V N+++LE+ IDDPL K +Q D
Sbjct: 71 KESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQ 130
Query: 243 --AVGENEDDD--FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELK 270
A+ +++DDD ++KFIN+ + + + ED+FQ QANLQ+ ++++K + DLELK
Sbjct: 131 KEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQLQNQKPLQDLELK 187
BLAST of PI0000883 vs. ExPASy TrEMBL
Match:
A0A5A7TJU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00130 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 8.8e-05
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGD-------------------------- 242
K+ E+ TL V N+++LE+ IDDPL K +Q D
Sbjct: 116 KESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQ 175
Query: 243 --AVGENEDDD--FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELK 270
A+ +++DDD ++KFIN+ + + + ED+FQ QANLQ+ ++++K + DLELK
Sbjct: 176 KEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQLQNQKPLQDLELK 232
BLAST of PI0000883 vs. ExPASy TrEMBL
Match:
A0A5D3D8Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00610 PE=4 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 0
Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPL-------------------PKD---QQGDAVGE 242
K+ EDV+LVPV ++VLE+ +DDPL PK+ Q A
Sbjct: 23 KNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPKETSKQHDTAKES 82
Query: 243 NEDDDFYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEK 262
+E D+++KFI + GK M D ED+FQ QAN Q+ +R EK
Sbjct: 83 DEKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSEK 123
BLAST of PI0000883 vs. NCBI nr
Match:
KAA0047757.1 (hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK02391.1 hypothetical protein E5676_scaffold155G00960 [Cucumis melo var. makuwa])
HSP 1 Score: 65.1 bits (157), Expect = 1.1e-06
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 208 PLP----KDQQGDAVGENEDDD-FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQ 267
PLP +QQ +A GE++++D ++KFI D GK +MD +D+FQNQ +LQ+ RHEKQ
Sbjct: 17 PLPLKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQ 76
Query: 268 ILDLELKV 271
I DLELK+
Sbjct: 77 IQDLELKI 84
BLAST of PI0000883 vs. NCBI nr
Match:
KAA0067069.1 (hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK26305.1 hypothetical protein E5676_scaffold14G00820 [Cucumis melo var. makuwa])
HSP 1 Score: 59.3 bits (142), Expect = 6.3e-05
Identity = 64/154 (41.56%), Postives = 76/154 (49.35%), Query Frame = 0
Query: 11 ESSISTKTKKKGKKE-DDEVEIDEEEMESPTSVPLIRKRKSEGEASSGSKTKKKHTAKNP 70
E + KTKK+G+ DEVE EEE VPL RKRK E E SS K K + AK+
Sbjct: 40 EKTKCLKTKKEGQTTVVDEVETKEEEEREDKQVPLKRKRKGEEEDSS-LKEKMRLKAKDS 99
Query: 71 SDHFPLAIESPHGHQTPKSTIS-----------SSPPKAIKAAPLPPI-IQIPSPKKFKT 130
D LA+ QTPK TIS S P PLP I Q PS K K+
Sbjct: 100 RDPLYLALTIVPQDQTPKETISLPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKS 159
Query: 131 PSPLHQIQIFTTTTIPRQQKENHRSLVTQALDQT 152
PSP H+IQ T T +QK+ ++LV LD T
Sbjct: 160 PSPSHKIQ---THTFLMRQKDTFQTLVVTLLDPT 189
BLAST of PI0000883 vs. NCBI nr
Match:
TYK29776.1 (hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 57.8 bits (138), Expect = 1.8e-04
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGD-------------------------- 242
K+ E+ TL V N+++LE+ IDDPL K +Q D
Sbjct: 71 KESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQ 130
Query: 243 --AVGENEDDD--FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELK 270
A+ +++DDD ++KFIN+ + + + ED+FQ QANLQ+ ++++K + DLELK
Sbjct: 131 KEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQLQNQKPLQDLELK 187
BLAST of PI0000883 vs. NCBI nr
Match:
KAA0043584.1 (hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa])
HSP 1 Score: 57.8 bits (138), Expect = 1.8e-04
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGD-------------------------- 242
K+ E+ TL V N+++LE+ IDDPL K +Q D
Sbjct: 116 KESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQ 175
Query: 243 --AVGENEDDD--FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELK 270
A+ +++DDD ++KFIN+ + + + ED+FQ QANLQ+ ++++K + DLELK
Sbjct: 176 KEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQLQNQKPLQDLELK 232
BLAST of PI0000883 vs. NCBI nr
Match:
KAA0038296.1 (hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa])
HSP 1 Score: 57.4 bits (137), Expect = 2.4e-04
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0
Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPL-------------------PKD--QQGDAVGEN 242
K+ EDV+LVPV ++VLE+ +DDPL PK+ +Q D E+
Sbjct: 23 KNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPKETSKQHDTAKES 82
Query: 243 ED-DDFYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEK 262
+D D+++KFI + GK M D ED+FQ QAN Q+ +R +K
Sbjct: 83 DDKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSQK 123
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7U0L9 | 5.5e-07 | 51.47 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7VP61 | 3.0e-05 | 41.56 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3E1H0 | 8.8e-05 | 33.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7TJU0 | 8.8e-05 | 33.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3D8Q5 | 1.2e-04 | 38.61 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0047757.1 | 1.1e-06 | 51.47 | hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK023... | [more] |
| KAA0067069.1 | 6.3e-05 | 41.56 | hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK2630... | [more] |
| TYK29776.1 | 1.8e-04 | 33.33 | hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa] | [more] |
| KAA0043584.1 | 1.8e-04 | 33.33 | hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa] | [more] |
| KAA0038296.1 | 2.4e-04 | 38.61 | hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
