Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTAGCAGAGAAGTCAGGTTTTGAAGGAATCATGAAGTTCGATGGGGCCAATTTCGAATATTGGAAGATGCAGATTAAGGATTACTTGACCTGCAAGAAGTTGAATAAAGCTTTAAAGGAACGACCAGTAGGGATGAAAGATGAAGATTGGTAGAGACGAATTAACAGCCAGTTGCCTTTATCAGATTGTGTTTATCGATGAATGTGGCAAGTCACGTAGCAAACGAAACGACAGCAGTAGATCTTATGAAAGCAAGAATAGGTACGAGAAACCCTCAGCTAATAATAAGGTATATCTCTTAAGAGTGTTCTTTTAACATTCAAATGGAAGAAAATACTATTGTCAATTCTCAGATAAATGAGGTCACAAAATTAATCAATCAATTGACATCAGTTAAGATTACTTTTAGTGACGAAGTGAATGTTATTCAGTTGCTAACATCTTTACCTGAAAGTTGGGAAACGATGAAGACAGCAGTGTCCGATTCATTAGGAGACATATCTTCGAAATTTTTGGAAAGAATCTACTTTCGAACAAGACTGAGTATTGACTGTCGAAAAAGGTAAAGAGAAGGTTGTGTCTGATGACAGGCAGCAGAAGCATAGTAGGAGGGATTGGAAGAGAGATGCTGAATGTTTTCATTGCCACAAAAAATGCCACATCAAGAAAGACTGTAGAATATTGAAAGAGGATCTGAAAAGGTATATGGCAGAGTCAAATGCAGTTGTAGACGATGCCCTCGTCTCTGTTGAAAGCAACACAGAAACAGAAAACCAGTCATCAGAGCGAGTAATAGACAGCGCAGTTCCAGTACACATATCTCTAAATAGAAGATTATTCACATCTTTCAGAAGAGGCAATCACGGCCACGTGAAGATGGGGAATGGAAGACTTTTCAAGACTAAAGGGATTTGAAATATATGATTGAAGACCGATAGTGGGACTGAGTTATTACTGCAAGATGTCAGGTATGTACCCAGTATCATAATGAACCTTATCTCTACAGGTAAGTTGGACGATGATGGTTATTAGAGTGAGTTTGGTGGGAACCAGTGGAAGCTCACCAAAGGATCCAAGTTGGTGGCAATTGACCATAGAAGATCTACAGTTTACACGTTGCAATTGAGTGTTGCCAGAGGATCATTGAAACAGTGGATGCAAGTTACAGATGGTGTCCAAAGAGGTAGGACTGAGCCAACAACAAAGACAACTAGAACAGATCATGAGGATCTGCCATCAATTCAGGAACAATGTCAATTGGTAAGTCAAAGAATGAGAACATGTTCTTTAGGTTGTCTGGGATTATCTCCAGTTATCAGACGAATGGGTGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAGATGAACTCAGTAGTTGTTGAGGTAAAGACTAGAGCTTCAATTCTGGCAGCAGGCTTGAATACAGTTGTCAAGTCATCAGTGAGAAGTTCTTTCTTCAAGAATCAGTGTTTGAGAACAAAGAAGGAAGCTTCAGATATCGCCACTTAG
mRNA sequence
ATGAGATTAGCAGAGAAGTCAGGTTTTGAAGGAATCATGAAGTTCGATGGGGCCAATTTCGAATATTGGAAGATGCAGATTAAGGATTACTTGACCTGCAAGAAGTTGAATAAAGCTTTAAAGGAACGACCAGTAGGGATGAAAGATGAAGATTGGCAGCAGAAGCATAGTAGGAGGGATTGGAAGAGAGATGCTGAATGTTTTCATTGCCACAAAAAATGCCACATCAAGAAAGACTGTAGAATATTGAAAGAGGATCTGAAAAGGTATATGGCAGAGTCAAATGCAGTTGTAGACGATGCCCTCGTCTCTGTTGAAAGCAACACAGAAACAGAAAACCAGTCATCAGAGCGATGGATGCAAGTTACAGATGGTGTCCAAAGAGGTAGGACTGAGCCAACAACAAAGACAACTAGAACAGATCATGAGGATCTGCCATCAATTCAGGAACAATGTCAATTGGTAAGTCAAAGAATGAGAACATGTTCTTTAGGTTGTCTGGGATTATCTCCAGTTATCAGACGAATGGGTGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAGATGAACTCAGTAGTTGTTGAGGTAAAGACTAGAGCTTCAATTCTGGCAGCAGGCTTGAATACAGTTGTCAAGTCATCAGTGAGAAGTTCTTTCTTCAAGAATCAGTGTTTGAGAACAAAGAAGGAAGCTTCAGATATCGCCACTTAG
Coding sequence (CDS)
ATGAGATTAGCAGAGAAGTCAGGTTTTGAAGGAATCATGAAGTTCGATGGGGCCAATTTCGAATATTGGAAGATGCAGATTAAGGATTACTTGACCTGCAAGAAGTTGAATAAAGCTTTAAAGGAACGACCAGTAGGGATGAAAGATGAAGATTGGCAGCAGAAGCATAGTAGGAGGGATTGGAAGAGAGATGCTGAATGTTTTCATTGCCACAAAAAATGCCACATCAAGAAAGACTGTAGAATATTGAAAGAGGATCTGAAAAGGTATATGGCAGAGTCAAATGCAGTTGTAGACGATGCCCTCGTCTCTGTTGAAAGCAACACAGAAACAGAAAACCAGTCATCAGAGCGATGGATGCAAGTTACAGATGGTGTCCAAAGAGGTAGGACTGAGCCAACAACAAAGACAACTAGAACAGATCATGAGGATCTGCCATCAATTCAGGAACAATGTCAATTGGTAAGTCAAAGAATGAGAACATGTTCTTTAGGTTGTCTGGGATTATCTCCAGTTATCAGACGAATGGGTGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAGATGAACTCAGTAGTTGTTGAGGTAAAGACTAGAGCTTCAATTCTGGCAGCAGGCTTGAATACAGTTGTCAAGTCATCAGTGAGAAGTTCTTTCTTCAAGAATCAGTGTTTGAGAACAAAGAAGGAAGCTTCAGATATCGCCACTTAG
Protein sequence
MRLAEKSGFEGIMKFDGANFEYWKMQIKDYLTCKKLNKALKERPVGMKDEDWQQKHSRRDWKRDAECFHCHKKCHIKKDCRILKEDLKRYMAESNAVVDDALVSVESNTETENQSSERWMQVTDGVQRGRTEPTTKTTRTDHEDLPSIQEQCQLVSQRMRTCSLGCLGLSPVIRRMGELMKSRQRTVASEKMNSVVVEVKTRASILAAGLNTVVKSSVRSSFFKNQCLRTKKEASDIAT
Homology
BLAST of Moc11g13220 vs. NCBI nr
Match:
XP_024021224.1 (uncharacterized protein LOC112091537 [Morus notabilis])
HSP 1 Score: 65.1 bits (157), Expect = 9.5e-07
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query: 11 GIMKFDGANFEYWKMQIKDYLTCKKLNKALKERPVGMKDEDWQ 54
GI KFDG +F YWKMQ++DYL KKL+ L E+P GMKDE+WQ
Sbjct: 10 GITKFDGLDFAYWKMQMEDYLYSKKLHLPLGEKPEGMKDEEWQ 52
BLAST of Moc11g13220 vs. NCBI nr
Match:
XP_022138046.1 (kirola-like [Momordica charantia])
HSP 1 Score: 59.7 bits (143), Expect = 4.0e-05
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0
Query: 174 RRMGELMKSRQRTVASEKMNSVVVEVKTRASILAAGLNTVVKSSVRS 221
RRMGELMKSRQ+TVASEKMN V EV SILA LNTVVKS+V S
Sbjct: 59 RRMGELMKSRQQTVASEKMNPVGTEVNNGVSILAVDLNTVVKSTVGS 105
BLAST of Moc11g13220 vs. NCBI nr
Match:
XP_021769901.1 (probable L-type lectin-domain containing receptor kinase S.5 [Chenopodium quinoa])
HSP 1 Score: 58.5 bits (140), Expect = 8.9e-05
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query: 14 KFDGANFEYWKMQIKDYLTCKKLNKALKE-RPVGMKDEDW 53
KFDGA+F +WKMQIKDYL KKL + L E +P GMKDEDW
Sbjct: 392 KFDGADFGFWKMQIKDYLYQKKLYEPLLEKKPEGMKDEDW 431
BLAST of Moc11g13220 vs. NCBI nr
Match:
BBH05460.1 (hypothetical protein Prudu_016848 [Prunus dulcis])
HSP 1 Score: 57.8 bits (138), Expect = 1.5e-04
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0
Query: 3 LAEKSGFEGIMKFDGANFEYWKMQIKDYLTCKKLNKALKE-RPVGMKDEDW 53
+A G I KFDGA+F +WKMQI+DYL KKL + L E +P GM DEDW
Sbjct: 1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDW 51
BLAST of Moc11g13220 vs. NCBI nr
Match:
BBG97541.1 (disease resistance family protein / LRR family protein [Prunus dulcis])
HSP 1 Score: 57.8 bits (138), Expect = 1.5e-04
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0
Query: 3 LAEKSGFEGIMKFDGANFEYWKMQIKDYLTCKKLNKALKE-RPVGMKDEDW 53
+A G I KFDGA+F +WKMQI+DYL KKL + L E +P GM DEDW
Sbjct: 546 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDW 596
BLAST of Moc11g13220 vs. ExPASy TrEMBL
Match:
A0A6J1C8L4 (kirola-like OS=Momordica charantia OX=3673 GN=LOC111009302 PE=3 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 1.9e-05
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0
Query: 174 RRMGELMKSRQRTVASEKMNSVVVEVKTRASILAAGLNTVVKSSVRS 221
RRMGELMKSRQ+TVASEKMN V EV SILA LNTVVKS+V S
Sbjct: 59 RRMGELMKSRQQTVASEKMNPVGTEVNNGVSILAVDLNTVVKSTVGS 105
BLAST of Moc11g13220 vs. ExPASy TrEMBL
Match:
A0A803LFR5 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 4.3e-05
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query: 14 KFDGANFEYWKMQIKDYLTCKKLNKALKE-RPVGMKDEDW 53
KFDGA+F +WKMQIKDYL KKL + L E +P GMKDEDW
Sbjct: 318 KFDGADFGFWKMQIKDYLYQKKLYEPLLEKKPEGMKDEDW 357
BLAST of Moc11g13220 vs. ExPASy TrEMBL
Match:
A0A4Y1RCM7 (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_012406 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 7.3e-05
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0
Query: 3 LAEKSGFEGIMKFDGANFEYWKMQIKDYLTCKKLNKALKE-RPVGMKDEDW 53
+A G I KFDGA+F +WKMQI+DYL KKL + L E +P GM DEDW
Sbjct: 1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDW 51
BLAST of Moc11g13220 vs. ExPASy TrEMBL
Match:
A0A4Y1QV92 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_004434 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 7.3e-05
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0
Query: 3 LAEKSGFEGIMKFDGANFEYWKMQIKDYLTCKKLNKALKE-RPVGMKDEDW 53
+A G I KFDGA+F +WKMQI+DYL KKL + L E +P GM DEDW
Sbjct: 1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDW 51
BLAST of Moc11g13220 vs. ExPASy TrEMBL
Match:
A0A2P5CH01 (Zinc finger, CCHC-type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153190 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 7.3e-05
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 1 MRLAEKSGFEGIMKFDGANFEYWKMQIKDYLTCKKLNKAL-KERPVGMKDEDWQ 54
M E SG GI KFDG NF YW++QI DYL KKL++ L +++P M+D+DWQ
Sbjct: 1 MARGEGSG-PGIDKFDGKNFSYWRLQINDYLHNKKLHQPLSRKKPEKMEDDDWQ 53
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_024021224.1 | 9.5e-07 | 65.12 | uncharacterized protein LOC112091537 [Morus notabilis] | [more] |
| XP_022138046.1 | 4.0e-05 | 74.47 | kirola-like [Momordica charantia] | [more] |
| XP_021769901.1 | 8.9e-05 | 70.00 | probable L-type lectin-domain containing receptor kinase S.5 [Chenopodium quinoa... | [more] |
| BBH05460.1 | 1.5e-04 | 56.86 | hypothetical protein Prudu_016848 [Prunus dulcis] | [more] |
| BBG97541.1 | 1.5e-04 | 56.86 | disease resistance family protein / LRR family protein [Prunus dulcis] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1C8L4 | 1.9e-05 | 74.47 | kirola-like OS=Momordica charantia OX=3673 GN=LOC111009302 PE=3 SV=1 | [more] |
| A0A803LFR5 | 4.3e-05 | 70.00 | Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | [more] |
| A0A4Y1RCM7 | 7.3e-05 | 56.86 | CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_012406 PE=... | [more] |
| A0A4Y1QV92 | 7.3e-05 | 56.86 | Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_004434 PE=4 SV=1 | [more] |
| A0A2P5CH01 | 7.3e-05 | 53.70 | Zinc finger, CCHC-type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153190 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
