MS026123 (gene) Bitter gourd (TR) v1

InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Position :
0
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ATGGACTCCGACGAAGGGAAGCTTTTCATCGGAGGAATAGCGTGGGACACCTCCGAGGAGAAGCTCAGGGACTATTTCAGCCAATTTGGCGATGTTATCCAAGCCGTTATCATGCGCGACAAGACCACTGGCCGTCCCCGCGGGTTCGGCTTCGTCGTTTTCTCTGATCCTTCCGCTCTTGATCAGGTTCTTCAGGATAAGCACACCATCGATGGCCGCCAGGTGGAGGCAAAAAGGGCGTTATCAAGAGAGGAACAACAAACTTCCTCTAGAAGTGGGAGTTTTAACTCTGGCAGAAGCTCCGGAGGTAGTGGATATTTTAGGACCAAAAAAATATTTGTGGGAGGTCTGCCTTCGGCACTAACTGAAGATGGGTTCCGACAGTATTTTGAAAATTATGGCCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAGAGACCTCGTGGATTTGGTTTCATAACTTTTGACAATGAAGATTCTGTTGATAGAGTACTTTATAAGAGCTTTCATGAACTGAATGGTAAACTTGTAGAGGTGAAACGTGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGGCGTGGAGGCTATCAGAATTATGGTGCTTCTGGCACTAACGTTAACAACTTTGATGGTAGATCAGATGGTAATAGATATATGCAACCTCAGTCTACTGCTGGCGGTTTCCCCCCATATTCTGGATATAGTGTATCAAGTTATGGGTATGGAGGACCAAACAGTGGCGTTCCTTATGGAAGTTATGGTAGTTATGGTGTTGGTATGTATGGTGGTGCTAGTGCTGGATTTGGTGGTCCAGCTGGACCATTTGGAAATCCAAGTGCAGTCAATGCTGGTTATCTAAGTGGAGCACCTGGGGGCATGAAAAGTACTTGGACCAATCAAGCTCCTGGATATGGTGGCCCTGGCTATGGTGCTAGTCCAGGCTTTGGGGCTGCAGCTCCTTGGAGTGGCTCAGGTGCTGGTGGACCTCCTTCTGCTCCGAGGGGCCAATCTCCTAGTGGGGCTTCTGGGTATGGGAATCAAGGTTATTATGGTGGAAGTGATGGTCCTTATGGTGGCTATGGAGCCTCTGGTGGACGAGCTACGAGCACCCCAAATAGCAATGTTGGTAGTGGTTCAAGTGGAGAGCCACATGGCATGAGTGGTGGTGGGTACATGGGGAGTGGCTATGGTGACACCAATGGAAATTCAGGTTACTCTAGTGGTGGCTGGCGATCTGATGCTTCACAGACTCCTGGTGCTTATGGTGGTGGATATGGTGGCACTCAGTCCAGGCATGGTTAA1002003004005006007008009001000110012001300Expect = 5.3E-24 / Score = 95.7Expect = 5.3E-24 / Score = 95.7Expect = 2.5E-17 / Score = 62.5Expect = 1.0E-16 / Score = 60.5Score = 18.171562Score = 18.290949Expect = 7.3E-26 / Score = 92.2Expect = 2.7E-27 / Score = 97.5Score = Score = Score = Score = Score = Score = Score = Score = Expect = 1.36468E-37 / Score = 129.243Expect = 6.29467E-45 / Score = 149.053Score = Score = SequenceSM00360PF00076PS50102PS50102G3DSA:3.30.70.330G3DSA:3.30.70.330mobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litePTHR48035PTHR48035:SF1cd12325cd12327SSF54928SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 111..183
e-value: 5.3E-24
score: 95.7
coord: 7..78
e-value: 5.3E-24
score: 95.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 8..75
e-value: 2.5E-17
score: 62.5
coord: 112..178
e-value: 1.0E-16
score: 60.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 6..82
score: 18.171562
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 110..187
score: 18.290949
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 109..191
e-value: 7.3E-26
score: 92.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..108
e-value: 2.7E-27
score: 97.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103
NoneNo IPR availablePANTHERPTHR48035HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1coord: 1..436
NoneNo IPR availablePANTHERPTHR48035:SF1SUBFAMILY NOT NAMEDcoord: 1..436
NoneNo IPR availableCDDcd12325RRM1_hnRNPA_hnRNPD_likecoord: 8..78
e-value: 1.36468E-37
score: 129.243
IPR034131DAZ-associated protein 1, RNA recognition motif 2CDDcd12327RRM2_DAZAP1coord: 108..187
e-value: 6.29467E-45
score: 149.053
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..106
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 109..212