Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTTGCACCACTCAAAATAGTGGAGTGTGTATTTGGTGGAGATGATAATGAGAGATCCGACTTCTACGGTATTATTAAGGAAGTGATAGAATTGAAGTACATTAAAGACAAACGAGTTCTTCTATTTAGGTGCGATTGGTATGATACAAATCCTAAGAAGAATCATGTTCGTCAAAATAATAACTTTACAAGCATAAACACGCATCACTTATGGTATAAGGATGATCCGTTTATACTTGTTTCTCAAGCACAACAAGTATTTTATGTTGATGATCTCCAATTAGATAATGGATGAAAAGTAGCTCAAAGAATTCAACACAGACATTTATGGGATGTGCCTTAAGTAGAAGAGATTGATTTAGTCGAAGCCAATATCAATCAATGTGCAGTGGATGAAGTGGATCTCGAGACACAAACATTTCATAGACCAGACATAGATCCAAGTATAGTATCTGACAATATTGGTAGAATTGAGATAGTATTAAATTTTGATGAAGTACAAGACGAAATAGAGGATGAGGACGAGGACGAGGACGAAGATGAATATGATGAAACAACATCGTCGGATGAAATGGATGATGACTCTGACATTGATGAGTAATTCAATATGGTATATTATATGTTTTGTCAGTTTATAATTTTTATTTCGGACTAATCCTAACAACTTGTGTTCTGTTTTCTTATTTTCATTATGTAGACAGAATGTCATTAGACAGCGAAGGTGAGGATACCATCGCTGGAATCACACGAGCTCGAGGGGAAACTCGTGGCGAATTCTTGTTACGAGTCGTAAATTCAGTTGGACAAATCAAGCTCGAATGGACGGAGCAACAGGGTAGACCAGTTGGACCTGGGTCAGCTTCGTTTAACAGCGAGATAGGCTATTTGGCACGCAACAATATTGATGTGAAGCGTGCAAAGAAAAAGGAGATAACGGTCCTAGAGACTAATAAAATCATTCAGATGTTACTGGTAAATATTTTTTCTTATGTTGTATTTGTTGACCGCTAATAATTGAATATGTTGTTAACTTGTTTTAATGACTACGTTTTGTAGGAGAAGTTTGTTGTCGATATATCTCAGCCATATGTGCATAGATATATTTTATACGAGATTGGAACTCGATTCAAAGATTATCGAGCGAAACTACATCGCCATTACAAAAAGTCACGTGATCCAGCACGTGCTCGCCAAAAGCCGTATAAAGACATAAAACAAGAAGACTGGAACATATTGTGTGATAGATGAGAATCTCCTGCATGGAAGGTAACTAATATATGATCTTAATTCTTTGTTATCATTTTATAAGTATCGTTTCTTAACTAAACATGTAATTTTGTAGGAAAAATCTGCCAGAAATAAGATGGCACGTAGTAAATTGAGGTTCAATCATCGAGGTGGACCAAAACCATTTCAGTGTCATCGAGAATATTTGGTATGAACCAAATAATTTATTTGAATTGTATTGCTAGTTTAGATTTTAGGTTCTTACTATTTTTACTACAACTTAACAATTTTTTTTAATAGAGAAAAGAATATGAGACATATTTAAGTCCCATTCATATATTCTTCAATATGCATTATTCGGAGGAAAAATGTTGGATTAACGAGGAAGCGAGGAATTCATATGTAAGTATTCATTTAATTTTGTCATACTTAAAGTATTGATGTAAGATATATATATCTTAAAGCTCTTAACGACACATTTATTTTTTTTAGGAAGAAATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATTATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATACGAATGGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTTTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAAAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCTAA
mRNA sequence
ATGGTGGTTGCACCACTCAAAATAGTGGAGTGTGTATTTGGTGGAGATGATAATGAGAGATCCGACTTCTACGGTATTATTAAGGAAGTGATAGAATTGAAGTACATTAAAGACAAACGAGTTCTTCTATTTAGAATGTCATTAGACAGCGAAGGTGAGGATACCATCGCTGGAATCACACGAGCTCGAGGGGAAACTCGTGGCGAATTCTTGTTACGAGTCGTAAATTCAGTTGGACAAATCAAGCTCGAATGGACGGAGCAACAGGGTAGACCAGTTGGACCTGGGTCAGCTTCGTTTAACAGCGAGATAGGCTATTTGGCACGCAACAATATTGATGTGAAGCGTGCAAAGAAAAAGGAGATAACGGTCCTAGAGACTAATAAAATCATTCAGATGTTACTGGAAAAATCTGCCAGAAATAAGATGGCACGTAGTAAATTGAGGTTCAATCATCGAGGTGGACCAAAACCATTTCAGTGTCATCGAGAATATTTGGAAGAAATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATTATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATACGAATGGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTTTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAAAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCTAA
Coding sequence (CDS)
ATGGTGGTTGCACCACTCAAAATAGTGGAGTGTGTATTTGGTGGAGATGATAATGAGAGATCCGACTTCTACGGTATTATTAAGGAAGTGATAGAATTGAAGTACATTAAAGACAAACGAGTTCTTCTATTTAGAATGTCATTAGACAGCGAAGGTGAGGATACCATCGCTGGAATCACACGAGCTCGAGGGGAAACTCGTGGCGAATTCTTGTTACGAGTCGTAAATTCAGTTGGACAAATCAAGCTCGAATGGACGGAGCAACAGGGTAGACCAGTTGGACCTGGGTCAGCTTCGTTTAACAGCGAGATAGGCTATTTGGCACGCAACAATATTGATGTGAAGCGTGCAAAGAAAAAGGAGATAACGGTCCTAGAGACTAATAAAATCATTCAGATGTTACTGGAAAAATCTGCCAGAAATAAGATGGCACGTAGTAAATTGAGGTTCAATCATCGAGGTGGACCAAAACCATTTCAGTGTCATCGAGAATATTTGGAAGAAATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATTATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATACGAATGGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTTTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAAAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCTAA
Protein sequence
MVVAPLKIVECVFGGDDNERSDFYGIIKEVIELKYIKDKRVLLFRMSLDSEGEDTIAGITRARGETRGEFLLRVVNSVGQIKLEWTEQQGRPVGPGSASFNSEIGYLARNNIDVKRAKKKEITVLETNKIIQMLLEKSARNKMARSKLRFNHRGGPKPFQCHREYLEEMITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLEARLQKHEEKLATQRKANEDQQIATQEQIQKALEAQSQEFNRKLL
Homology
BLAST of Moc11g15020 vs. NCBI nr
Match:
XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])
HSP 1 Score: 218.4 bits (555), Expect = 7.6e-53
Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = 0
Query: 136 EKSARNKMARSKLRFNHRGGPKPFQCHREYLEEMITLKAYHASQGDEKTEEEIMETVLGR 195
EKSA+NK+ARSKLRFNHRGGPKPFQCHRE EEMITLKAYHASQGDEKTEEEIMETVLG+
Sbjct: 79 EKSAKNKVARSKLRFNHRGGPKPFQCHREDSEEMITLKAYHASQGDEKTEEEIMETVLGK 138
Query: 196 RSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLEARLQKHEEKLATQRKANEDQQIATQEQ 255
RSNY+I MGYGPKPTRNKGSSSKY DEYVESLEARLQKHEE++A TQEQ
Sbjct: 139 RSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMAR----------TTQEQ 198
Query: 256 IQKALEAQSQEFNRKLL 273
IQKALEAQSQEFNRKLL
Sbjct: 199 IQKALEAQSQEFNRKLL 205
BLAST of Moc11g15020 vs. NCBI nr
Match:
XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])
HSP 1 Score: 218.4 bits (555), Expect = 7.6e-53
Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = 0
Query: 136 EKSARNKMARSKLRFNHRGGPKPFQCHREYLEEMITLKAYHASQGDEKTEEEIMETVLGR 195
EKSA+NK+ARSKLRFNHRGGPKPFQCHRE EEMITLKAYHASQGDEKTEEEIMETVLG+
Sbjct: 74 EKSAKNKVARSKLRFNHRGGPKPFQCHREDSEEMITLKAYHASQGDEKTEEEIMETVLGK 133
Query: 196 RSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLEARLQKHEEKLATQRKANEDQQIATQEQ 255
RSNY+I MGYGPKPTRNKGSSSKY DEYVESLEARLQKHEE++A TQEQ
Sbjct: 134 RSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMAR----------TTQEQ 193
Query: 256 IQKALEAQSQEFNRKLL 273
IQKALEAQSQEFNRKLL
Sbjct: 194 IQKALEAQSQEFNRKLL 200
BLAST of Moc11g15020 vs. NCBI nr
Match:
XP_022159083.1 (uncharacterized protein LOC111025525 [Momordica charantia])
HSP 1 Score: 186.0 bits (471), Expect = 4.2e-43
Identity = 109/187 (58.29%), Postives = 111/187 (59.36%), Query Frame = 0
Query: 46 MSLDSEGEDTIAGITRARGETRGEFLLRVVNSVGQIKLEWTEQQGRPVGPGSASFNSEIG 105
MS DSEGEDTIAGITRA+GETRGEFLLRVVN VG+IKLEWTEQQGRPVGPGSASFNSEIG
Sbjct: 1 MSSDSEGEDTIAGITRAQGETRGEFLLRVVNRVGKIKLEWTEQQGRPVGPGSASFNSEIG 60
Query: 106 YLARNNIDVKRAKKKEITVLETNKIIQMLL------------------------------ 163
YLARN ID KRAKKKEIT LETNKIIQMLL
Sbjct: 61 YLARNYIDAKRAKKKEITXLETNKIIQMLLEKFAVDISQPHVHRYILYEIGTRFKDYRAK 120
BLAST of Moc11g15020 vs. NCBI nr
Match:
XP_022153681.1 (uncharacterized protein LOC111021138 [Momordica charantia])
HSP 1 Score: 136.3 bits (342), Expect = 3.8e-28
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
Query: 136 EKSARNKMARSKLRFNHRGGPKPFQCHREYLEEMITLKAYHASQGDEKTEEEIMETVLGR 195
EKSA+NKMA SKLRFNHRG PKPFQCHRE EEMITLKA HASQGDEKTEEEIMETVLGR
Sbjct: 74 EKSAKNKMASSKLRFNHRGEPKPFQCHREDSEEMITLKANHASQGDEKTEEEIMETVLGR 133
Query: 196 RSNYIIRMGYGPKP 210
RSNYII MGYGPKP
Sbjct: 134 RSNYIIGMGYGPKP 147
BLAST of Moc11g15020 vs. NCBI nr
Match:
XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida])
HSP 1 Score: 84.7 bits (208), Expect = 1.3e-12
Identity = 73/261 (27.97%), Postives = 101/261 (38.70%), Query Frame = 0
Query: 61 RARGETRGEFLLRVVNSVGQIKLEWTEQQGRPVGPGSASFNSEIGYLARNNIDVKRAKKK 120
R RG +RG L + ++G+IK+ WT QG+P+G ++ FN EIG L R I +K K+K
Sbjct: 136 RVRGASRGVRLNKTTATMGRIKVTWTPTQGKPIGDMASLFNGEIGVLVRKFIPLKYEKQK 195
Query: 121 EITVLETNKIIQMLL--------------------------------------------- 180
+I + + + LL
Sbjct: 196 DIPNELYDILTEQLLNQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEAR 255
Query: 181 -------------------------EKSARNKMARSKLRFNHRGGPKPF----------- 218
EKSARNK++RSK+RFNH GG K F
Sbjct: 256 RNPYKYTTTDDWNILCDRWESSSWKEKSARNKVSRSKIRFNHCGGSKSFLSRRVDKGKED 315
BLAST of Moc11g15020 vs. ExPASy TrEMBL
Match:
A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 3.7e-53
Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = 0
Query: 136 EKSARNKMARSKLRFNHRGGPKPFQCHREYLEEMITLKAYHASQGDEKTEEEIMETVLGR 195
EKSA+NK+ARSKLRFNHRGGPKPFQCHRE EEMITLKAYHASQGDEKTEEEIMETVLG+
Sbjct: 74 EKSAKNKVARSKLRFNHRGGPKPFQCHREDSEEMITLKAYHASQGDEKTEEEIMETVLGK 133
Query: 196 RSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLEARLQKHEEKLATQRKANEDQQIATQEQ 255
RSNY+I MGYGPKPTRNKGSSSKY DEYVESLEARLQKHEE++A TQEQ
Sbjct: 134 RSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMAR----------TTQEQ 193
Query: 256 IQKALEAQSQEFNRKLL 273
IQKALEAQSQEFNRKLL
Sbjct: 194 IQKALEAQSQEFNRKLL 200
BLAST of Moc11g15020 vs. ExPASy TrEMBL
Match:
A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 3.7e-53
Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = 0
Query: 136 EKSARNKMARSKLRFNHRGGPKPFQCHREYLEEMITLKAYHASQGDEKTEEEIMETVLGR 195
EKSA+NK+ARSKLRFNHRGGPKPFQCHRE EEMITLKAYHASQGDEKTEEEIMETVLG+
Sbjct: 79 EKSAKNKVARSKLRFNHRGGPKPFQCHREDSEEMITLKAYHASQGDEKTEEEIMETVLGK 138
Query: 196 RSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLEARLQKHEEKLATQRKANEDQQIATQEQ 255
RSNY+I MGYGPKPTRNKGSSSKY DEYVESLEARLQKHEE++A TQEQ
Sbjct: 139 RSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMAR----------TTQEQ 198
Query: 256 IQKALEAQSQEFNRKLL 273
IQKALEAQSQEFNRKLL
Sbjct: 199 IQKALEAQSQEFNRKLL 205
BLAST of Moc11g15020 vs. ExPASy TrEMBL
Match:
A0A6J1DXU5 (uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025525 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 109/187 (58.29%), Postives = 111/187 (59.36%), Query Frame = 0
Query: 46 MSLDSEGEDTIAGITRARGETRGEFLLRVVNSVGQIKLEWTEQQGRPVGPGSASFNSEIG 105
MS DSEGEDTIAGITRA+GETRGEFLLRVVN VG+IKLEWTEQQGRPVGPGSASFNSEIG
Sbjct: 1 MSSDSEGEDTIAGITRAQGETRGEFLLRVVNRVGKIKLEWTEQQGRPVGPGSASFNSEIG 60
Query: 106 YLARNNIDVKRAKKKEITVLETNKIIQMLL------------------------------ 163
YLARN ID KRAKKKEIT LETNKIIQMLL
Sbjct: 61 YLARNYIDAKRAKKKEITXLETNKIIQMLLEKFAVDISQPHVHRYILYEIGTRFKDYRAK 120
BLAST of Moc11g15020 vs. ExPASy TrEMBL
Match:
A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 1.8e-28
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
Query: 136 EKSARNKMARSKLRFNHRGGPKPFQCHREYLEEMITLKAYHASQGDEKTEEEIMETVLGR 195
EKSA+NKMA SKLRFNHRG PKPFQCHRE EEMITLKA HASQGDEKTEEEIMETVLGR
Sbjct: 74 EKSAKNKMASSKLRFNHRGEPKPFQCHREDSEEMITLKANHASQGDEKTEEEIMETVLGR 133
Query: 196 RSNYIIRMGYGPKP 210
RSNYII MGYGPKP
Sbjct: 134 RSNYIIGMGYGPKP 147
BLAST of Moc11g15020 vs. ExPASy TrEMBL
Match:
A0A6J1D6Q8 (uncharacterized protein LOC111017452 OS=Momordica charantia OX=3673 GN=LOC111017452 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 3.0e-10
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0
Query: 11 CVFGGDDNERSDFYGIIKEVIELKYIKDKRVLLFR 46
CVFGGDDNERSDFYGIIKEVIELKYIKDKRVLLFR
Sbjct: 86 CVFGGDDNERSDFYGIIKEVIELKYIKDKRVLLFR 120
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022148911.1 | 7.6e-53 | 83.94 | uncharacterized protein LOC111017461 [Momordica charantia] | [more] |
| XP_022143616.1 | 7.6e-53 | 83.94 | uncharacterized protein LOC111013476 [Momordica charantia] | [more] |
| XP_022159083.1 | 4.2e-43 | 58.29 | uncharacterized protein LOC111025525 [Momordica charantia] | [more] |
| XP_022153681.1 | 3.8e-28 | 90.54 | uncharacterized protein LOC111021138 [Momordica charantia] | [more] |
| XP_038895319.1 | 1.3e-12 | 27.97 | uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CQT5 | 3.7e-53 | 83.94 | uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
| A0A6J1D6S9 | 3.7e-53 | 83.94 | uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
| A0A6J1DXU5 | 2.0e-43 | 58.29 | uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
| A0A6J1DLF1 | 1.8e-28 | 90.54 | uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
| A0A6J1D6Q8 | 3.0e-10 | 100.00 | uncharacterized protein LOC111017452 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
