Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTACTCGGGTGTGCACTATGGAGGAGACTTACAACAAATTAATGCGAGCCAATCGCACAGGATCCCAATCACGGATCCAAGGGGATGGGGAGGACCAGCACTACGAAGGCGAGACTAGGGATCCTTCTCTCCACCCAGAGAATGACGATCAACACCCTGTCGATAATGATGGGGCCAATTATAGTCGTCAGGAGGACGACTTAAGGAAAGTTCTCATCGATAAGAAGAAGAAGAACTCTGCCTTCTGAGGTATGGACGTCTCTCTTTCTTGTTCGTAGAAGAACTCGAACTTGAATGATGAATCTCATTACACTCCGATTGTACCTGAAGGAGTTATTACAAGGGAAGAGTTCGACCTAATGAAAAGCAAGTTTGACGCTCAGATCAAGACTTTCAAACAAAAGTACGAGAAGAAAGAAAGTGTGTTTGACGATGGCGAAATGGGCGAATTGTCGTTCACTTCGGACATCCTTGAGGCACCCATCCTTGCCAAATTCAAGACATCCGCCATGAAGCCTTACGATGAGTCAAATGACCCAAAAGATTATGTTGAGGTCTTTGAGGGCCTCATGGACTTCCAAGCGGCATCTGATGCCATCAAGTGCTGA
mRNA sequence
ATGCGTACTCGGGTGTGCACTATGGAGGAGACTTACAACAAATTAATGCGAGCCAATCGCACAGGATCCCAATCACGGATCCAAGGGGATGGGGAGGACCAGCACTACGAAGGCGAGACTAGGGATCCTTCTCTCCACCCAGAGAATGACGATCAACACCCTGTCGATAATGATGGGGCCAATTATAGTCGTCAGGAGGACGACTTAAGGAAAAAGAACTCGAACTTGAATGATGAATCTCATTACACTCCGATTGTACCTGAAGGAGTTATTACAAGGGAAGAGTTCGACCTAATGAAAAGCAAGTTTGACGCTCAGATCAAGACTTTCAAACAAAAGTACGAGAAGAAAGAAAGTGTGTTTGACGATGGCGAAATGGGCGAATTGTCGTTCACTTCGGACATCCTTGAGGCACCCATCCTTGCCAAATTCAAGACATCCGCCATGAAGCCTTACGATGAGTCAAATGACCCAAAAGATTATGTTGAGGTCTTTGAGGGCCTCATGGACTTCCAAGCGGCATCTGATGCCATCAAGTGCTGA
Coding sequence (CDS)
ATGCGTACTCGGGTGTGCACTATGGAGGAGACTTACAACAAATTAATGCGAGCCAATCGCACAGGATCCCAATCACGGATCCAAGGGGATGGGGAGGACCAGCACTACGAAGGCGAGACTAGGGATCCTTCTCTCCACCCAGAGAATGACGATCAACACCCTGTCGATAATGATGGGGCCAATTATAGTCGTCAGGAGGACGACTTAAGGAAAAAGAACTCGAACTTGAATGATGAATCTCATTACACTCCGATTGTACCTGAAGGAGTTATTACAAGGGAAGAGTTCGACCTAATGAAAAGCAAGTTTGACGCTCAGATCAAGACTTTCAAACAAAAGTACGAGAAGAAAGAAAGTGTGTTTGACGATGGCGAAATGGGCGAATTGTCGTTCACTTCGGACATCCTTGAGGCACCCATCCTTGCCAAATTCAAGACATCCGCCATGAAGCCTTACGATGAGTCAAATGACCCAAAAGATTATGTTGAGGTCTTTGAGGGCCTCATGGACTTCCAAGCGGCATCTGATGCCATCAAGTGCTGA
Protein sequence
MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC
Homology
BLAST of Moc09g12100 vs. NCBI nr
Match:
XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])
HSP 1 Score: 174.9 bits (442), Expect = 6.4e-40
Identity = 105/200 (52.50%), Postives = 125/200 (62.50%), Query Frame = 0
Query: 1 MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGA 60
MRT++CTME+ Y+++++A S+S + D H E R L P HP +
Sbjct: 1 MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMH---EQRGHHLGPVKKG-HPEGGEDE 60
Query: 61 NYSRQEDDLRK--------------------KNSNLNDESHYTPIVPEGVITREEFDLMK 120
Y+ Q DLR+ +NSN ES Y PI PEGVITREEFD +K
Sbjct: 61 EYTHQRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPEGVITREEFDQLK 120
Query: 121 SKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKD 180
SKFDAQ++ K K EKKES FDDG++GE FTSDILEA I KFKT MKPYD S DPKD
Sbjct: 121 SKFDAQVEALKAKCEKKESSFDDGDLGESPFTSDILEALIPLKFKTPTMKPYDGSKDPKD 180
BLAST of Moc09g12100 vs. NCBI nr
Match:
XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])
HSP 1 Score: 167.5 bits (423), Expect = 1.0e-37
Identity = 101/190 (53.16%), Postives = 126/190 (66.32%), Query Frame = 0
Query: 1 MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGA 60
MRT++ TMEE YNK+++ S+S Q ED H +G+ LH + D+ + D
Sbjct: 4 MRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGD-----LHCDPVDEEHLGGDLR 63
Query: 61 NY-SRQEDDLRK---------KNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTF 120
++ +R+ + + KNSN ES Y PI PEGVITREEF+ +KSKFDAQ++
Sbjct: 64 DHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPEGVITREEFNQLKSKFDAQVEAL 123
Query: 121 KQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMD 180
K + EKKES FDDG++GE FTSDILEA I KFKT MK YD S DPKDYVEVFEGLMD
Sbjct: 124 KVRCEKKESAFDDGDLGESPFTSDILEASIPPKFKTPTMKSYDGSKDPKDYVEVFEGLMD 183
BLAST of Moc09g12100 vs. NCBI nr
Match:
XP_022155139.1 (uncharacterized protein LOC111022280 [Momordica charantia])
HSP 1 Score: 163.3 bits (412), Expect = 1.9e-36
Identity = 91/167 (54.49%), Postives = 109/167 (65.27%), Query Frame = 0
Query: 38 GETRDPSLHPENDDQHPVDND-GANYSRQEDDLRK-----------------------KN 97
GE PS+ P N + P+ ND G +YS +++DLRK N
Sbjct: 9 GEKGAPSIQPGN--REPIPNDEGVDYSLRDNDLRKHLTDKKKKASWEPEDSLSYSREFSN 68
Query: 98 SNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTS 157
SNL +S Y P++PE VI REEFDLMK +FD Q++ K + EKKES FDD ++GE FTS
Sbjct: 69 SNLKAQSKYKPLIPEAVINREEFDLMKHRFDEQVEALKARCEKKESPFDDDDLGESPFTS 128
Query: 158 DILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC 181
DI+EAPI KFKT MKPYD S DPKDYVEVFEGLMDFQAA+DAIKC
Sbjct: 129 DIMEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKC 173
BLAST of Moc09g12100 vs. NCBI nr
Match:
XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])
HSP 1 Score: 161.0 bits (406), Expect = 9.6e-36
Identity = 95/179 (53.07%), Postives = 117/179 (65.36%), Query Frame = 0
Query: 1 MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGA 60
MRT++ TMEE YN++++A GS+S D + G+ RD + +
Sbjct: 99 MRTQMLTMEEMYNEMVQAVGAGSRSE---DRAARDERGDLRDHLSRKRSSSLRKGRSPSC 158
Query: 61 NYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESV 120
++ KNSN ES Y P+VPEGVITREEFD +KSKFDAQ++T K + E K S
Sbjct: 159 SH---------KNSNQQAESSYNPVVPEGVITREEFDQLKSKFDAQVETLKARCEVKGST 218
Query: 121 FDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIK 180
FDDG++GE FTSDILEA I +KFKT MKPYD S DPKDYVEVFEGLM FQAA+DAIK
Sbjct: 219 FDDGDLGESPFTSDILEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMGFQAATDAIK 265
BLAST of Moc09g12100 vs. NCBI nr
Match:
XP_022157897.1 (uncharacterized protein LOC111024503 [Momordica charantia])
HSP 1 Score: 151.8 bits (382), Expect = 5.8e-33
Identity = 78/123 (63.41%), Postives = 89/123 (72.36%), Query Frame = 0
Query: 58 DGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKK 117
D +YSR+ NS+ +S Y P+ PE VITREEFDLMK +FD Q++ K K EKK
Sbjct: 475 DSPSYSRE-----FSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKK 534
Query: 118 ESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDA 177
E FDDG++GE FTSDILE PI KFKT MK YD S DPKDYVEVFEGLMDFQAA+DA
Sbjct: 535 ECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDA 592
Query: 178 IKC 181
IKC
Sbjct: 595 IKC 592
BLAST of Moc09g12100 vs. ExPASy TrEMBL
Match:
A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 3.1e-40
Identity = 105/200 (52.50%), Postives = 125/200 (62.50%), Query Frame = 0
Query: 1 MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGA 60
MRT++CTME+ Y+++++A S+S + D H E R L P HP +
Sbjct: 1 MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMH---EQRGHHLGPVKKG-HPEGGEDE 60
Query: 61 NYSRQEDDLRK--------------------KNSNLNDESHYTPIVPEGVITREEFDLMK 120
Y+ Q DLR+ +NSN ES Y PI PEGVITREEFD +K
Sbjct: 61 EYTHQRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPEGVITREEFDQLK 120
Query: 121 SKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKD 180
SKFDAQ++ K K EKKES FDDG++GE FTSDILEA I KFKT MKPYD S DPKD
Sbjct: 121 SKFDAQVEALKAKCEKKESSFDDGDLGESPFTSDILEALIPLKFKTPTMKPYDGSKDPKD 180
BLAST of Moc09g12100 vs. ExPASy TrEMBL
Match:
A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 5.0e-38
Identity = 101/190 (53.16%), Postives = 126/190 (66.32%), Query Frame = 0
Query: 1 MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGA 60
MRT++ TMEE YNK+++ S+S Q ED H +G+ LH + D+ + D
Sbjct: 4 MRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGD-----LHCDPVDEEHLGGDLR 63
Query: 61 NY-SRQEDDLRK---------KNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTF 120
++ +R+ + + KNSN ES Y PI PEGVITREEF+ +KSKFDAQ++
Sbjct: 64 DHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPEGVITREEFNQLKSKFDAQVEAL 123
Query: 121 KQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMD 180
K + EKKES FDDG++GE FTSDILEA I KFKT MK YD S DPKDYVEVFEGLMD
Sbjct: 124 KVRCEKKESAFDDGDLGESPFTSDILEASIPPKFKTPTMKSYDGSKDPKDYVEVFEGLMD 183
BLAST of Moc09g12100 vs. ExPASy TrEMBL
Match:
A0A6J1DPC9 (uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022280 PE=4 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 9.3e-37
Identity = 91/167 (54.49%), Postives = 109/167 (65.27%), Query Frame = 0
Query: 38 GETRDPSLHPENDDQHPVDND-GANYSRQEDDLRK-----------------------KN 97
GE PS+ P N + P+ ND G +YS +++DLRK N
Sbjct: 9 GEKGAPSIQPGN--REPIPNDEGVDYSLRDNDLRKHLTDKKKKASWEPEDSLSYSREFSN 68
Query: 98 SNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTS 157
SNL +S Y P++PE VI REEFDLMK +FD Q++ K + EKKES FDD ++GE FTS
Sbjct: 69 SNLKAQSKYKPLIPEAVINREEFDLMKHRFDEQVEALKARCEKKESPFDDDDLGESPFTS 128
Query: 158 DILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC 181
DI+EAPI KFKT MKPYD S DPKDYVEVFEGLMDFQAA+DAIKC
Sbjct: 129 DIMEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKC 173
BLAST of Moc09g12100 vs. ExPASy TrEMBL
Match:
A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)
HSP 1 Score: 161.0 bits (406), Expect = 4.6e-36
Identity = 95/179 (53.07%), Postives = 117/179 (65.36%), Query Frame = 0
Query: 1 MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGA 60
MRT++ TMEE YN++++A GS+S D + G+ RD + +
Sbjct: 99 MRTQMLTMEEMYNEMVQAVGAGSRSE---DRAARDERGDLRDHLSRKRSSSLRKGRSPSC 158
Query: 61 NYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESV 120
++ KNSN ES Y P+VPEGVITREEFD +KSKFDAQ++T K + E K S
Sbjct: 159 SH---------KNSNQQAESSYNPVVPEGVITREEFDQLKSKFDAQVETLKARCEVKGST 218
Query: 121 FDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIK 180
FDDG++GE FTSDILEA I +KFKT MKPYD S DPKDYVEVFEGLM FQAA+DAIK
Sbjct: 219 FDDGDLGESPFTSDILEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMGFQAATDAIK 265
BLAST of Moc09g12100 vs. ExPASy TrEMBL
Match:
A0A6J1DVR0 (uncharacterized protein LOC111024503 OS=Momordica charantia OX=3673 GN=LOC111024503 PE=4 SV=1)
HSP 1 Score: 151.8 bits (382), Expect = 2.8e-33
Identity = 78/123 (63.41%), Postives = 89/123 (72.36%), Query Frame = 0
Query: 58 DGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKK 117
D +YSR+ NS+ +S Y P+ PE VITREEFDLMK +FD Q++ K K EKK
Sbjct: 475 DSPSYSRE-----FSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKK 534
Query: 118 ESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDA 177
E FDDG++GE FTSDILE PI KFKT MK YD S DPKDYVEVFEGLMDFQAA+DA
Sbjct: 535 ECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDA 592
Query: 178 IKC 181
IKC
Sbjct: 595 IKC 592
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DDW5 | 3.1e-40 | 52.50 | uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A6J1DPN4 | 5.0e-38 | 53.16 | uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DPC9 | 9.3e-37 | 54.49 | uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DZJ1 | 4.6e-36 | 53.07 | uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DVR0 | 2.8e-33 | 63.41 | uncharacterized protein LOC111024503 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
Match Name | E-value | Identity | Description | |