Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTGCTCATATGGTCGATATAAATCCACCACCTTACTTGGAAGATATGTATCACTATGCTATCAAAATTGAAGATCAATTGAGGAAAAAAATGAGCATTCCAAAAAGATTGAATCAGTGCAACCAAAAGGGAAGTTTGGTGTTGCCAAACGAGTGGAGCAAGAGCTGCAATACCAAAAAGAATGAAGATCCAGTGGAGGTAAGGGAGAGACTAATTCTATTAAATGTTGGTAGTACATAGGGTTTGGACACACGAGCAAACAATGTGTCAATAAAATAGTCATGGTATAAGAAATGAAAAACTTGAGTCGAATGACGTTTGTGAGAAACATGATACACAACTTGAGGAAGAATCTAGAGCACATGATGGTGAATTTATTGAAAAAAATAACAAAGATTCTGATGTTGATGAAAGTAAGTTGAAAGAAAATAGTGAAAGCGAATATTTAAGAGAAAGGAATGCAAATGATAAAGAAGAGGAAAAGAGCAAGGTCCAATCCATTTGTCCATATGGGCAAAAATTAATGAATGTATTGAAGAAGGACCCTTACTATCAAGCTCACATATTTGATCTTAGTGTTTCTACTTTTCAAAGTTTTTTGCAAGAAATTTCAGCCCTTCAAATCAAGCATGGTTAAATACAAGTAACAAAGGAAGCTATGATGGAGCCAACAAGAGTTATCCTATCATCTTCTCGTGATCTTAAGATTGTCTTACAAGAAACATATAAAATAGATCTTGATTTTTAAGATACTAACTTGCTTCCTTATTGTGTAGGTAACCATGTACAAGTGAAGCCTAAGACGAAGGGAATTGTAGAAAACTACTTGTACAAGAAGTCTTCTAACAATGTCATCGTCGAAAACACACAATGTTGTGTTGCATAA
mRNA sequence
ATGGAAATTGCTCATATGGTCGATATAAATCCACCACCTTACTTGGAAGATATGTATCACTATGCTATCAAAATTGAAGATCAATTGAGGAAAAAAATGAGCATTCCAAAAAGATTGAATCAGTGCAACCAAAAGGGAAGTTTGGTGTTGCCAAACGAGTGGAGCAAGAGCTGCAATACCAAAAAGAATGAAGATCCAGTGGAGTCGAATGACGTTTGTGAGAAACATGATACACAACTTGAGGAAGAATCTAGAGCACATGATGGTGAATTTATTGAAAAAAATAACAAAGATTCTGATGTTGATGAAAGTAACCATGTACAAGTGAAGCCTAAGACGAAGGGAATTGTAGAAAACTACTTGTACAAGAAGTCTTCTAACAATGTCATCGTCGAAAACACACAATGTTGTGTTGCATAA
Coding sequence (CDS)
ATGGAAATTGCTCATATGGTCGATATAAATCCACCACCTTACTTGGAAGATATGTATCACTATGCTATCAAAATTGAAGATCAATTGAGGAAAAAAATGAGCATTCCAAAAAGATTGAATCAGTGCAACCAAAAGGGAAGTTTGGTGTTGCCAAACGAGTGGAGCAAGAGCTGCAATACCAAAAAGAATGAAGATCCAGTGGAGTCGAATGACGTTTGTGAGAAACATGATACACAACTTGAGGAAGAATCTAGAGCACATGATGGTGAATTTATTGAAAAAAATAACAAAGATTCTGATGTTGATGAAAGTAACCATGTACAAGTGAAGCCTAAGACGAAGGGAATTGTAGAAAACTACTTGTACAAGAAGTCTTCTAACAATGTCATCGTCGAAAACACACAATGTTGTGTTGCATAA
Protein sequence
MEIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCNQKGSLVLPNEWSKSCNTKKNEDPVESNDVCEKHDTQLEEESRAHDGEFIEKNNKDSDVDESNHVQVKPKTKGIVENYLYKKSSNNVIVENTQCCVA
Homology
BLAST of Moc05g22860 vs. NCBI nr
Match:
KAA0040926.1 (uncharacterized protein E6C27_scaffold125G00500 [Cucumis melo var. makuwa] >TYK10611.1 uncharacterized protein E5676_scaffold315G00780 [Cucumis melo var. makuwa])
HSP 1 Score: 65.9 bits (159), Expect = 3.2e-07
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCNQKGSLVLPNEWS-KSCNT 61
EIAH+VD NPP +EDMYHYAIKIE QL+++ KR +G V + +S NT
Sbjct: 88 EIAHLVDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRNESMQSRGKFVAAKKVEVESSNT 147
Query: 62 KKNEDPVESND-------VCEKHDTQLEEESRAH-DGEFIEKNNKDSDVDESNHVQVKPK 121
KK E E ++ CE++D QLEEE D E+IE+ N S + + VK K
Sbjct: 148 KKVEASKEVSEKTSSIQYECEENDAQLEEEYETPVDDEYIEEGNSISPITR-RVLNVKIK 207
Query: 122 TKGI--------VENYLYKKSSNNVIVENTQC 137
+ I + L + S +++++N C
Sbjct: 208 EEKIEDQRENLFLTRCLIEGSPCSLVIDNGSC 238
BLAST of Moc05g22860 vs. NCBI nr
Match:
XP_023520950.1 (uncharacterized protein LOC111784506, partial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 64.3 bits (155), Expect = 9.4e-07
Identity = 56/166 (33.73%), Postives = 70/166 (42.17%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCN---------QKGSLVLPN 61
EIAH+VD NPPPYLEDMYHYA+KIEDQL+++ KR K S V N
Sbjct: 11 EIAHLVDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSNTWNKDSFVNRN 70
Query: 62 E---------------------------------------W--------SKSCNTKK--- 104
E W SK C KK
Sbjct: 71 ESMSPKEKFVAAKRVEAESSIGKKNEASKTVKEKSSSIQCWKCKGFGHMSKECVNKKVMV 130
BLAST of Moc05g22860 vs. NCBI nr
Match:
XP_022153198.1 (uncharacterized protein LOC111020753 [Momordica charantia])
HSP 1 Score: 62.0 bits (149), Expect = 4.7e-06
Identity = 50/157 (31.85%), Postives = 65/157 (41.40%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCNQKGSLVLPNEWSK----- 61
EIAH VD NPPPYLEDMYHY +KIEDQL+++ KR ++ + N W+K
Sbjct: 234 EIAHAVDRNPPPYLEDMYHYVVKIEDQLKEEKEYSKRYT--SKANTYSNSNAWNKAGFVN 293
Query: 62 --------------------SCNTKKNEDP------------------------------ 97
S NTK+NE P
Sbjct: 294 RNESLQPKEKFVAAKRMEGESSNTKRNEAPKEVREKTSSIQCWKCKGFGHMSKDCVNKRV 353
BLAST of Moc05g22860 vs. NCBI nr
Match:
XP_023544048.1 (uncharacterized protein LOC111803745 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 61.6 bits (148), Expect = 6.1e-06
Identity = 51/155 (32.90%), Postives = 65/155 (41.94%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRL---------NQCNQKGSLVLPN 61
EIAH+VD NPPPYLEDMYHYA+KIEDQL+++ KR ++ K S V N
Sbjct: 102 EIAHLVDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTNIFSNSKTWNKDSFVNRN 161
Query: 62 E---------------------------------------WS--------KSCNTKK--- 97
E W K C KK
Sbjct: 162 ESMSPKEKFVAAKRVEAESSIGKKNEASKTVKEKSSSIQCWKCKGFGHMRKECVNKKIMV 221
BLAST of Moc05g22860 vs. NCBI nr
Match:
XP_022932136.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459, partial [Cucurbita moschata])
HSP 1 Score: 58.9 bits (141), Expect = 4.0e-05
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCNQKGSLVLPNEWSKSCNTK 61
EIAH+VD NPPPYLEDM HYA+KIEDQL+++ KR ++ + W+K
Sbjct: 199 EIAHLVDRNPPPYLEDMCHYALKIEDQLKEEKEHSKRYT--SRTNTFSNSKTWNKDSFVN 258
Query: 62 KNE 65
+NE
Sbjct: 259 RNE 259
BLAST of Moc05g22860 vs. ExPASy TrEMBL
Match:
A0A5A7TFV5 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00780 PE=4 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.6e-07
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCNQKGSLVLPNEWS-KSCNT 61
EIAH+VD NPP +EDMYHYAIKIE QL+++ KR +G V + +S NT
Sbjct: 88 EIAHLVDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRNESMQSRGKFVAAKKVEVESSNT 147
Query: 62 KKNEDPVESND-------VCEKHDTQLEEESRAH-DGEFIEKNNKDSDVDESNHVQVKPK 121
KK E E ++ CE++D QLEEE D E+IE+ N S + + VK K
Sbjct: 148 KKVEASKEVSEKTSSIQYECEENDAQLEEEYETPVDDEYIEEGNSISPITR-RVLNVKIK 207
Query: 122 TKGI--------VENYLYKKSSNNVIVENTQC 137
+ I + L + S +++++N C
Sbjct: 208 EEKIEDQRENLFLTRCLIEGSPCSLVIDNGSC 238
BLAST of Moc05g22860 vs. ExPASy TrEMBL
Match:
A0A6J1DGU9 (uncharacterized protein LOC111020753 OS=Momordica charantia OX=3673 GN=LOC111020753 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 2.3e-06
Identity = 50/157 (31.85%), Postives = 65/157 (41.40%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCNQKGSLVLPNEWSK----- 61
EIAH VD NPPPYLEDMYHY +KIEDQL+++ KR ++ + N W+K
Sbjct: 234 EIAHAVDRNPPPYLEDMYHYVVKIEDQLKEEKEYSKRYT--SKANTYSNSNAWNKAGFVN 293
Query: 62 --------------------SCNTKKNEDP------------------------------ 97
S NTK+NE P
Sbjct: 294 RNESLQPKEKFVAAKRMEGESSNTKRNEAPKEVREKTSSIQCWKCKGFGHMSKDCVNKRV 353
BLAST of Moc05g22860 vs. ExPASy TrEMBL
Match:
A0A6J1EVI6 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata OX=3662 GN=LOC111438459 PE=4 SV=1)
HSP 1 Score: 58.9 bits (141), Expect = 1.9e-05
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCNQKGSLVLPNEWSKSCNTK 61
EIAH+VD NPPPYLEDM HYA+KIEDQL+++ KR ++ + W+K
Sbjct: 199 EIAHLVDRNPPPYLEDMCHYALKIEDQLKEEKEHSKRYT--SRTNTFSNSKTWNKDSFVN 258
Query: 62 KNE 65
+NE
Sbjct: 259 RNE 259
BLAST of Moc05g22860 vs. ExPASy TrEMBL
Match:
A0A5A7UR86 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00210 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 3.3e-05
Identity = 56/182 (30.77%), Postives = 82/182 (45.05%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLRKKMSIPKRLNQCNQKGSLVLPNE-WSKSCNT 61
EIAH+VD NPP +EDMYHYAIKIE QL+++ KR +G V+ + ++S NT
Sbjct: 160 EIAHLVDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRNESMQSRGKFVVAQKVETESSNT 219
Query: 62 KKNE-------------------------------------DPVESNDVCEKHDTQLEEE 121
KK E ++S D CE++D QLEEE
Sbjct: 220 KKVEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGMIDSEDECEENDAQLEEE 279
Query: 122 SRAH-DGEFIEKNNKDSDVDESNHVQVKPKTKGIVE--------NYLYKKSSNNVIVENT 137
D E+IE+ + S + + VK K + I + L K S +++++N
Sbjct: 280 YETPVDDEYIEEGSSISLITR-RVLNVKIKEEKIEDQRENLFHTRCLIKGSPCSLVIDNG 339
BLAST of Moc05g22860 vs. ExPASy TrEMBL
Match:
A0A6J1DX75 (uncharacterized protein LOC111025303 OS=Momordica charantia OX=3673 GN=LOC111025303 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05
Identity = 51/155 (32.90%), Postives = 59/155 (38.06%), Query Frame = 0
Query: 2 EIAHMVDINPPPYLEDMYHYAIKIEDQLR----------------------KKMSIPKRL 61
EIAH VD NPP YLEDMYHYA+KIEDQ + KK R
Sbjct: 200 EIAHAVDRNPPSYLEDMYHYAVKIEDQSKEEKEYSKRYTYKANTYSNSNAWKKAGFVNRN 259
Query: 62 NQCNQKGSLVLPNEW-SKSCNTKKNEDP-------------------------------- 97
KG V +S NTKKNE P
Sbjct: 260 ESMQPKGKFVAAKRMEGESSNTKKNEAPKEVRENTSSIQCWKCKGFGHMSKDCVNKRVMV 319
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0040926.1 | 3.2e-07 | 36.18 | uncharacterized protein E6C27_scaffold125G00500 [Cucumis melo var. makuwa] >TYK1... | [more] |
XP_023520950.1 | 9.4e-07 | 33.73 | uncharacterized protein LOC111784506, partial [Cucurbita pepo subsp. pepo] | [more] |
XP_022153198.1 | 4.7e-06 | 31.85 | uncharacterized protein LOC111020753 [Momordica charantia] | [more] |
XP_023544048.1 | 6.1e-06 | 32.90 | uncharacterized protein LOC111803745 [Cucurbita pepo subsp. pepo] | [more] |
XP_022932136.1 | 4.0e-05 | 47.62 | LOW QUALITY PROTEIN: uncharacterized protein LOC111438459, partial [Cucurbita mo... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TFV5 | 1.6e-07 | 36.18 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A6J1DGU9 | 2.3e-06 | 31.85 | uncharacterized protein LOC111020753 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A6J1EVI6 | 1.9e-05 | 47.62 | LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata ... | [more] |
A0A5A7UR86 | 3.3e-05 | 30.77 | Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430... | [more] |
A0A6J1DX75 | 4.3e-05 | 32.90 | uncharacterized protein LOC111025303 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
Match Name | E-value | Identity | Description | |