PI0000718.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0000718.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr12: 18462298 .. 18463572 (+)
Sequence length	807
RNA-Seq Expression	PI0000718.1
Synteny	PI0000718.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAAGAAGCGCGTCAACCTTGGCAATCTAATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGCCATGCCCTTCCCTTCCACCATTGAAGCCTTTTGCGTTAAGGCTGTGTCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAACCGCATGATCACTTGCCATGGACACAAGGAAATGGAAAGGCGAGCAAAGACTTTGGGTGACACACCTGAAGGCATGGCCCAAGTAGAACGCAAAAGGAAGTCCCCAACCGCGGCATCAACCCCCCACCTAAAGTAAAAAAATCAAGGGCTGATGTGGCGAAGCAGCCACCCCCACTGAAGATCATGCACCCCCCATCCCGCCCAATCAAGCGAGCTCCCCCACCAGTCCAAAACAAATCCAGCAACTCTCAGCCTCCCCGCCATTCTTCGCCCATCCCATCCACACCACTTTCGCCAATACTCTCTCTCTGCCATTCACCTCTCCCCCACATTCTTTCCTCTATCAACGCCCCTAACCTTTCCCCACGACCGCCTACCCCTCCGCCAACAAAATCCAATTCCCCACCCCTTCCTACAAATGAACCCTCTCCTCGGTGAACAACGCCCCTTTCGCCTCTCATCCTTTCGCCCATCATGGACCTTACCCTCATTCGCAATGACCAGCCCACGGTCGCCACTGAGGTCGTTGAGGTTTCCCCCCCCCCACCATCCATGCGGTAGACACTCCTACGCGAGCCTCTCCAATTCTCATTGTTTCAGAAGAGGACGCCCACCAACCATCAGGGTCTCACCGCCACCACCTGCTGTGGATACAGTGCAAAACGTTGATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACCACGCCCGGAGAAGATGATGATTTGGGGGAACTGATAGGTTCCCTTGTGTGTAAGCCAGTGTTTAATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGGCGATGCAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAACGCCGAAAATCTTGTGACGCTCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAGCTAAAGGAACTTTTGGCGAACAACGCTCAACTCTCTACCGTTGTATCCAACCTCTCCACTTCCGTCTCCAGTCTCATCTCCGTGGTCATCGCCCAATCTGAGATGATGCGGTAA

mRNA sequence

ATGACGAAGAAGCGCGTCAACCTTGGCAATCTAATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGCCATGCCCTTCCCTTCCACCATTGAAGCCTTTTGCGTTAAGGCTGTGTCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAACCGCATGATCACTTGCCATGGACACAAGGAAATGGAAAGGCGAGCAAAGACTTTGGGTGACACACCTGAAGGCATGGCCCAAGTAGAACGCAAAAGGAAGTCCCCAACCGCGGCATCAACCCCCCACCTAAAAAGAGGACGCCCACCAACCATCAGGGTCTCACCGCCACCACCTGCTGTGGATACAGTGCAAAACGTTGATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACCACGCCCGGAGAAGATGATGATTTGGGGGAACTGATAGGTTCCCTTGTGTGTAAGCCAGTGTTTAATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGGCGATGCAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAACGCCGAAAATCTTGTGACGCTCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAGCTAAAGGAACTTTTGGCGAACAACGCTCAACTCTCTACCGTTGTATCCAACCTCTCCACTTCCGTCTCCAGTCTCATCTCCGTGGTCATCGCCCAATCTGAGATGATGCGGTAA

Coding sequence (CDS)

ATGACGAAGAAGCGCGTCAACCTTGGCAATCTAATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGCCATGCCCTTCCCTTCCACCATTGAAGCCTTTTGCGTTAAGGCTGTGTCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAACCGCATGATCACTTGCCATGGACACAAGGAAATGGAAAGGCGAGCAAAGACTTTGGGTGACACACCTGAAGGCATGGCCCAAGTAGAACGCAAAAGGAAGTCCCCAACCGCGGCATCAACCCCCCACCTAAAAAGAGGACGCCCACCAACCATCAGGGTCTCACCGCCACCACCTGCTGTGGATACAGTGCAAAACGTTGATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACCACGCCCGGAGAAGATGATGATTTGGGGGAACTGATAGGTTCCCTTGTGTGTAAGCCAGTGTTTAATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGGCGATGCAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAACGCCGAAAATCTTGTGACGCTCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAGCTAAAGGAACTTTTGGCGAACAACGCTCAACTCTCTACCGTTGTATCCAACCTCTCCACTTCCGTCTCCAGTCTCATCTCCGTGGTCATCGCCCAATCTGAGATGATGCGGTAA

Protein sequence

MTKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRMITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKRGRPPTIRVSPPPPAVDTVQNVDDPHVKDNTPILNEVGETASSAHTTTAQPPTTPGEDDDLGELIGSLVCKPVFNYFDQVLAHQVDQAMQLQSLQNTVNQLQRPNAENLVTLASQEDINALRSELKELLANNAQLSTVVSNLSTSVSSLISVVIAQSEMMR

Homology

[Close]

BLAST of PI0000718.1 vs. ExPASy TrEMBL
Match: A0A5A7SLS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00080 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-13
Identity = 52/127 (40.94%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 3   KKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMAL 62
           K  VNLG +I  SILSWM+ P+G MPFPSTIEA C+KAV  L A +  PI G + +Q  L
Sbjct: 9   KMVVNLGAIIRNSILSWMKTPQGIMPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATL 68

Query: 63  NRMITCHGHKEMERRAKTL---------GDTPEGMAQVERKRKSPTAASTPHLKRGRPPT 121
           N+ IT H +KE ER  KTL            P   + ++RK+    A+S+   ++     
Sbjct: 69  NQTITLHQNKEEERHLKTLNKVKGEEEEASLPPPPSPLKRKKAHDNASSSKKKEKRWKQD 128

[Close]

BLAST of PI0000718.1 vs. ExPASy TrEMBL
Match: A0A5A7U4J2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46449G00010 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 6   VNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRM 65
           VNLG +I  SILS M+APK  MPFP TI+A C+K V  L   +  PI   +C+Q+ LN+ 
Sbjct: 26  VNLGAIIKNSILSSMKAPKDIMPFPFTIKALCLKEVPELSTFSQAPIFSFVCSQVTLNQT 85

Query: 66  ITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKR 109
           IT H +KE +R  KTL        + E K  SP     P LKR
Sbjct: 86  ITLHQNKEEQRCLKTL-----NKVKGEEKEASP---PPPPLKR 120

[Close]

BLAST of PI0000718.1 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-09
Identity = 79/305 (25.90%), Postives = 112/305 (36.72%), Query Frame = 0


Query: 7   NLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRMI 66
           NLG +I  +I +WM  PKGA  FPS +E   +K +  L  +    IP  + NQ  LNR+I
Sbjct: 139 NLGAIIQGAIFAWMEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVI 198

Query: 67  TCHGHKEMERRAKTLG--DTPEGM--------------------------------AQVE 126
           T H +KE E   KTLG    PEGM                                 QV 
Sbjct: 199 TFHQNKEEEYHLKTLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQLGKKLKVDATKQVA 258

Query: 127 RKRKS---------------------------PTAASTPHLKRGRP-------------- 186
           ++  S                           P   + PHL    P              
Sbjct: 259 KENNSTHCKKVTSLPGDELLCRPYLFFPLINLPKTKTPPHLDLNEPLLVPKVVPQELIAL 318

Query: 187 ---------PTIRVSP------------PPPAVDTVQNVDDPHVKDNTPILNEVGETASS 215
                    P + +S              P   +T  NVDDP  K      N  G T+SS
Sbjct: 319 PTKGAKESIPIVVLSERDMTRNDMATVNKPQEQETQVNVDDPLSKAKHTNPNVAGMTSSS 378

[Close]

BLAST of PI0000718.1 vs. ExPASy TrEMBL
Match: A0A5D3CAP7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001850 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.4e-09
Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 2   TKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMA 61
           TKK +NLG +I ++IL+WM  P GAMPF S +E  C++ +  L   +   I G +  Q  
Sbjct: 71  TKKAINLGTIIQSAILTWMETPNGAMPFSSKVEKLCLRFIPSLTRYSQQDILGRVYTQSE 130

Query: 62  LNRMITCHGHKEMERRAKTLG--DTPEGMAQVERKRKSPTAASTPHLKRGRPPTIRVSPP 121
           LNR+I  H +K+ ER  KT+G    PEGM   + K+  P       +KR    T+     
Sbjct: 131 LNRVIILHQNKKEERNLKTVGRIRDPEGM---KEKKIHPLVP----VKRKVALTLMQPAN 190

Query: 122 PPAVDTVQN 129
            P VD +++
Sbjct: 191 KPKVDAIKD 192

[Close]

BLAST of PI0000718.1 vs. ExPASy TrEMBL
Match: A0A5D3E1R7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00150 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.4e-09
Identity = 46/103 (44.66%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 6   VNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRM 65
           VNLG +I  SILS M APK  MPFP TI+A C+K V  L   +  PI   +C+Q  LN+ 
Sbjct: 12  VNLGAIIKNSILSSMEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQT 71

Query: 66  ITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKR 109
           I  H +KE +R  KTL        + E K  SP     P LKR
Sbjct: 72  IMLHQNKEEQRCLKTL-----NKVKGEEKEASP---PPPPLKR 106

[Close]

BLAST of PI0000718.1 vs. NCBI nr
Match: KAA0031700.1 (hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK04412.1 hypothetical protein E5676_scaffold409G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 7.6e-13
Identity = 52/127 (40.94%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 3   KKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMAL 62
           K  VNLG +I  SILSWM+ P+G MPFPSTIEA C+KAV  L A +  PI G + +Q  L
Sbjct: 9   KMVVNLGAIIRNSILSWMKTPQGIMPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATL 68

Query: 63  NRMITCHGHKEMERRAKTL---------GDTPEGMAQVERKRKSPTAASTPHLKRGRPPT 121
           N+ IT H +KE ER  KTL            P   + ++RK+    A+S+   ++     
Sbjct: 69  NQTITLHQNKEEERHLKTLNKVKGEEEEASLPPPPSPLKRKKAHDNASSSKKKEKRWKQD 128

[Close]

BLAST of PI0000718.1 vs. NCBI nr
Match: KAA0050752.1 (hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-09
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 6   VNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRM 65
           VNLG +I  SILS M+APK  MPFP TI+A C+K V  L   +  PI   +C+Q+ LN+ 
Sbjct: 26  VNLGAIIKNSILSSMKAPKDIMPFPFTIKALCLKEVPELSTFSQAPIFSFVCSQVTLNQT 85

Query: 66  ITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKR 109
           IT H +KE +R  KTL        + E K  SP     P LKR
Sbjct: 86  ITLHQNKEEQRCLKTL-----NKVKGEEKEASP---PPPPLKR 120

[Close]

BLAST of PI0000718.1 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 6.7e-09
Identity = 79/305 (25.90%), Postives = 112/305 (36.72%), Query Frame = 0


Query: 7   NLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRMI 66
           NLG +I  +I +WM  PKGA  FPS +E   +K +  L  +    IP  + NQ  LNR+I
Sbjct: 139 NLGAIIQGAIFAWMEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVI 198

Query: 67  TCHGHKEMERRAKTLG--DTPEGM--------------------------------AQVE 126
           T H +KE E   KTLG    PEGM                                 QV 
Sbjct: 199 TFHQNKEEEYHLKTLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQLGKKLKVDATKQVA 258

Query: 127 RKRKS---------------------------PTAASTPHLKRGRP-------------- 186
           ++  S                           P   + PHL    P              
Sbjct: 259 KENNSTHCKKVTSLPGDELLCRPYLFFPLINLPKTKTPPHLDLNEPLLVPKVVPQELIAL 318

Query: 187 ---------PTIRVSP------------PPPAVDTVQNVDDPHVKDNTPILNEVGETASS 215
                    P + +S              P   +T  NVDDP  K      N  G T+SS
Sbjct: 319 PTKGAKESIPIVVLSERDMTRNDMATVNKPQEQETQVNVDDPLSKAKHTNPNVAGMTSSS 378

[Close]

BLAST of PI0000718.1 vs. NCBI nr
Match: KAA0047718.1 (hypothetical protein E6C27_scaffold115G002320 [Cucumis melo var. makuwa] >TYK08372.1 hypothetical protein E5676_scaffold648G001850 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-08
Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 2   TKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMA 61
           TKK +NLG +I ++IL+WM  P GAMPF S +E  C++ +  L   +   I G +  Q  
Sbjct: 71  TKKAINLGTIIQSAILTWMETPNGAMPFSSKVEKLCLRFIPSLTRYSQQDILGRVYTQSE 130

Query: 62  LNRMITCHGHKEMERRAKTLG--DTPEGMAQVERKRKSPTAASTPHLKRGRPPTIRVSPP 121
           LNR+I  H +K+ ER  KT+G    PEGM   + K+  P       +KR    T+     
Sbjct: 131 LNRVIILHQNKKEERNLKTVGRIRDPEGM---KEKKIHPLVP----VKRKVALTLMQPAN 190

Query: 122 PPAVDTVQN 129
            P VD +++
Sbjct: 191 KPKVDAIKD 192

[Close]

BLAST of PI0000718.1 vs. NCBI nr
Match: TYK30047.1 (hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-08
Identity = 46/103 (44.66%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 6   VNLGNLIATSILSWMRAPKGAMPFPSTIEAFCVKAVSFLCAINAIPIPGGLCNQMALNRM 65
           VNLG +I  SILS M APK  MPFP TI+A C+K V  L   +  PI   +C+Q  LN+ 
Sbjct: 12  VNLGAIIKNSILSSMEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQT 71

Query: 66  ITCHGHKEMERRAKTLGDTPEGMAQVERKRKSPTAASTPHLKR 109
           I  H +KE +R  KTL        + E K  SP     P LKR
Sbjct: 72  IMLHQNKEEQRCLKTL-----NKVKGEEKEASP---PPPPLKR 106

The following BLAST results are available for this feature:

BLAST of PI0000718.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000718.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLS8	3.7e-13	40.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U4J2	1.4e-09	45.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UFG4	3.2e-09	25.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CAP7	9.4e-09	36.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E1R7	9.4e-09	44.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0000718.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031700.1	7.6e-13	40.94	hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK044...	[more]
KAA0050752.1	3.0e-09	45.63	hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa]	[more]
KAA0053237.1	6.7e-09	25.90	hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]	[more]
KAA0047718.1	1.9e-08	36.43	hypothetical protein E6C27_scaffold115G002320 [Cucumis melo var. makuwa] >TYK083...	[more]
TYK30047.1	1.9e-08	44.66	hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa]	[more]

BLAST of PI0000718.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 225..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..161

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0000718	PI0000718	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0000718.1-exon	PI0000718.1-exon-chr12:18462298..18462617	exon
PI0000718.1-exon	PI0000718.1-exon-chr12:18463086..18463572	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0000718.1-cds	PI0000718.1-cds-chr12:18462298..18462617	CDS
PI0000718.1-cds	PI0000718.1-cds-chr12:18463086..18463572	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0000718.1	PI0000718.1-protein	polypeptide