Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAAGAAGCGCGTCAACCTTGGCAATCTAATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGCCATGCCCTTCCCTTCCACCATTGAAGCCTTTTGCGTTAAGGCTGTGTCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAACCGCATGATCACTTGCCATGGACACAAGGAAATGGAAAGGCGAGCAAAGACTTTGGGTGACACACCTGAAGGCATGGCCCAAGTAGAACGCAAAAGGAAGTCCCCAACCGCGGCATCAACCCCCCACCTAAAGTAAAAAAATCAAGGGCTGATGTGGCGAAGCAGCCACCCCCACTGAAGATCATGCACCCCCCATCCCGCCCAATCAAGCGAGCTCCCCCACCAGTCCAAAACAAATCCAGCAACTCTCAGCCTCCCCGCCATTCTTCGCCCATCCCATCCACACCACTTTCGCCAATACTCTCTCTCTGCCATTCACCTCTCCCCCACATTCTTTCCTCTATCAACGCCCCTAACCTTTCCCCACGACCGCCTACCCCTCCGCCAACAAAATCCAATTCCCCACCCCTTCCTACAAATGAACCCTCTCCTCGGTGAACAACGCCCCTTTCGCCTCTCATCCTTTCGCCCATCATGGACCTTACCCTCATTCGCAATGACCAGCCCACGGTCGCCACTGAGGTCGTTGAGGTTTCCCCCCCCCCACCATCCATGCGGTAGACACTCCTACGCGAGCCTCTCCAATTCTCATTGTTTCAGAAGAGGACGCCCACCAACCATCAGGGTCTCACCGCCACCACCTGCTGTGGATACAGTGCAAAACGTTGATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACCACGCCCGGAGAAGATGATGATTTGGGGGAACTGATAGGTTCCCTTGTGTGTAAGCCAGTGTTTAATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGGCGATGCAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAACGCCGAAAATCTTGTGACGCTCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAGCTAAAGGAACTTTTGGCGAACAACGCTCAACTCTCTACCGTTGTATCCAACCTCTCCACTTCCGTCTCCAGTCTCATCTCCGTGGTCATCGCCCAATCTGAGATGATGCGGTAA
mRNA sequence
ATGACGAAGAAGCGCGTCAACCTTGGCAATCTAATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGCCATGCCCTTCCCTTCCACCATTGAAGCCTTTTGCGTTAAGGCTGTGTCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAACCGCATGATCACTTGCCATGGACACAAGGAAATGGAAAGGCGAGCAAAGACTTTGGGTGACACACCTGAAGGCATGGCCCAAGTAGAACGCAAAAGGAAGTCCCCAACCGCGGCATCAACCCCCCACCTAAAAAGAGGACGCCCACCAACCATCAGGGTCTCACCGCCACCACCTGCTGTGGATACAGTGCAAAACGTTGATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACCACGCCCGGAGAAGATGATGATTTGGGGGAACTGATAGGTTCCCTTGTGTGTAAGCCAGTGTTTAATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGGCGATGCAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAACGCCGAAAATCTTGTGACGCTCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAGCTAAAGGAACTTTTGGCGAACAACGCTCAACTCTCTACCGTTGTATCCAACCTCTCCACTTCCGTCTCCAGTCTCATCTCCGTGGTCATCGCCCAATCTGAGATGATGCGGTAA
Coding sequence (CDS)
ATGACGAAGAAGCGCGTCAACCTTGGCAATCTAATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGCCATGCCCTTCCCTTCCACCATTGAAGCCTTTTGCGTTAAGGCTGTGTCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAACCGCATGATCACTTGCCATGGACACAAGGAAATGGAAAGGCGAGCAAAGACTTTGGGTGACACACCTGAAGGCATGGCCCAAGTAGAACGCAAAAGGAAGTCCCCAACCGCGGCATCAACCCCCCACCTAAAAAGAGGACGCCCACCAACCATCAGGGTCTCACCGCCACCACCTGCTGTGGATACAGTGCAAAACGTTGATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACCACGCCCGGAGAAGATGATGATTTGGGGGAACTGATAGGTTCCCTTGTGTGTAAGCCAGTGTTTAATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGGCGATGCAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAACGCCGAAAATCTTGTGACGCTCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAGCTAAAGGAACTTTTGGCGAACAACGCTCAACTCTCTACCGTTGTATCCAACCTCTCCACTTCCGTCTCCAGTCTCATCTCCGTGGTCATCGCCCAATCTGAGATGATGCGGTAA
Protein sequence
MTKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRMITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKRGRPPTIRVSPPPPAVDTVQNVDDPHVKDNTPILNEVGETASSAHTTTAQPPTTPGEDDDLGELIGSLVCKPVFNYFDQVLAHQVDQAMQLQSLQNTVNQLQRPNAENLVTLASQEDINALRSELKELLANNAQLSTVVSNLSTSVSSLISVVIAQSEMMR
Homology
BLAST of PI0000718 vs. ExPASy TrEMBL
Match:
A0A5A7SLS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00080 PE=4 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 3.7e-13
Identity = 52/127 (40.94%), Postives = 71/127 (55.91%), Query Frame = 0
Query: 3 KKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMAL 62
K VNLG +I SILSWM+ P+G MPFPSTIEA C+KAV L A + PI G + +Q L
Sbjct: 9 KMVVNLGAIIRNSILSWMKTPQGIMPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATL 68
Query: 63 NRMITCHGHKEMERRAKTL---------GDTPEGMAQVERKRKSPTAASTPHLKRGRPPT 121
N+ IT H +KE ER KTL P + ++RK+ A+S+ ++
Sbjct: 69 NQTITLHQNKEEERHLKTLNKVKGEEEEASLPPPPSPLKRKKAHDNASSSKKKEKRWKQD 128
BLAST of PI0000718 vs. ExPASy TrEMBL
Match:
A0A5A7U4J2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46449G00010 PE=4 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 0
Query: 6 VNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRM 65
VNLG +I SILS M+APK MPFP TI+A C+K V L + PI +C+Q+ LN+
Sbjct: 26 VNLGAIIKNSILSSMKAPKDIMPFPFTIKALCLKEVPELSTFSQAPIFSFVCSQVTLNQT 85
Query: 66 ITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKR 109
IT H +KE +R KTL + E K SP P LKR
Sbjct: 86 ITLHQNKEEQRCLKTL-----NKVKGEEKEASP---PPPPLKR 120
BLAST of PI0000718 vs. ExPASy TrEMBL
Match:
A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 3.2e-09
Identity = 79/305 (25.90%), Postives = 112/305 (36.72%), Query Frame = 0
Query: 7 NLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRMI 66
NLG +I +I +WM PKGA FPS +E +K + L + IP + NQ LNR+I
Sbjct: 139 NLGAIIQGAIFAWMEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVI 198
Query: 67 TCHGHKEMERRAKTLG--DTPEGM--------------------------------AQVE 126
T H +KE E KTLG PEGM QV
Sbjct: 199 TFHQNKEEEYHLKTLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQLGKKLKVDATKQVA 258
Query: 127 RKRKS---------------------------PTAASTPHLKRGRP-------------- 186
++ S P + PHL P
Sbjct: 259 KENNSTHCKKVTSLPGDELLCRPYLFFPLINLPKTKTPPHLDLNEPLLVPKVVPQELIAL 318
Query: 187 ---------PTIRVSP------------PPPAVDTVQNVDDPHVKDNTPILNEVGETASS 215
P + +S P +T NVDDP K N G T+SS
Sbjct: 319 PTKGAKESIPIVVLSERDMTRNDMATVNKPQEQETQVNVDDPLSKAKHTNPNVAGMTSSS 378
BLAST of PI0000718 vs. ExPASy TrEMBL
Match:
A0A5D3CAP7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001850 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 9.4e-09
Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 0
Query: 2 TKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMA 61
TKK +NLG +I ++IL+WM P GAMPF S +E C++ + L + I G + Q
Sbjct: 71 TKKAINLGTIIQSAILTWMETPNGAMPFSSKVEKLCLRFIPSLTRYSQQDILGRVYTQSE 130
Query: 62 LNRMITCHGHKEMERRAKTLG--DTPEGMAQVERKRKSPTAASTPHLKRGRPPTIRVSPP 121
LNR+I H +K+ ER KT+G PEGM + K+ P +KR T+
Sbjct: 131 LNRVIILHQNKKEERNLKTVGRIRDPEGM---KEKKIHPLVP----VKRKVALTLMQPAN 190
Query: 122 PPAVDTVQN 129
P VD +++
Sbjct: 191 KPKVDAIKD 192
BLAST of PI0000718 vs. ExPASy TrEMBL
Match:
A0A5D3E1R7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00150 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 9.4e-09
Identity = 46/103 (44.66%), Postives = 56/103 (54.37%), Query Frame = 0
Query: 6 VNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRM 65
VNLG +I SILS M APK MPFP TI+A C+K V L + PI +C+Q LN+
Sbjct: 12 VNLGAIIKNSILSSMEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQT 71
Query: 66 ITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKR 109
I H +KE +R KTL + E K SP P LKR
Sbjct: 72 IMLHQNKEEQRCLKTL-----NKVKGEEKEASP---PPPPLKR 106
BLAST of PI0000718 vs. NCBI nr
Match:
KAA0031700.1 (hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK04412.1 hypothetical protein E5676_scaffold409G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 85.5 bits (210), Expect = 7.6e-13
Identity = 52/127 (40.94%), Postives = 71/127 (55.91%), Query Frame = 0
Query: 3 KKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMAL 62
K VNLG +I SILSWM+ P+G MPFPSTIEA C+KAV L A + PI G + +Q L
Sbjct: 9 KMVVNLGAIIRNSILSWMKTPQGIMPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATL 68
Query: 63 NRMITCHGHKEMERRAKTL---------GDTPEGMAQVERKRKSPTAASTPHLKRGRPPT 121
N+ IT H +KE ER KTL P + ++RK+ A+S+ ++
Sbjct: 69 NQTITLHQNKEEERHLKTLNKVKGEEEEASLPPPPSPLKRKKAHDNASSSKKKEKRWKQD 128
BLAST of PI0000718 vs. NCBI nr
Match:
KAA0050752.1 (hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 73.6 bits (179), Expect = 3.0e-09
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 0
Query: 6 VNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRM 65
VNLG +I SILS M+APK MPFP TI+A C+K V L + PI +C+Q+ LN+
Sbjct: 26 VNLGAIIKNSILSSMKAPKDIMPFPFTIKALCLKEVPELSTFSQAPIFSFVCSQVTLNQT 85
Query: 66 ITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKR 109
IT H +KE +R KTL + E K SP P LKR
Sbjct: 86 ITLHQNKEEQRCLKTL-----NKVKGEEKEASP---PPPPLKR 120
BLAST of PI0000718 vs. NCBI nr
Match:
KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])
HSP 1 Score: 72.4 bits (176), Expect = 6.7e-09
Identity = 79/305 (25.90%), Postives = 112/305 (36.72%), Query Frame = 0
Query: 7 NLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRMI 66
NLG +I +I +WM PKGA FPS +E +K + L + IP + NQ LNR+I
Sbjct: 139 NLGAIIQGAIFAWMEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVI 198
Query: 67 TCHGHKEMERRAKTLG--DTPEGM--------------------------------AQVE 126
T H +KE E KTLG PEGM QV
Sbjct: 199 TFHQNKEEEYHLKTLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQLGKKLKVDATKQVA 258
Query: 127 RKRKS---------------------------PTAASTPHLKRGRP-------------- 186
++ S P + PHL P
Sbjct: 259 KENNSTHCKKVTSLPGDELLCRPYLFFPLINLPKTKTPPHLDLNEPLLVPKVVPQELIAL 318
Query: 187 ---------PTIRVSP------------PPPAVDTVQNVDDPHVKDNTPILNEVGETASS 215
P + +S P +T NVDDP K N G T+SS
Sbjct: 319 PTKGAKESIPIVVLSERDMTRNDMATVNKPQEQETQVNVDDPLSKAKHTNPNVAGMTSSS 378
BLAST of PI0000718 vs. NCBI nr
Match:
KAA0047718.1 (hypothetical protein E6C27_scaffold115G002320 [Cucumis melo var. makuwa] >TYK08372.1 hypothetical protein E5676_scaffold648G001850 [Cucumis melo var. makuwa])
HSP 1 Score: 70.9 bits (172), Expect = 1.9e-08
Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 0
Query: 2 TKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMA 61
TKK +NLG +I ++IL+WM P GAMPF S +E C++ + L + I G + Q
Sbjct: 71 TKKAINLGTIIQSAILTWMETPNGAMPFSSKVEKLCLRFIPSLTRYSQQDILGRVYTQSE 130
Query: 62 LNRMITCHGHKEMERRAKTLG--DTPEGMAQVERKRKSPTAASTPHLKRGRPPTIRVSPP 121
LNR+I H +K+ ER KT+G PEGM + K+ P +KR T+
Sbjct: 131 LNRVIILHQNKKEERNLKTVGRIRDPEGM---KEKKIHPLVP----VKRKVALTLMQPAN 190
Query: 122 PPAVDTVQN 129
P VD +++
Sbjct: 191 KPKVDAIKD 192
BLAST of PI0000718 vs. NCBI nr
Match:
TYK30047.1 (hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa])
HSP 1 Score: 70.9 bits (172), Expect = 1.9e-08
Identity = 46/103 (44.66%), Postives = 56/103 (54.37%), Query Frame = 0
Query: 6 VNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRM 65
VNLG +I SILS M APK MPFP TI+A C+K V L + PI +C+Q LN+
Sbjct: 12 VNLGAIIKNSILSSMEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQT 71
Query: 66 ITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKR 109
I H +KE +R KTL + E K SP P LKR
Sbjct: 72 IMLHQNKEEQRCLKTL-----NKVKGEEKEASP---PPPPLKR 106
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SLS8 | 3.7e-13 | 40.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U4J2 | 1.4e-09 | 45.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7UFG4 | 3.2e-09 | 25.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CAP7 | 9.4e-09 | 36.43 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3E1R7 | 9.4e-09 | 44.66 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0031700.1 | 7.6e-13 | 40.94 | hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK044... | [more] |
| KAA0050752.1 | 3.0e-09 | 45.63 | hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa] | [more] |
| KAA0053237.1 | 6.7e-09 | 25.90 | hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa] | [more] |
| KAA0047718.1 | 1.9e-08 | 36.43 | hypothetical protein E6C27_scaffold115G002320 [Cucumis melo var. makuwa] >TYK083... | [more] |
| TYK30047.1 | 1.9e-08 | 44.66 | hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
