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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAGAATTGAATACTAGACTAAAGAAAATAAGAGACGAGATTAAAGAACAGATCATGGAAGTGCAGAATGTAGAGCTAAAGAAGATGAGACAAGACATCGATAATATTCAAGAACAAGTCACGGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGTGGACATTTCTCAACCTAAAAATTTAGTCAAGCCTCATGATAATTCATCACTTAGAGTGGACCCACCTCTTTGTCAATCAACAGAGGGCTTCCCCCAGCACAGTTCGTCACGTGAAGCTGAGTTGTCCAAGAAAGGCCAACAAGCTCCTACAAAATATCAGGTTGAATTCACATTCCAAGATGGACAAACATCAAAGGCCAATTATTCAGATAATTCAAAAGGTAAAGAAAAAGAAAATGTTACCAATAGAAATGCTGAAGAAACTACAGGGAAAGAATATGCTCAAAGATGGGGAGAAGCAACGGAACAACTGTCAATGCCTTTAATTAATAAAGAGCCATATCTTGAAGTGAATAGAAGCTATTTTAAAAGGAAAAATAAAGTCCAAGCAGTAATCTCGAAGTGCAAGTGGATGCACCAACAAGGATCTACGGTATACAATATTTCGTCTACAGTAACCATAAACTTATTGGCTTTGCAGTATGACCACAACTAA mRNA sequence ATGGAAGAATTGAATACTAGACTAAAGAAAATAAGAGACGAGATTAAAGAACAGATCATGGAAGTGCAGAATGTAGAGCTAAAGAAGATGAGACAAGACATCGATAATATTCAAGAACAAGTCACGGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGTGGACATTTCTCAACCTAAAAATTTAGTCAAGCCTCATGATAATTCATCACTTAGAGTGGACCCACCTCTTTGTCAATCAACAGAGGGCTTCCCCCAGCACAGTTCGTCACGTGAAGCTGAGTTGTCCAAGAAAGGCCAACAAGCTCCTACAAAATATCAGGTTGAATTCACATTCCAAGATGGACAAACATCAAAGGCCAATTATTCAGATAATTCAAAAGGTAAAGAAAAAGAAAATGTTACCAATAGAAATGCTGAAGAAACTACAGGGAAAGAATATGCTCAAAGATGGGGAGAAGCAACGGAACAACTGTCAATGCCTTTAATTAATAAAGAGCCATATCTTGAAGTGAATAGAAGCTATTTTAAAAGGAAAAATAAAGTCCAAGCAGTAATCTCGAAGTGCAAGTGGATGCACCAACAAGGATCTACGGTATACAATATTTCGTCTACAGTAACCATAAACTTATTGGCTTTGCAGTATGACCACAACTAA Coding sequence (CDS) ATGGAAGAATTGAATACTAGACTAAAGAAAATAAGAGACGAGATTAAAGAACAGATCATGGAAGTGCAGAATGTAGAGCTAAAGAAGATGAGACAAGACATCGATAATATTCAAGAACAAGTCACGGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGTGGACATTTCTCAACCTAAAAATTTAGTCAAGCCTCATGATAATTCATCACTTAGAGTGGACCCACCTCTTTGTCAATCAACAGAGGGCTTCCCCCAGCACAGTTCGTCACGTGAAGCTGAGTTGTCCAAGAAAGGCCAACAAGCTCCTACAAAATATCAGGTTGAATTCACATTCCAAGATGGACAAACATCAAAGGCCAATTATTCAGATAATTCAAAAGGTAAAGAAAAAGAAAATGTTACCAATAGAAATGCTGAAGAAACTACAGGGAAAGAATATGCTCAAAGATGGGGAGAAGCAACGGAACAACTGTCAATGCCTTTAATTAATAAAGAGCCATATCTTGAAGTGAATAGAAGCTATTTTAAAAGGAAAAATAAAGTCCAAGCAGTAATCTCGAAGTGCAAGTGGATGCACCAACAAGGATCTACGGTATACAATATTTCGTCTACAGTAACCATAAACTTATTGGCTTTGCAGTATGACCACAACTAA Protein sequence MEELNTRLKKIRDEIKEQIMEVQNVELKKMRQDIDNIQEQVTEIFNVLKNIVTVVDISQPKNLVKPHDNSSLRVDPPLCQSTEGFPQHSSSREAELSKKGQQAPTKYQVEFTFQDGQTSKANYSDNSKGKEKENVTNRNAEETTGKEYAQRWGEATEQLSMPLINKEPYLEVNRSYFKRKNKVQAVISKCKWMHQQGSTVYNISSTVTINLLALQYDHN
Homology
BLAST of Moc06g17970 vs. NCBI nr
Match: XP_022153553.1 (uncharacterized protein LOC111021029 [Momordica charantia]) HSP 1 Score: 258.5 bits (659), Expect = 5.4e-65 Identity = 146/217 (67.28%), Postives = 168/217 (77.42%), Query Frame = 0
Query: 1 MEELNTRLKKIRDEIKEQIMEVQNVELKKMRQDIDNIQEQVTEIFNVLKNIVTVVDISQP 60
+EELN LKKIRDEI+EQ+MEVQNVELKKMRQDIDNIQ+QV +I NVLKNIVTV SQP
Sbjct: 20 IEELNIELKKIRDEIQEQVMEVQNVELKKMRQDIDNIQKQVMKILNVLKNIVTVGGTSQP 79
Query: 61 KNLVKPHDNSSLRVDPPLCQSTEGFPQHSSSREAELSKKGQQAPTKYQVEFTFQDGQTSK 120
NLV+P++NSS RVDPPLCQS EGFPQHSSS +A+LSKKGQQ PT QVEFTF+D QT K
Sbjct: 80 NNLVEPYNNSSPRVDPPLCQSKEGFPQHSSSHDAQLSKKGQQVPTNCQVEFTFKDEQTPK 139
Query: 121 ANYSDNSKGKEKENVTNRNAEETTGKEYAQRWGEATEQLSMPLINKEPYLEVNRSYFKRK 180
NYSDN KG+EKENVT QRWG+A EQL +PLINKEP+ ++N+S KRK
Sbjct: 140 VNYSDNLKGEEKENVT-------------QRWGKAIEQLPVPLINKEPHPKMNKSSIKRK 199
Query: 181 NKVQAVISKCKWMHQQGSTVYNISSTVTINLLALQYD 218
NKV AV+SK K +QQG Y+ STV IN + LQ D
Sbjct: 200 NKVLAVVSKRKRKYQQGFVAYS-PSTVPINSMTLQDD 222
BLAST of Moc06g17970 vs. NCBI nr
Match: XP_022143515.1 (uncharacterized protein LOC111013388 [Momordica charantia]) HSP 1 Score: 104.0 bits (258), Expect = 1.7e-18 Identity = 58/78 (74.36%), Postives = 64/78 (82.05%), Query Frame = 0
Query: 1 MEELNTRLKKIRDEIKEQIMEVQNVELKKMRQDIDNIQEQVTEIFNVLKNIVTVVDISQP 60
+EELN LK+IRDEI+E + EV NVELKKMRQDID IQ QVT I NVLK IVTV DISQP
Sbjct: 65 IEELNXELKEIRDEIQEHVXEVHNVELKKMRQDIDKIQGQVTGILNVLKKIVTVGDISQP 124
Query: 61 KNLVKPHDNSSLRVDPPL 79
NLV+PH+NSSLRV P L
Sbjct: 125 NNLVEPHNNSSLRVGPSL 142
BLAST of Moc06g17970 vs. ExPASy TrEMBL
Match: A0A6J1DHS7 (uncharacterized protein LOC111021029 OS=Momordica charantia OX=3673 GN=LOC111021029 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 2.6e-65 Identity = 146/217 (67.28%), Postives = 168/217 (77.42%), Query Frame = 0
Query: 1 MEELNTRLKKIRDEIKEQIMEVQNVELKKMRQDIDNIQEQVTEIFNVLKNIVTVVDISQP 60
+EELN LKKIRDEI+EQ+MEVQNVELKKMRQDIDNIQ+QV +I NVLKNIVTV SQP
Sbjct: 20 IEELNIELKKIRDEIQEQVMEVQNVELKKMRQDIDNIQKQVMKILNVLKNIVTVGGTSQP 79
Query: 61 KNLVKPHDNSSLRVDPPLCQSTEGFPQHSSSREAELSKKGQQAPTKYQVEFTFQDGQTSK 120
NLV+P++NSS RVDPPLCQS EGFPQHSSS +A+LSKKGQQ PT QVEFTF+D QT K
Sbjct: 80 NNLVEPYNNSSPRVDPPLCQSKEGFPQHSSSHDAQLSKKGQQVPTNCQVEFTFKDEQTPK 139
Query: 121 ANYSDNSKGKEKENVTNRNAEETTGKEYAQRWGEATEQLSMPLINKEPYLEVNRSYFKRK 180
NYSDN KG+EKENVT QRWG+A EQL +PLINKEP+ ++N+S KRK
Sbjct: 140 VNYSDNLKGEEKENVT-------------QRWGKAIEQLPVPLINKEPHPKMNKSSIKRK 199
Query: 181 NKVQAVISKCKWMHQQGSTVYNISSTVTINLLALQYD 218
NKV AV+SK K +QQG Y+ STV IN + LQ D
Sbjct: 200 NKVLAVVSKRKRKYQQGFVAYS-PSTVPINSMTLQDD 222
BLAST of Moc06g17970 vs. ExPASy TrEMBL
Match: A0A6J1CP05 (uncharacterized protein LOC111013388 OS=Momordica charantia OX=3673 GN=LOC111013388 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.2e-19 Identity = 58/78 (74.36%), Postives = 64/78 (82.05%), Query Frame = 0
Query: 1 MEELNTRLKKIRDEIKEQIMEVQNVELKKMRQDIDNIQEQVTEIFNVLKNIVTVVDISQP 60
+EELN LK+IRDEI+E + EV NVELKKMRQDID IQ QVT I NVLK IVTV DISQP
Sbjct: 65 IEELNXELKEIRDEIQEHVXEVHNVELKKMRQDIDKIQGQVTGILNVLKKIVTVGDISQP 124
Query: 61 KNLVKPHDNSSLRVDPPL 79
NLV+PH+NSSLRV P L
Sbjct: 125 NNLVEPHNNSSLRVGPSL 142
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022153553.1 | 5.4e-65 | 67.28 | uncharacterized protein LOC111021029 [Momordica charantia] | [more] |
| XP_022143515.1 | 1.7e-18 | 74.36 | uncharacterized protein LOC111013388 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DHS7 | 2.6e-65 | 67.28 | uncharacterized protein LOC111021029 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
| A0A6J1CP05 | 8.2e-19 | 74.36 | uncharacterized protein LOC111013388 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1..47 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 118..145 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 74..103 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 125..145 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 62..103 |
Relationships
The following mRNA feature(s) are a part of this gene:
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