Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAGGCCAATAGCCTCTTGGAGAACGCTCGACGTGAGTTGGAAACTGAGAAGAGAAAATCCCGAGATGAGCTTGCCAACCTGCAGAGGAGGCTTGATGAGGCCAACGCTCGACTCTCCAACTCTGAATTCTTGGCCGGAGAATTCAGGAAGACACAGGAGTATGTTTATTTACAGAATGCTGCCATGGAGTGTGGCGTCTCTTGATCTCTTCGCCAAGTTTCTACTGAGCATCCCAACATTGACTACTCCTTTCTCCAGGAGTGCTTTAAGGTCGAGTGTGATGCCCCCGACGACATGGATGATGATGATGATGAGTAGGAGGGTAGCGAGCCACTTTGTCTGTGTTGATCGCTTTTATGAACTAGTTGTTGTTATGTTGTTTTGTTTTCATTTATAGCTACCATTAGAATTATCAATCAATTCTCTAATACAAAAAATTATTGGCTTACGACTCTAACTCTGATGGAGCTGATTTTCGTTACCTTTACTTCTCATAGGCTTCTAACCCTTTGGCTATGGCCAATGGTTTTGTACCTTTAGTTGCTGTCGTTTGGCTTTTGATTTTGCTCCATCTTATGTTTTAA
mRNA sequence
ATGGACCAGGCCAATAGCCTCTTGGAGAACGCTCGACGTGAGTTGGAAACTGAGAAGAGAAAATCCCGAGATGAGCTTGCCAACCTGCAGAGGAGGCTTGATGAGGCCAACGCTCGACTCTCCAACTCTGAATTCTTGGCCGGAGAATTCAGGAAGACACAGGAGTATGTTTATTTACAGAATGCTGCCATGGAGTGTGGCGCTTCTAACCCTTTGGCTATGGCCAATGGTTTTGTACCTTTAGTTGCTGTCGTTTGGCTTTTGATTTTGCTCCATCTTATGTTTTAA
Coding sequence (CDS)
ATGGACCAGGCCAATAGCCTCTTGGAGAACGCTCGACGTGAGTTGGAAACTGAGAAGAGAAAATCCCGAGATGAGCTTGCCAACCTGCAGAGGAGGCTTGATGAGGCCAACGCTCGACTCTCCAACTCTGAATTCTTGGCCGGAGAATTCAGGAAGACACAGGAGTATGTTTATTTACAGAATGCTGCCATGGAGTGTGGCGCTTCTAACCCTTTGGCTATGGCCAATGGTTTTGTACCTTTAGTTGCTGTCGTTTGGCTTTTGATTTTGCTCCATCTTATGTTTTAA
Protein sequence
MDQANSLLENARRELETEKRKSRDELANLQRRLDEANARLSNSEFLAGEFRKTQEYVYLQNAAMECGASNPLAMANGFVPLVAVVWLLILLHLMF
Homology
BLAST of Moc06g19660 vs. NCBI nr
Match:
XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia])
HSP 1 Score: 101.3 bits (251), Expect = 4.8e-18
Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
Query: 1 MDQANSLLENARRELETEKRKSRDELANLQRRLDEANARLSNSEFLAGEFRKTQEYVYLQ 60
++QANSLLE +R+LE EKRKSRDELANLQRRLDE NARL NSEFLA EF+KTQEYV LQ
Sbjct: 1150 LNQANSLLEGTQRKLEMEKRKSRDELANLQRRLDEVNARLFNSEFLAREFKKTQEYVDLQ 1209
Query: 61 NAAMECG 68
N+AMECG
Sbjct: 1210 NSAMECG 1216
BLAST of Moc06g19660 vs. NCBI nr
Match:
XP_022147193.1 (uncharacterized protein LOC111016203 [Momordica charantia])
HSP 1 Score: 89.0 bits (219), Expect = 2.4e-14
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0
Query: 1 MDQANSLLENARRELETEKRKSRDELANLQRRLDEANARLSNSEFLAGEFRKTQEYVYLQ 60
+DQAN LL N R +LE K KS D+LA LQR+L+EAN RLSNS+FLA EF+KTQ+YV LQ
Sbjct: 136 LDQANMLLANVRHDLEVGKGKSGDDLAALQRKLNEANDRLSNSKFLAAEFKKTQDYVDLQ 195
Query: 61 NAAMECGAS 70
NAAMECG S
Sbjct: 196 NAAMECGVS 204
BLAST of Moc06g19660 vs. NCBI nr
Match:
XP_022150031.1 (uncharacterized protein LOC111018304 [Momordica charantia])
HSP 1 Score: 67.0 bits (162), Expect = 9.9e-08
Identity = 34/54 (62.96%), Postives = 47/54 (87.04%), Query Frame = 0
Query: 1 MDQANSLLENARRELETEKRKSRDELANLQRRLDEANARLSNSEFLAGEFRKTQ 55
++QANS+L N + +LE E+R+SRD+L LQ++LDEANA+LSNSEFLA +F+KTQ
Sbjct: 124 LNQANSMLANTQHDLEVERRRSRDDLVVLQKKLDEANAQLSNSEFLAEKFKKTQ 177
BLAST of Moc06g19660 vs. ExPASy TrEMBL
Match:
A0A6J1DSS1 (uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023586 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 2.3e-18
Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
Query: 1 MDQANSLLENARRELETEKRKSRDELANLQRRLDEANARLSNSEFLAGEFRKTQEYVYLQ 60
++QANSLLE +R+LE EKRKSRDELANLQRRLDE NARL NSEFLA EF+KTQEYV LQ
Sbjct: 1150 LNQANSLLEGTQRKLEMEKRKSRDELANLQRRLDEVNARLFNSEFLAREFKKTQEYVDLQ 1209
Query: 61 NAAMECG 68
N+AMECG
Sbjct: 1210 NSAMECG 1216
BLAST of Moc06g19660 vs. ExPASy TrEMBL
Match:
A0A6J1D0L6 (uncharacterized protein LOC111016203 OS=Momordica charantia OX=3673 GN=LOC111016203 PE=4 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0
Query: 1 MDQANSLLENARRELETEKRKSRDELANLQRRLDEANARLSNSEFLAGEFRKTQEYVYLQ 60
+DQAN LL N R +LE K KS D+LA LQR+L+EAN RLSNS+FLA EF+KTQ+YV LQ
Sbjct: 136 LDQANMLLANVRHDLEVGKGKSGDDLAALQRKLNEANDRLSNSKFLAAEFKKTQDYVDLQ 195
Query: 61 NAAMECGAS 70
NAAMECG S
Sbjct: 196 NAAMECGVS 204
BLAST of Moc06g19660 vs. ExPASy TrEMBL
Match:
A0A6J1DA80 (uncharacterized protein LOC111018304 OS=Momordica charantia OX=3673 GN=LOC111018304 PE=4 SV=1)
HSP 1 Score: 67.0 bits (162), Expect = 4.8e-08
Identity = 34/54 (62.96%), Postives = 47/54 (87.04%), Query Frame = 0
Query: 1 MDQANSLLENARRELETEKRKSRDELANLQRRLDEANARLSNSEFLAGEFRKTQ 55
++QANS+L N + +LE E+R+SRD+L LQ++LDEANA+LSNSEFLA +F+KTQ
Sbjct: 124 LNQANSMLANTQHDLEVERRRSRDDLVVLQKKLDEANAQLSNSEFLAEKFKKTQ 177
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022156747.1 | 4.8e-18 | 80.60 | uncharacterized protein LOC111023586 [Momordica charantia] | [more] |
| XP_022147193.1 | 2.4e-14 | 69.57 | uncharacterized protein LOC111016203 [Momordica charantia] | [more] |
| XP_022150031.1 | 9.9e-08 | 62.96 | uncharacterized protein LOC111018304 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DSS1 | 2.3e-18 | 80.60 | uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
| A0A6J1D0L6 | 1.2e-14 | 69.57 | uncharacterized protein LOC111016203 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
| A0A6J1DA80 | 4.8e-08 | 62.96 | uncharacterized protein LOC111018304 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
