MS026123.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS026123.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	scaffold1150: 346388 .. 348657 (+)
Sequence length	1314
RNA-Seq Expression	MS026123.1
Synteny	MS026123.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCGACGAAGGGAAGCTTTTCATCGGAGGAATAGCGTGGGACACCTCCGAGGAGAAGCTCAGGGACTATTTCAGCCAATTTGGCGATGTTATCCAAGCCGTTATCATGCGCGACAAGACCACTGGCCGTCCCCGCGGGTTCGGCTTCGTCGTTTTCTCTGATCCTTCCGCTCTTGATCAGGTTCTTCAGGATAAGCACACCATCGATGGCCGCCAGGTTTTCCCTCCTCTCCTGCAATTCAATATGCATTAATTCGTTGCTTAATTAGGTTTCTTTTCCTCGACAGCTTTACTTCTTGAAGTTATCATTATGAGGATTTCGGGAATCGTGTTCTTGTAAGCTGTAATAGTGATTGATTACTGATTACTTTAAATTAGGTCCTCAATATTAACAGTGGTTCTCTAGTGAAACCCATTCTCAGTCCCCTTTTATCTCATCAGCTTGTAATTGGTTTACTTTACTGTTATCGACTCTGGCCTAGGAATGGTCCTAAACAGTAAGGAACTGGTCAGAATAGTTTATTTTAACGCTTGGGTTATTTCGTCTTTGGCGATTCCCCCTTCCTCTTTCAACTGCTAGGGAAGTTGGAATTGCGCTATAGGATCATTTTATAATTGGTACCCTTCTCAATTGTATAGTTAACTCGGTTCATTAGTAATCGTATTTCCTAGGGTTCTAGACTTTGTAAGTACTTCCATTAGCTTATGCGAAATTTGGTTCTGTGGTTTATGATTCGTTTGATACTGGAACACATGAGCTGTATCTTATCGGGCTGATAGTGAACTCTTATGACAGTTATACCGCCACATGATACTAGATTTTTTCTTCGTGATTTTTGGACCAAAGTGAATGTATCCCTACTTTGGGAAGGAACCTGTATGCCTGAGGAGTTGATTATCTAGCACATGCCTTTCTGGTTCCTGTACTTGCACTTTAGCAAGTCAATTTAGGTTTGAGTGAGGGAGTCAATAGACGTCAACTTAACCCATCATGACATATGATTATGTATAGATATTGTTGAAAATCTTGCAAAATTTTATATTTTCTAGCTTGCTACGAGTTTCATGACAACTGATAAGGATGATGACATGTGCATGCAGTGAATTCGTCTCCTTTATTTGCATTCCCACGAGGTCTTCTCAGCAATTTTAAAATTTTCTTTGTTGACACAGGTGGAGGCAAAAAGGGCGTTATCAAGAGAGGAACAACAAACTTCCTCTAGAAGTGGGAGTTTTAACTCTGGCAGAAGCTCCGGAGGTAGTGGATATTTTAGGACCAAAAAAATATTTGTGGGAGGTCTGCCTTCGGCACTAACTGAAGATGGGTTCCGACAGTATTTTGAAAATTATGGCCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAGAGACCTCGTGGATTTGGTTTCATAACTTTTGACAATGAAGATTCTGTTGATAGAGTACTTTATAAGAGCTTTCATGAACTGAATGGTAAACTTGTAGAGGTGAAACGTGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGGCGTGGAGGCTATCAGAATTATGGTGCTTCTGGCACTAACGTTAACAACTTTGATGGTAGATCAGATGGTAATAGATATATGCAACCTCAGTCTACTGCTGGCGGTTTCCCCCCATATTCTGGATATAGTGTATCAAGTTATGGGTATGGAGGACCAAACAGTGGCGTTCCTTATGGAAGTTATGGTAGTTATGGTGTTGGTATGTATGGTGGTGCTAGTGCTGGATTTGGTGGTCCAGCTGGACCATTTGGAAATCCAAGTGCAGTCAATGCTGGTTATCTAAGTGGAGCACCTGGGGGCATGAAAAGTACTTGGACCAATCAAGCTCCTGGATATGGTGGCCCTGGCTATGGTGCTAGTCCAGGCTTTGGGGCTGCAGCTCCTTGGAGTGGCTCAGGTGCTGGTGGACCTCCTTCTGCTCCGAGGGGCCAATCTCCTAGTGGGGCTTCTGGGTATGGGAATCAAGGTTATTATGGTGGAAGTGATGGTCCTTATGGTGGCTATGGAGCCTCTGGTGGACGAGCTACGAGCACCCCAAATAGCAATGTTGGTAGTGGTTCAAGTGGAGAGCCACATGGCATGAGTGGTGGTGGGTACATGGGGAGTGGCTATGGTGACACCAATGGAAATTCAGGTTACTCTAGTGGTGGCTGGCGATCTGATGCTTCACAGACTCCTGGTGCTTATGGTGGTGGATATGGTGGCACTCAGTCCAGGCATGGTTAA

mRNA sequence

ATGGACTCCGACGAAGGGAAGCTTTTCATCGGAGGAATAGCGTGGGACACCTCCGAGGAGAAGCTCAGGGACTATTTCAGCCAATTTGGCGATGTTATCCAAGCCGTTATCATGCGCGACAAGACCACTGGCCGTCCCCGCGGGTTCGGCTTCGTCGTTTTCTCTGATCCTTCCGCTCTTGATCAGGTTCTTCAGGATAAGCACACCATCGATGGCCGCCAGGTGGAGGCAAAAAGGGCGTTATCAAGAGAGGAACAACAAACTTCCTCTAGAAGTGGGAGTTTTAACTCTGGCAGAAGCTCCGGAGGTAGTGGATATTTTAGGACCAAAAAAATATTTGTGGGAGGTCTGCCTTCGGCACTAACTGAAGATGGGTTCCGACAGTATTTTGAAAATTATGGCCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAGAGACCTCGTGGATTTGGTTTCATAACTTTTGACAATGAAGATTCTGTTGATAGAGTACTTTATAAGAGCTTTCATGAACTGAATGGTAAACTTGTAGAGGTGAAACGTGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGGCGTGGAGGCTATCAGAATTATGGTGCTTCTGGCACTAACGTTAACAACTTTGATGGTAGATCAGATGGTAATAGATATATGCAACCTCAGTCTACTGCTGGCGGTTTCCCCCCATATTCTGGATATAGTGTATCAAGTTATGGGTATGGAGGACCAAACAGTGGCGTTCCTTATGGAAGTTATGGTAGTTATGGTGTTGGTATGTATGGTGGTGCTAGTGCTGGATTTGGTGGTCCAGCTGGACCATTTGGAAATCCAAGTGCAGTCAATGCTGGTTATCTAAGTGGAGCACCTGGGGGCATGAAAAGTACTTGGACCAATCAAGCTCCTGGATATGGTGGCCCTGGCTATGGTGCTAGTCCAGGCTTTGGGGCTGCAGCTCCTTGGAGTGGCTCAGGTGCTGGTGGACCTCCTTCTGCTCCGAGGGGCCAATCTCCTAGTGGGGCTTCTGGGTATGGGAATCAAGGTTATTATGGTGGAAGTGATGGTCCTTATGGTGGCTATGGAGCCTCTGGTGGACGAGCTACGAGCACCCCAAATAGCAATGTTGGTAGTGGTTCAAGTGGAGAGCCACATGGCATGAGTGGTGGTGGGTACATGGGGAGTGGCTATGGTGACACCAATGGAAATTCAGGTTACTCTAGTGGTGGCTGGCGATCTGATGCTTCACAGACTCCTGGTGCTTATGGTGGTGGATATGGTGGCACTCAGTCCAGGCATGGTTAA

Coding sequence (CDS)

ATGGACTCCGACGAAGGGAAGCTTTTCATCGGAGGAATAGCGTGGGACACCTCCGAGGAGAAGCTCAGGGACTATTTCAGCCAATTTGGCGATGTTATCCAAGCCGTTATCATGCGCGACAAGACCACTGGCCGTCCCCGCGGGTTCGGCTTCGTCGTTTTCTCTGATCCTTCCGCTCTTGATCAGGTTCTTCAGGATAAGCACACCATCGATGGCCGCCAGGTGGAGGCAAAAAGGGCGTTATCAAGAGAGGAACAACAAACTTCCTCTAGAAGTGGGAGTTTTAACTCTGGCAGAAGCTCCGGAGGTAGTGGATATTTTAGGACCAAAAAAATATTTGTGGGAGGTCTGCCTTCGGCACTAACTGAAGATGGGTTCCGACAGTATTTTGAAAATTATGGCCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAGAGACCTCGTGGATTTGGTTTCATAACTTTTGACAATGAAGATTCTGTTGATAGAGTACTTTATAAGAGCTTTCATGAACTGAATGGTAAACTTGTAGAGGTGAAACGTGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGGCGTGGAGGCTATCAGAATTATGGTGCTTCTGGCACTAACGTTAACAACTTTGATGGTAGATCAGATGGTAATAGATATATGCAACCTCAGTCTACTGCTGGCGGTTTCCCCCCATATTCTGGATATAGTGTATCAAGTTATGGGTATGGAGGACCAAACAGTGGCGTTCCTTATGGAAGTTATGGTAGTTATGGTGTTGGTATGTATGGTGGTGCTAGTGCTGGATTTGGTGGTCCAGCTGGACCATTTGGAAATCCAAGTGCAGTCAATGCTGGTTATCTAAGTGGAGCACCTGGGGGCATGAAAAGTACTTGGACCAATCAAGCTCCTGGATATGGTGGCCCTGGCTATGGTGCTAGTCCAGGCTTTGGGGCTGCAGCTCCTTGGAGTGGCTCAGGTGCTGGTGGACCTCCTTCTGCTCCGAGGGGCCAATCTCCTAGTGGGGCTTCTGGGTATGGGAATCAAGGTTATTATGGTGGAAGTGATGGTCCTTATGGTGGCTATGGAGCCTCTGGTGGACGAGCTACGAGCACCCCAAATAGCAATGTTGGTAGTGGTTCAAGTGGAGAGCCACATGGCATGAGTGGTGGTGGGTACATGGGGAGTGGCTATGGTGACACCAATGGAAATTCAGGTTACTCTAGTGGTGGCTGGCGATCTGATGCTTCACAGACTCCTGGTGCTTATGGTGGTGGATATGGTGGCACTCAGTCCAGGCATGGTTAA

Protein sequence

MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSALDQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSALTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLVEVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSVSSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKSTWTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGPYGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQTPGAYGGGYGGTQSRHG

Homology

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BLAST of MS026123.1 vs. NCBI nr
Match: XP_022155643.1 (heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia] >XP_022155644.1 heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia])

HSP 1 Score: 842.0 bits (2174), Expect = 2.3e-240
Identity = 436/437 (99.77%), Postives = 436/437 (99.77%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYGASGGRATS PNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGASGGRATSAPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPGAYGGGYGGTQSRHG
Sbjct: 421 TPGAYGGGYGGTQSRHG 437

[Close]

BLAST of MS026123.1 vs. NCBI nr
Match: XP_038887503.1 (heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida])

HSP 1 Score: 792.0 bits (2044), Expect = 2.7e-225
Identity = 411/437 (94.05%), Postives = 419/437 (95.88%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFG+VIQAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSG  NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFE+YGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN NNFDGRSD NRYMQPQSTAGGFPPYSGY V
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDSNRYMQPQSTAGGFPPYSGYGV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGA+AGFGGPAGPFGNPSAVNAGYLSGAPG MKS+
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           W NQAPGYGGPGYGASPGFGAAAPWS SG GGPPSAPRGQSPSGASGYGNQGYYGG+DG 
Sbjct: 301 WANQAPGYGGPGYGASPGFGAAAPWSASGTGGPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYGASGGR  S PNSNVG+G SGE HGMS GGYMGSGYGDTNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGASGGRGASAPNSNVGTGQSGEQHGMS-GGYMGSGYGDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPG YGGGYGGTQSRHG
Sbjct: 421 TPGGYGGGYGGTQSRHG 436

[Close]

BLAST of MS026123.1 vs. NCBI nr
Match: XP_004151998.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN58288.1 hypothetical protein Csa_017483 [Cucumis sativus])

HSP 1 Score: 783.9 bits (2023), Expect = 7.3e-223
Identity = 407/437 (93.14%), Postives = 418/437 (95.65%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFG+VIQAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSG  NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFE+YGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGR GYQNYGASGTN N+FDGRSDGNRYMQPQSTAGGFPPYSGYSV
Sbjct: 181 EVKRALPKDANPGSGGRAGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           S YGYGGPNSGVPYGSYGSYGVGMYGGA+AGFGGPAGPFGNP AVNAGYLSGAPG MKS+
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           WTNQAPGYGGPGYGASPGFGAAAPW+ SG G PPSAPRGQSPSGASGYGNQGYYGG+DG 
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYGASGGRA S PNSNVG+G SGE HG+S GGYMGSGYGDTNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGASGGRAASAPNSNVGTGQSGEQHGVS-GGYMGSGYGDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPG YGGGYGG QSRHG
Sbjct: 421 TPGGYGGGYGGNQSRHG 436

[Close]

BLAST of MS026123.1 vs. NCBI nr
Match: XP_022931105.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata])

HSP 1 Score: 781.6 bits (2017), Expect = 3.6e-222
Identity = 407/437 (93.14%), Postives = 417/437 (95.42%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEE LR YF+QFG+VIQAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEETLRGYFAQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGS+NSGRSSGGSGYF+TKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSYNSGRSSGGSGYFKTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVL KSFHELNGKLV
Sbjct: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLCKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGRGGYQNYG+SGTN NNFDGR+DGNRYMQ QSTAGGFPPYSGY V
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGSSGTNANNFDGRADGNRYMQAQSTAGGFPPYSGYGV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPA PFGNP+AVNAGYLSGA G MKS+
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAVPFGNPTAVNAGYLSGAHGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           WTNQAPGYGGPGYGASPGFGAAAPWS SG G PPSAPRGQSPSGASGYGNQGYYGG+DGP
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWSASGTGVPPSAPRGQSPSGASGYGNQGYYGGNDGP 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYG SGGRATS PNSNVGSG SGEPHG S GGYMGSGY DTNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGTSGGRATSAPNSNVGSGQSGEPHGTS-GGYMGSGYDDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPG YGGGYGGTQSRHG
Sbjct: 421 TPGGYGGGYGGTQSRHG 436

[Close]

BLAST of MS026123.1 vs. NCBI nr
Match: KAG6606360.1 (Protein NRT1/ PTR FAMILY 5.2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 781.2 bits (2016), Expect = 4.7e-222
Identity = 407/436 (93.35%), Postives = 416/436 (95.41%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEE LR YF+QFG+VIQAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEETLRGYFAQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGS+NSGRSSGGSGYF+TKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSYNSGRSSGGSGYFKTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVL KSFHELNGKLV
Sbjct: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLCKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGRGGYQNYG+SGTN NNFDGRSDGNRYMQ QSTAGGFPPYSGY V
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGSSGTNANNFDGRSDGNRYMQAQSTAGGFPPYSGYGV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPA PFGNP+AVNAGYLSGA G MKS+
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAVPFGNPTAVNAGYLSGAHGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           WTNQAPGYGGPGYGASPGFGAAAPWS SG G PPSAPRGQSPSGASGYGNQGYYGG+DGP
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWSASGTGVPPSAPRGQSPSGASGYGNQGYYGGNDGP 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYG SGGRATS PNSNVGSG SGEPHG S GGYMGSGY DTNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGTSGGRATSAPNSNVGSGQSGEPHGTS-GGYMGSGYDDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRH 437
           TPG YGGGYGGTQSRH
Sbjct: 421 TPGGYGGGYGGTQSRH 435

[Close]

BLAST of MS026123.1 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 4.5e-106
Identity = 249/457 (54.49%), Postives = 301/457 (65.86%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSD+GKLF+GGI+W+T E+KLR++F+ +G+V QA++MRDK TGRPRGFGFV+FSDPS L
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQ+KH+ID R+V+ KRA+SREEQQ S R+G+ N+ RSSGG  Y +TKKIFVGGLP  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LT++ FRQYFE YG VTDV IMYDQ T RPRGFGF++FD+ED+VD VL+K+FH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGSGGR-------GGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFP 240
           EVKRALPKDANPG GGR       GGYQ YG    N +++DGR D NR++Q QS   G P
Sbjct: 181 EVKRALPKDANPGGGGRSMGGGGSGGYQGYGG---NESSYDGRMDSNRFLQHQSVGNGLP 240

Query: 241 PY--SGYSVSSYGYGGPNSGVPYGSYGSY--GVGMYG-GASAGFGGPAGPFGNPSAVNAG 300
            Y  SGY     GYG  ++G  YG+YG Y    G YG GA+AG+G    P        AG
Sbjct: 241 SYGSSGYGA---GYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIP-------GAG 300

Query: 301 YLSGAPGGMKSTW-TNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASG 360
           Y S      +++W T  + GYG PGYG+    GAA     SG G P +AP  QSP   SG
Sbjct: 301 YGSSTGVAPRNSWDTPASSGYGNPGYGS----GAA----HSGYGVPGAAPPTQSP---SG 360

Query: 361 YGNQGY----YGGSDGPYG---GYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGY 420
           Y NQGY    Y GSD  YG    YG  GGR +   ++N GS           GGYMG GY
Sbjct: 361 YSNQGYGYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGS-----------GGYMGGGY 410

Query: 421 GDTNGNSGYSSGGWRSDASQTPGAYGGGYGGTQSRHG 438
           GD         G WRSD SQ    YGGGY   Q R G
Sbjct: 421 GD---------GSWRSDPSQ---GYGGGYNDGQGRQG 410

[Close]

BLAST of MS026123.1 vs. ExPASy Swiss-Prot
Match: P51968 (Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.3e-40
Identity = 150/414 (36.23%), Postives = 200/414 (48.31%), Query Frame = 0


Query: 7   KLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSALDQVLQD 66
           KLFIGG++++T+++ LR++F Q+G +   V+MRD  T R RGFGFV +S    +D  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 67  K-HTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSALTEDG 126
           + H +DGR VE KRA+SRE+   S+R G+           +   KKIFVGG+     E  
Sbjct: 88  RPHKVDGRVVEPKRAVSRED---SARPGA-----------HLTVKKIFVGGIKEDTEEYH 147

Query: 127 FRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLVEVKRA 186
            R Y E+YG++  + +M D+ + + RGF F+TFD+ D+VD+++ + +H +NG   EVK+A
Sbjct: 148 LRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 207

Query: 187 LPKD----ANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSVS 246
           L K     A+   G  GG  N+   G N    DG + G      +   GGF    G    
Sbjct: 208 LSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGGNFG------RGGGGGFGNRGG---- 267

Query: 247 SYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKSTW 306
            YG GG   G      G YG G  G    GFGG  G +G              GG     
Sbjct: 268 -YGGGGGRGG------GGYGGG--GDGYNGFGGDGGNYG--------------GG----- 327

Query: 307 TNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGPY 366
               PGYGG GYG SPG+G      G G G            G  GY   G +GG  G Y
Sbjct: 328 ----PGYGGRGYGGSPGYGNQGGGYGGGGG------------GYDGYNESGNFGG--GNY 371

Query: 367 GGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWR 416
             +G  GG+  S      G   SG   G SG G  G GYG   G  G  S G R
Sbjct: 388 NDFGNYGGQQQSNYGPMKGGSFSGRSSGGSGSGPYGGGYGSGGGGGGGGSYGGR 371

[Close]

BLAST of MS026123.1 vs. ExPASy Swiss-Prot
Match: Q98SJ2 (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.8e-39
Identity = 138/378 (36.51%), Postives = 180/378 (47.62%), Query Frame = 0


Query: 6   GKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSALDQVLQ 65
           GKLF+GG+ W T++E LR YFSQ+G+V+  VIM+DKTT + RGFGFV F DP+ +  VL 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  DK-HTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSALTED 125
            + HT+DGR ++ K    R  Q   SR       +    +   R+ KIFVGG+P    E 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERSRPRE-GWQQKEPRTENSRSNKIFVGGIPHNCGET 129

Query: 126 GFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLVEVKR 185
             ++YF  +G VT+VV++YD   QRPRGFGFITF++E SVD+ +   FH++ GK VEVKR
Sbjct: 130 ELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 189

Query: 186 ALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGF---PPYSGYSVS 245
           A P+D+   + G  G   +G+                    QSTA G+   PP +    S
Sbjct: 190 AEPRDSKSQTPGPPGSNQWGSRAM-----------------QSTANGWTGQPPQTWQGYS 249

Query: 246 SYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGP--------------AGPFGNPSAVNA 305
             G   P +G   G YG           AG GGP               GPF  P     
Sbjct: 250 PQGMWMP-TGQTIGGYGQ---------PAGRGGPPPPPSFAPFLVSTTPGPFPPPQGFPP 309

Query: 306 GYLSGAPGGMKSTWTNQAPGYGGP----------GYGASPGFGAAAPWS-----GSGAGG 351
           GY +  P G          GYG P          G    PG   AAP +     G  A  
Sbjct: 310 GYATPPPFGY---------GYGPPPPPPDQFVSSGVPPPPGTPGAAPLAFPPPPGQSAQD 350

[Close]

BLAST of MS026123.1 vs. ExPASy Swiss-Prot
Match: P51992 (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-38
Identity = 159/430 (36.98%), Postives = 208/430 (48.37%), Query Frame = 0


Query: 7   KLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSALDQVLQD 66
           KLFIGG++++T+++ LR++F Q+G +   V+MRD  T R RGFGFV +S    +D  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 67  K-HTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSALTEDG 126
           + H +DGR VE KRA+SRE+   S+R G+           +   KKIFVGG+     E  
Sbjct: 88  RPHKVDGRVVEPKRAVSRED---SARPGA-----------HLTVKKIFVGGIKEDTEEYH 147

Query: 127 FRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLVEVKRA 186
            R YFE YG++  + +M D+ + + RGF F+TFD+ D+VD+++ + +H +N    EVK+A
Sbjct: 148 LRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKKA 207

Query: 187 LPKD----ANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSVS 246
           L K     A+   G  GG  N+   G N    DG   GN         GGF    G    
Sbjct: 208 LSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGGGGGN-----FGRGGGFGNRGG---- 267

Query: 247 SYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKSTW 306
            YG GG       G  G YG G  G    GFGG  G +G              GG     
Sbjct: 268 -YGGGG-------GRGGGYGGG--GDGYNGFGGDGGNYG--------------GG----- 327

Query: 307 TNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGPY 366
               PGYGG GYG SPG+G      G G GG      G    G  GY   G +GG  G Y
Sbjct: 328 ----PGYGGRGYGGSPGYGNQGGGYGGGGGG-----GGAGGGGYDGYNEGGNFGG--GNY 382

Query: 367 GGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQT 426
             +G+ GG+      SN G   +G   G S GG  GS  G   G  GY SGG        
Sbjct: 388 NDFGSYGGQ----QQSNYGPMKAGNFSGRSTGGSGGSSSGPYGG--GYGSGGGGG----- 382

Query: 427 PGAYGGGYGG 432
            G  GG YGG
Sbjct: 448 -GGGGGSYGG 382

[Close]

BLAST of MS026123.1 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.2e-38
Identity = 150/416 (36.06%), Postives = 198/416 (47.60%), Query Frame = 0


Query: 6   GKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSALDQVLQ 65
           GKLF+GG+ W T++E LR YFSQ+G+V+  VIM+DKTT + RGFGFV F DP+ +  VL 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  DK-HTIDGRQVEAKRALSR--EEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSALT 125
            + HT+DGR ++ K    R  + ++T  + G     RS       ++ KIFVGG+P    
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNS----KSNKIFVGGIPHNCG 129

Query: 126 EDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLVEV 185
           E   R+YF+ +G VT+VV++YD   QRPRGFGFITF++E SVD+ +   FH++ GK VEV
Sbjct: 130 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 189

Query: 186 KRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAG--GFPPYSGYSV 245
           KRA P+D+   + G+ G   +G+                 + P +  G  G PP      
Sbjct: 190 KRAEPRDSKSQAPGQPGASQWGSR----------------VVPNAANGWAGQPP----PT 249

Query: 246 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGP--------------FGNPSAVN 305
              GYG     VP G      +G YG   AG G P  P              F  P    
Sbjct: 250 WQQGYGPQGMWVPAGQ----AIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFP 309

Query: 306 AGYLSGAPGGMKSTWTNQAP---GYGGPGYGASPGFGAAAPWSGSGAGGPPS--APRGQS 365
            GY  GAP      +    P    +  PG    P    AAP +      PPS  AP    
Sbjct: 310 QGY--GAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLA---FPPPPSQAAPDMSK 369

Query: 366 PSGASGYGNQGYYGGSDGPYGGYGASGGRATSTPNSNVG---SGSSGEPHGMSGGG 395
           P  A      G Y G      G+G      +  P S  G    GS G P G SG G
Sbjct: 370 PPTAQPDFPYGQYAGYGQDLSGFGQGFSDPSQQPPSYGGPSVPGSGGPPAGGSGFG 392

[Close]

BLAST of MS026123.1 vs. ExPASy TrEMBL
Match: A0A6J1DNH8 (heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN=LOC111022725 PE=4 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 1.1e-240
Identity = 436/437 (99.77%), Postives = 436/437 (99.77%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYGASGGRATS PNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGASGGRATSAPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPGAYGGGYGGTQSRHG
Sbjct: 421 TPGAYGGGYGGTQSRHG 437

[Close]

BLAST of MS026123.1 vs. ExPASy TrEMBL
Match: A0A0A0L8W1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608180 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.5e-223
Identity = 407/437 (93.14%), Postives = 418/437 (95.65%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFG+VIQAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSG  NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFE+YGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGR GYQNYGASGTN N+FDGRSDGNRYMQPQSTAGGFPPYSGYSV
Sbjct: 181 EVKRALPKDANPGSGGRAGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           S YGYGGPNSGVPYGSYGSYGVGMYGGA+AGFGGPAGPFGNP AVNAGYLSGAPG MKS+
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           WTNQAPGYGGPGYGASPGFGAAAPW+ SG G PPSAPRGQSPSGASGYGNQGYYGG+DG 
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYGASGGRA S PNSNVG+G SGE HG+S GGYMGSGYGDTNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGASGGRAASAPNSNVGTGQSGEQHGVS-GGYMGSGYGDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPG YGGGYGG QSRHG
Sbjct: 421 TPGGYGGGYGGNQSRHG 436

[Close]

BLAST of MS026123.1 vs. ExPASy TrEMBL
Match: A0A6J1EYJ4 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437391 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.8e-222
Identity = 407/437 (93.14%), Postives = 417/437 (95.42%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEE LR YF+QFG+VIQAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEETLRGYFAQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGS+NSGRSSGGSGYF+TKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSYNSGRSSGGSGYFKTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVL KSFHELNGKLV
Sbjct: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLCKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGRGGYQNYG+SGTN NNFDGR+DGNRYMQ QSTAGGFPPYSGY V
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGSSGTNANNFDGRADGNRYMQAQSTAGGFPPYSGYGV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPA PFGNP+AVNAGYLSGA G MKS+
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAVPFGNPTAVNAGYLSGAHGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           WTNQAPGYGGPGYGASPGFGAAAPWS SG G PPSAPRGQSPSGASGYGNQGYYGG+DGP
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWSASGTGVPPSAPRGQSPSGASGYGNQGYYGGNDGP 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYG SGGRATS PNSNVGSG SGEPHG S GGYMGSGY DTNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGTSGGRATSAPNSNVGSGQSGEPHGTS-GGYMGSGYDDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPG YGGGYGGTQSRHG
Sbjct: 421 TPGGYGGGYGGTQSRHG 436

[Close]

BLAST of MS026123.1 vs. ExPASy TrEMBL
Match: A0A1S3BHX8 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103489847 PE=4 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 3.9e-222
Identity = 404/437 (92.45%), Postives = 416/437 (95.19%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFG+VIQAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSG  NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFE+YGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN N+FDGRSDGNRYMQPQSTAGGFPPYSGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           S YGYGGPNSGVPYGSYGSYGVGMYGGA+AGFGGPAGPFGNP AVNAGYLSGAPG MKS+
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           WTNQAPGYGGPGYGASPGFGAAAPW+ SG G PPSAPRGQSPSGASGYGNQGYYGG+DG 
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYGASGGR+ S PNSNVG+G SGE HGMS GGYMGSGYGD NGNSGY+ GGWRSD SQ
Sbjct: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMS-GGYMGSGYGDANGNSGYTGGGWRSDVSQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPG YGGGYGG QSRHG
Sbjct: 421 TPGGYGGGYGGNQSRHG 436

[Close]

BLAST of MS026123.1 vs. ExPASy TrEMBL
Match: A0A6J1HIF4 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463883 PE=4 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 6.7e-222
Identity = 406/437 (92.91%), Postives = 417/437 (95.42%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFSQFG+V QAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSQFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSG +NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFE+YGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN NNFDGRSDGNRYMQPQSTAGGFPPY+GYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGA+ GFGGPAGPFGNPSAVNAGYLSGAPG MKS+
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360
           W NQAPGYGGPGYGASPGFGA APWS SG  GPP APRGQSPSGASGYGNQGYYGG+DG 
Sbjct: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPP-APRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420
           YGGYG SGGRA S PNSNVGSG SGE HGM+ GGYMGSGYG+TNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGTSGGRAASGPNSNVGSGQSGESHGMT-GGYMGSGYGETNGNSGYSSGGWRSDASQ 420

Query: 421 TPGAYGGGYGGTQSRHG 438
           TPG YGGGYGGTQSRHG
Sbjct: 421 TPGGYGGGYGGTQSRHG 435

[Close]

BLAST of MS026123.1 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 386.3 bits (991), Expect = 3.2e-107
Identity = 249/457 (54.49%), Postives = 301/457 (65.86%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           MDSD+GKLF+GGI+W+T E+KLR++F+ +G+V QA++MRDK TGRPRGFGFV+FSDPS L
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQ+KH+ID R+V+ KRA+SREEQQ S R+G+ N+ RSSGG  Y +TKKIFVGGLP  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LT++ FRQYFE YG VTDV IMYDQ T RPRGFGF++FD+ED+VD VL+K+FH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGSGGR-------GGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFP 240
           EVKRALPKDANPG GGR       GGYQ YG    N +++DGR D NR++Q QS   G P
Sbjct: 181 EVKRALPKDANPGGGGRSMGGGGSGGYQGYGG---NESSYDGRMDSNRFLQHQSVGNGLP 240

Query: 241 PY--SGYSVSSYGYGGPNSGVPYGSYGSY--GVGMYG-GASAGFGGPAGPFGNPSAVNAG 300
            Y  SGY     GYG  ++G  YG+YG Y    G YG GA+AG+G    P        AG
Sbjct: 241 SYGSSGYGA---GYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIP-------GAG 300

Query: 301 YLSGAPGGMKSTW-TNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASG 360
           Y S      +++W T  + GYG PGYG+    GAA     SG G P +AP  QSP   SG
Sbjct: 301 YGSSTGVAPRNSWDTPASSGYGNPGYGS----GAA----HSGYGVPGAAPPTQSP---SG 360

Query: 361 YGNQGY----YGGSDGPYG---GYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGY 420
           Y NQGY    Y GSD  YG    YG  GGR +   ++N GS           GGYMG GY
Sbjct: 361 YSNQGYGYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGS-----------GGYMGGGY 410

Query: 421 GDTNGNSGYSSGGWRSDASQTPGAYGGGYGGTQSRHG 438
           GD         G WRSD SQ    YGGGY   Q R G
Sbjct: 421 GD---------GSWRSDPSQ---GYGGGYNDGQGRQG 410

[Close]

BLAST of MS026123.1 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-106
Identity = 249/444 (56.08%), Postives = 296/444 (66.67%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           M+SD+GKLFIGGI+WDT E  LR+YFS FG+V+Q  +MR+K TGRPRGFGFV FSDP+ +
Sbjct: 1   MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQDKH ID R V+ KRA+SREEQ  + RSG+FN+ R+       RTKKIFVGGLP A
Sbjct: 61  DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPA 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           LT D FR YFE YG V+D VIM DQ TQRPRGFGF++FD+EDSVD VL+K+FH+LNGK V
Sbjct: 121 LTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQV 180

Query: 181 EVKRALPKDANP--------GSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGF 240
           EVKRALPKDANP        GSGG GG+  YG SG   + ++GR D NRYMQPQ+T  G+
Sbjct: 181 EVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGG--SGYEGRVDSNRYMQPQNTGSGY 240

Query: 241 PPYSGYSVSSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAG-PFGNPSAVNAGYLS 300
           PPY G   S YG G       YG YGS GVG YGG   G+G PAG P+GNPS   AG+ S
Sbjct: 241 PPYGG---SGYGTG-------YG-YGSNGVG-YGG-FGGYGNPAGAPYGNPSVPGAGFGS 300

Query: 301 GAPGGMKSTWTNQAP-GYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGN 360
           G     +S+W  QAP GYG  GY      G AAPW GS  GGP SA  GQ+ + A GYG+
Sbjct: 301 GP----RSSWGAQAPSGYGNVGY------GNAAPWGGS--GGPGSAVMGQAGASA-GYGS 360

Query: 361 QGY-YGGSDGPYG---GYGASGGRATSTPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGN 420
           QGY YGG+D  YG    YGA GGR+ + PN++   G  G    + G G    GYG+  GN
Sbjct: 361 QGYGYGGNDSSYGTPSAYGAVGGRSGNMPNNH---GGGGYADALDGSG----GYGNHQGN 396

Query: 421 SGYSSGGWRSDASQTPGAYGGGYG 431
           +G +              YGGGYG
Sbjct: 421 NGQA-------------GYGGGYG 396

[Close]

BLAST of MS026123.1 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 235.3 bits (599), Expect = 9.0e-62
Identity = 196/469 (41.79%), Postives = 260/469 (55.44%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           M SD GKLFIGGI+WDT+EE+L++YFS FG+VI+AVI++D+TTGR RGFGFVVF+DP+  
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           + V+ +KH IDGR VEAK+A+ R++Q   +RS S +   S GG G  RT+KIFVGGLPS+
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPG--RTRKIFVGGLPSS 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           +TE  F+ YFE +G  TDVV+MYD NTQRPRGFGFIT+D+E++V++VL K+FHELNGK+V
Sbjct: 121 VTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMV 180

Query: 181 EVKRALPKDANPGSGGR--GGYQNYGASGTN--------------VNNFDGRSDGNRYMQ 240
           EVKRA+PK+ +PG      G   +YG +  N              V  +  R DG R+  
Sbjct: 181 EVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDG-RFSP 240

Query: 241 PQSTAGGFPPY-SGYSVS-SYGYGGP---NSGVPYGSYGSYGVGM---YGGASAGFGGPA 300
             +   GF  Y SGY ++ ++  G P     G  Y     YG GM   Y G +  FG   
Sbjct: 241 VGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAV 300

Query: 301 GPFGNPSAVNAGYLSGAPGGMKSTWTNQAPGYGGPGYGASPGFGAAAPWSGSGAGG--PP 360
           G  G     N+ + S      ++ W N     GG  Y  +     +  + G  + G    
Sbjct: 301 GYEGGNGGGNSSFFSSV---TRNLWGNN----GGLNYNNNNTNSNSNTYMGGSSSGNNTL 360

Query: 361 SAPRGQSPS--GASGYGNQGY--------YGGSDGPYGGYGASGGRATSTPNSNVGSGSS 420
           S P G S    GA G GN           YGG+     G G +GG A   P +N  + SS
Sbjct: 361 SGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLG-TGGYAARNPGANKAAPSS 420

Query: 421 --GEPHGMSGGGYMGSGYGDTNGNSG-YSSGGWRSDASQTPGAYGGGYG 431
                   +  GY  +G  +  GN   YS   WRS   +T G     YG
Sbjct: 421 SFSSASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYG 458

[Close]

BLAST of MS026123.1 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 235.3 bits (599), Expect = 9.0e-62
Identity = 196/469 (41.79%), Postives = 260/469 (55.44%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60
           M SD GKLFIGGI+WDT+EE+L++YFS FG+VI+AVI++D+TTGR RGFGFVVF+DP+  
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120
           + V+ +KH IDGR VEAK+A+ R++Q   +RS S +   S GG G  RT+KIFVGGLPS+
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPG--RTRKIFVGGLPSS 120

Query: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180
           +TE  F+ YFE +G  TDVV+MYD NTQRPRGFGFIT+D+E++V++VL K+FHELNGK+V
Sbjct: 121 VTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMV 180

Query: 181 EVKRALPKDANPGSGGR--GGYQNYGASGTN--------------VNNFDGRSDGNRYMQ 240
           EVKRA+PK+ +PG      G   +YG +  N              V  +  R DG R+  
Sbjct: 181 EVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDG-RFSP 240

Query: 241 PQSTAGGFPPY-SGYSVS-SYGYGGP---NSGVPYGSYGSYGVGM---YGGASAGFGGPA 300
             +   GF  Y SGY ++ ++  G P     G  Y     YG GM   Y G +  FG   
Sbjct: 241 VGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAV 300

Query: 301 GPFGNPSAVNAGYLSGAPGGMKSTWTNQAPGYGGPGYGASPGFGAAAPWSGSGAGG--PP 360
           G  G     N+ + S      ++ W N     GG  Y  +     +  + G  + G    
Sbjct: 301 GYEGGNGGGNSSFFSSV---TRNLWGNN----GGLNYNNNNTNSNSNTYMGGSSSGNNTL 360

Query: 361 SAPRGQSPS--GASGYGNQGY--------YGGSDGPYGGYGASGGRATSTPNSNVGSGSS 420
           S P G S    GA G GN           YGG+     G G +GG A   P +N  + SS
Sbjct: 361 SGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLG-TGGYAARNPGANKAAPSS 420

Query: 421 --GEPHGMSGGGYMGSGYGDTNGNSG-YSSGGWRSDASQTPGAYGGGYG 431
                   +  GY  +G  +  GN   YS   WRS   +T G     YG
Sbjct: 421 SFSSASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYG 458

[Close]

BLAST of MS026123.1 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-56
Identity = 193/469 (41.15%), Postives = 259/469 (55.22%), Query Frame = 0


Query: 3   SDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSALDQ 62
           SD GKLFIGGI+WDT EE+L++YF ++GD+++AVIMRD+TTGR RGFGF+VF+DPS  ++
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VLQDKHTIDGRQVEAKRALSREEQQTSSRSGS---FNSGRSSGGSGYFRTKKIFVGGLPS 122
           V+ DKH IDGR VEAK+A+ R++QQ   R  S     S    G  G  RTKKIFVGGLPS
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 ALTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKL 182
           ++TE  F+ YF+ +G + DVV+MYD NTQRPRGFGFITFD+E+SVD VL+K+FHELNGK+
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYS 242
           VEVKRA+PK+ +  +  R     Y   G N      RS  N Y         FPP  GY+
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGY---GNNYGVVPNRSSANSYF------NSFPP--GYN 251

Query: 243 VSSYGYGGPNSGVPYG--SYGSYGVGM---------YGGASAGFG--------GPAGP-- 302
            ++ G  G  S +  G  ++ S+G+G+         + G + G+           A P  
Sbjct: 252 NNNLGSAGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQYFNSASPNR 311

Query: 303 FGNPSAVNAGYLSGAPGGMKSTWTNQAPGYGGPGY--GASPG-----FGAAAPWSGSGAG 362
           + +P   N G  +  P   +  W N++    GPG+  G S G     +G ++  S +   
Sbjct: 312 YNSPIGYNRGDSAYNPSN-RDLWGNRSDS-SGPGWNLGVSVGNNRGNWGLSSVVSDNNGY 371

Query: 363 GPPSAPRGQSPSGASGYGNQGYYGGSDGPYGGYGASGGRATST-PNSNVGSGSSGEPHGM 422
           G  S   G   SG S  GN   + GS G    Y  S   + ST   S     SS E  G+
Sbjct: 372 G-RSYGAGSGLSGLSFAGNTNGFDGSIGEL--YRGSSVYSDSTWQQSMPHHQSSNELDGL 431

Query: 423 SGGGYMGSGYGDTNGNSGYSSGGWRSDASQTPGAYGGGY--GGTQSRHG 438
           S       G+G  N  S  S     ++AS+    Y G Y  G  Q+  G
Sbjct: 432 S----RSYGFGIDNVGSDPS-----ANASE---GYSGNYNVGNRQTHRG 452

The following BLAST results are available for this feature:

BLAST of MS026123.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155643.1	2.3e-240	99.77	heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia] >XP_0221556...	[more]
XP_038887503.1	2.7e-225	94.05	heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida]	[more]
XP_004151998.1	7.3e-223	93.14	heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN58288.1 hypothet...	[more]
XP_022931105.1	3.6e-222	93.14	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata]	[more]
KAG6606360.1	4.7e-222	93.35	Protein NRT1/ PTR FAMILY 5.2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS026123.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	4.5e-106	54.49	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
P51968	4.3e-40	36.23	Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]
Q98SJ2	2.8e-39	36.51	DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1	[more]
P51992	1.4e-38	36.98	Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 P...	[more]
Q96EP5	5.2e-38	36.06	DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1	[more]

BLAST of MS026123.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNH8	1.1e-240	99.77	heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0L8W1	3.5e-223	93.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608180 PE=4 SV=1	[more]
A0A6J1EYJ4	1.8e-222	93.14	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A1S3BHX8	3.9e-222	92.45	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1HIF4	6.7e-222	92.91	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of MS026123.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14300.1	3.2e-107	54.49	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	2.1e-106	56.08	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	9.0e-62	41.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	9.0e-62	41.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	1.1e-56	41.15	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 111..183 e-value: 5.3E-24 score: 95.7 coord: 7..78 e-value: 5.3E-24 score: 95.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..75 e-value: 2.5E-17 score: 62.5 coord: 112..178 e-value: 1.0E-16 score: 60.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 18.171562
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 110..187 score: 18.290949
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 109..191 e-value: 7.3E-26 score: 92.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..108 e-value: 2.7E-27 score: 97.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..437
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..103
None	No IPR available	PANTHER	PTHR48035	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..436
None	No IPR available	PANTHER	PTHR48035:SF1	SUBFAMILY NOT NAMED	coord: 1..436
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 1.36468E-37 score: 129.243
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 108..187 e-value: 6.29467E-45 score: 149.053
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..106
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 109..212

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS026123	MS026123	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS026123.1-cds	MS026123.1-cds-scaffold1150:346388..346609	CDS
MS026123.1-cds	MS026123.1-cds-scaffold1150:347566..348657	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS026123.1	MS026123.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding