PI0000883.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0000883.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 23298433 .. 23299367 (-)
Sequence length	864
RNA-Seq Expression	PI0000883.1
Synteny	PI0000883.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTTTACTCCATCACAAGCTTTCGCCGAATCATCAATCTCCACAAAAACAAAAAAAAAAGGCAAAAAAGAGGATGATGAAGTGGAGATTGATGAAGAGGAAATGGAAAGTCCAACGTCTGTCCCACTAATTCGCAAAAGGAAAAGCGAGGGAGAGGCCTCCTCTGGGTCAAAGACGAAAAAGAAACATACGGCCAAGAACCCTAGTGACCATTTTCCCCTTGCGATAGAAAGCCCGCATGGCCACCAAACGCCCAAGTCCACCATCTCGTCTTCACCTCCCAAAGCCATCAAAGCAGCACCACTTCCCCCCATAATCCAAATTCCTTCCCCTAAAAAATTCAAAACGCCAAGCCCTCTCCACCAAATCCAAATATTCACCACTACTACTATTCCTCGGCAGCAAAAGGAAAATCATCGATCTCTTGTCACACAAGCCCTTGATCAAACCACCACCTCGCCAAAAAAAGATCTTGAATCACATTTAACCAAGGGATTGATGATTTCATACAAGACCTTTGCAATCCAGATTTTGATATTAAAGAAGTAAGGGATCAAGAGGACGTGACCCTAGTTCCTGTTAGGTGGCAAAATGAAGATGTCTTGGAGGAGCCAATTGATGATCCACTCCCCAAAGGTAAGGAAATCGCCTTTAAGGAAGCTAGTGAAACGCAAGCTCCCTAGTCGCCTAAACAAATCGAAGATCAGCAAGGTGATGCGGTAGGAGAGAATGAAGACGATGATTTCTATAAGTTCATCAATGACGCGATTGGAAAGTCAATGATGGATGAACTTGAAGACATCTTCCAAAATCAAGCCAATCTGCAAAAAGACGCAATGAGACATGAGAAGCAGATTTTGGACTTGGAGTTAAAAGTTTCAATCATCATCAAGAGCAACATGATCAACTCGCCTCTGAGGTTGCGAGCTTAA

mRNA sequence

ATGACTTTTACTCCATCACAAGCTTTCGCCGAATCATCAATCTCCACAAAAACAAAAAAAAAAGGCAAAAAAGAGGATGATGAAGTGGAGATTGATGAAGAGGAAATGGAAAGTCCAACGTCTGTCCCACTAATTCGCAAAAGGAAAAGCGAGGGAGAGGCCTCCTCTGGGTCAAAGACGAAAAAGAAACATACGGCCAAGAACCCTAGTGACCATTTTCCCCTTGCGATAGAAAGCCCGCATGGCCACCAAACGCCCAAGTCCACCATCTCGTCTTCACCTCCCAAAGCCATCAAAGCAGCACCACTTCCCCCCATAATCCAAATTCCTTCCCCTAAAAAATTCAAAACGCCAAGCCCTCTCCACCAAATCCAAATATTCACCACTACTACTATTCCTCGGCAGCAAAAGGAAAATCATCGATCTCTTGTCACACAAGCCCTTGATCAAACCACCACCTCGCCAAAAAAAGATCTTGAATCACATTTAACCAAGGGATTGATGATTTCATACAAGACCTTTGCAATCCAGATTTTGATATTAAAGAAGGATCAAGAGGACGTGACCCTAGTTCCTGTTAGGTGGCAAAATGAAGATGTCTTGGAGGAGCCAATTGATGATCCACTCCCCAAAGATCAGCAAGGTGATGCGGTAGGAGAGAATGAAGACGATGATTTCTATAAGTTCATCAATGACGCGATTGGAAAGTCAATGATGGATGAACTTGAAGACATCTTCCAAAATCAAGCCAATCTGCAAAAAGACGCAATGAGACATGAGAAGCAGATTTTGGACTTGGAGTTAAAAGTTTCAATCATCATCAAGAGCAACATGATCAACTCGCCTCTGAGGTTGCGAGCTTAA

Coding sequence (CDS)

ATGACTTTTACTCCATCACAAGCTTTCGCCGAATCATCAATCTCCACAAAAACAAAAAAAAAAGGCAAAAAAGAGGATGATGAAGTGGAGATTGATGAAGAGGAAATGGAAAGTCCAACGTCTGTCCCACTAATTCGCAAAAGGAAAAGCGAGGGAGAGGCCTCCTCTGGGTCAAAGACGAAAAAGAAACATACGGCCAAGAACCCTAGTGACCATTTTCCCCTTGCGATAGAAAGCCCGCATGGCCACCAAACGCCCAAGTCCACCATCTCGTCTTCACCTCCCAAAGCCATCAAAGCAGCACCACTTCCCCCCATAATCCAAATTCCTTCCCCTAAAAAATTCAAAACGCCAAGCCCTCTCCACCAAATCCAAATATTCACCACTACTACTATTCCTCGGCAGCAAAAGGAAAATCATCGATCTCTTGTCACACAAGCCCTTGATCAAACCACCACCTCGCCAAAAAAAGATCTTGAATCACATTTAACCAAGGGATTGATGATTTCATACAAGACCTTTGCAATCCAGATTTTGATATTAAAGAAGGATCAAGAGGACGTGACCCTAGTTCCTGTTAGGTGGCAAAATGAAGATGTCTTGGAGGAGCCAATTGATGATCCACTCCCCAAAGATCAGCAAGGTGATGCGGTAGGAGAGAATGAAGACGATGATTTCTATAAGTTCATCAATGACGCGATTGGAAAGTCAATGATGGATGAACTTGAAGACATCTTCCAAAATCAAGCCAATCTGCAAAAAGACGCAATGAGACATGAGAAGCAGATTTTGGACTTGGAGTTAAAAGTTTCAATCATCATCAAGAGCAACATGATCAACTCGCCTCTGAGGTTGCGAGCTTAA

Protein sequence

MTFTPSQAFAESSISTKTKKKGKKEDDEVEIDEEEMESPTSVPLIRKRKSEGEASSGSKTKKKHTAKNPSDHFPLAIESPHGHQTPKSTISSSPPKAIKAAPLPPIIQIPSPKKFKTPSPLHQIQIFTTTTIPRQQKENHRSLVTQALDQTTTSPKKDLESHLTKGLMISYKTFAIQILILKKDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGDAVGENEDDDFYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELKVSIIIKSNMINSPLRLRA

Homology

[Close]

BLAST of PI0000883.1 vs. ExPASy TrEMBL
Match: A0A5A7U0L9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00960 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.5e-07
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 208 PLP----KDQQGDAVGENEDDD-FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQ 267
           PLP     +QQ +A GE++++D ++KFI D  GK +MD  +D+FQNQ +LQ+   RHEKQ
Sbjct: 17  PLPLKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQ 76

Query: 268 ILDLELKV 271
           I DLELK+
Sbjct: 77  IQDLELKI 84

[Close]

BLAST of PI0000883.1 vs. ExPASy TrEMBL
Match: A0A5A7VP61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00820 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-05
Identity = 64/154 (41.56%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 11  ESSISTKTKKKGKKE-DDEVEIDEEEMESPTSVPLIRKRKSEGEASSGSKTKKKHTAKNP 70
           E +   KTKK+G+    DEVE  EEE      VPL RKRK E E SS  K K +  AK+ 
Sbjct: 40  EKTKCLKTKKEGQTTVVDEVETKEEEEREDKQVPLKRKRKGEEEDSS-LKEKMRLKAKDS 99

Query: 71  SDHFPLAIESPHGHQTPKSTIS-----------SSPPKAIKAAPLPPI-IQIPSPKKFKT 130
            D   LA+      QTPK TIS            S P      PLP I  Q PS  K K+
Sbjct: 100 RDPLYLALTIVPQDQTPKETISLPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKS 159

Query: 131 PSPLHQIQIFTTTTIPRQQKENHRSLVTQALDQT 152
           PSP H+IQ   T T   +QK+  ++LV   LD T
Sbjct: 160 PSPSHKIQ---THTFLMRQKDTFQTLVVTLLDPT 189

[Close]

BLAST of PI0000883.1 vs. ExPASy TrEMBL
Match: A0A5D3E1H0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G00350 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 8.8e-05
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGD-------------------------- 242
           K+ E+ TL  V   N+++LE+ IDDPL K +Q D                          
Sbjct: 71  KESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQ 130

Query: 243 --AVGENEDDD--FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELK 270
             A+ +++DDD  ++KFIN+ + + +    ED+FQ QANLQ+  ++++K + DLELK
Sbjct: 131 KEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQLQNQKPLQDLELK 187

[Close]

BLAST of PI0000883.1 vs. ExPASy TrEMBL
Match: A0A5A7TJU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00130 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 8.8e-05
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGD-------------------------- 242
           K+ E+ TL  V   N+++LE+ IDDPL K +Q D                          
Sbjct: 116 KESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQ 175

Query: 243 --AVGENEDDD--FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELK 270
             A+ +++DDD  ++KFIN+ + + +    ED+FQ QANLQ+  ++++K + DLELK
Sbjct: 176 KEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQLQNQKPLQDLELK 232

[Close]

BLAST of PI0000883.1 vs. ExPASy TrEMBL
Match: A0A5D3D8Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00610 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPL-------------------PKD---QQGDAVGE 242
           K+ EDV+LVPV    ++VLE+ +DDPL                   PK+   Q   A   
Sbjct: 23  KNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPKETSKQHDTAKES 82

Query: 243 NEDDDFYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEK 262
           +E D+++KFI +  GK M D  ED+FQ QAN Q+  +R EK
Sbjct: 83  DEKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSEK 123

[Close]

BLAST of PI0000883.1 vs. NCBI nr
Match: KAA0047757.1 (hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK02391.1 hypothetical protein E5676_scaffold155G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-06
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 208 PLP----KDQQGDAVGENEDDD-FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQ 267
           PLP     +QQ +A GE++++D ++KFI D  GK +MD  +D+FQNQ +LQ+   RHEKQ
Sbjct: 17  PLPLKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQ 76

Query: 268 ILDLELKV 271
           I DLELK+
Sbjct: 77  IQDLELKI 84

[Close]

BLAST of PI0000883.1 vs. NCBI nr
Match: KAA0067069.1 (hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK26305.1 hypothetical protein E5676_scaffold14G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 6.3e-05
Identity = 64/154 (41.56%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 11  ESSISTKTKKKGKKE-DDEVEIDEEEMESPTSVPLIRKRKSEGEASSGSKTKKKHTAKNP 70
           E +   KTKK+G+    DEVE  EEE      VPL RKRK E E SS  K K +  AK+ 
Sbjct: 40  EKTKCLKTKKEGQTTVVDEVETKEEEEREDKQVPLKRKRKGEEEDSS-LKEKMRLKAKDS 99

Query: 71  SDHFPLAIESPHGHQTPKSTIS-----------SSPPKAIKAAPLPPI-IQIPSPKKFKT 130
            D   LA+      QTPK TIS            S P      PLP I  Q PS  K K+
Sbjct: 100 RDPLYLALTIVPQDQTPKETISLPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKS 159

Query: 131 PSPLHQIQIFTTTTIPRQQKENHRSLVTQALDQT 152
           PSP H+IQ   T T   +QK+  ++LV   LD T
Sbjct: 160 PSPSHKIQ---THTFLMRQKDTFQTLVVTLLDPT 189

[Close]

BLAST of PI0000883.1 vs. NCBI nr
Match: TYK29776.1 (hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-04
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGD-------------------------- 242
           K+ E+ TL  V   N+++LE+ IDDPL K +Q D                          
Sbjct: 71  KESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQ 130

Query: 243 --AVGENEDDD--FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELK 270
             A+ +++DDD  ++KFIN+ + + +    ED+FQ QANLQ+  ++++K + DLELK
Sbjct: 131 KEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQLQNQKPLQDLELK 187

[Close]

BLAST of PI0000883.1 vs. NCBI nr
Match: KAA0043584.1 (hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-04
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPLPKDQQGD-------------------------- 242
           K+ E+ TL  V   N+++LE+ IDDPL K +Q D                          
Sbjct: 116 KESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQ 175

Query: 243 --AVGENEDDD--FYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEKQILDLELK 270
             A+ +++DDD  ++KFIN+ + + +    ED+FQ QANLQ+  ++++K + DLELK
Sbjct: 176 KEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQLQNQKPLQDLELK 232

[Close]

BLAST of PI0000883.1 vs. NCBI nr
Match: KAA0038296.1 (hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-04
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 183 KDQEDVTLVPVRWQNEDVLEEPIDDPL-------------------PKD--QQGDAVGEN 242
           K+ EDV+LVPV    ++VLE+ +DDPL                   PK+  +Q D   E+
Sbjct: 23  KNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPKETSKQHDTAKES 82

Query: 243 ED-DDFYKFINDAIGKSMMDELEDIFQNQANLQKDAMRHEK 262
           +D D+++KFI +  GK M D  ED+FQ QAN Q+  +R +K
Sbjct: 83  DDKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSQK 123

The following BLAST results are available for this feature:

BLAST of PI0000883.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000883.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0L9	5.5e-07	51.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VP61	3.0e-05	41.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E1H0	8.8e-05	33.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TJU0	8.8e-05	33.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D8Q5	1.2e-04	38.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0000883.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047757.1	1.1e-06	51.47	hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK023...	[more]
KAA0067069.1	6.3e-05	41.56	hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK2630...	[more]
TYK29776.1	1.8e-04	33.33	hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]	[more]
KAA0043584.1	1.8e-04	33.33	hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]	[more]
KAA0038296.1	2.4e-04	38.61	hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]	[more]

BLAST of PI0000883.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..222

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0000883	PI0000883	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0000883.1-exon	PI0000883.1-exon-chr06:23298433..23298662	exon
PI0000883.1-exon	PI0000883.1-exon-chr06:23298729..23298814	exon
PI0000883.1-exon	PI0000883.1-exon-chr06:23298820..23299367	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0000883.1-cds	PI0000883.1-cds-chr06:23298433..23298662	CDS
PI0000883.1-cds	PI0000883.1-cds-chr06:23298729..23298814	CDS
PI0000883.1-cds	PI0000883.1-cds-chr06:23298820..23299367	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0000883.1	PI0000883.1-protein	polypeptide