Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGCCTCAAACTCGCGAAAATTTGGCCCAAAATCCACTCTCCCGCTCCCCCTTCGCCGCCGATCTGGACACCGGCGACCGTCTCCCGGCACCACCGGCCGTCACCGCCGATTCCGACGACGTAGGCGTCGGAGATCCCGATTTGATTCGAGAACCTAAACGCCGGAAGCACTGCCCGATGGCGCTCGAGAACCTCGACGAGTTGACGTCGGCGTCGAATTCGAGCTTCGGCTTCACCTTCGACACGAAATTCTGCGGGTTCGCGGCGGCCGAGGTCACTCCGAAATTCGGATCGTTCAACTCGATCGCGCCGGAAATCGAGAGGAAGAAGAAAGAACAGAGCTCGGTTCTGGATTCGGCGAGCGAAGTGAGAGGAGACGAAGAAGACAAAGGAGAAGCCGTACAGCAAGAAGAAGATGAAGAGGAAGAAGAAGAAATCGAAGCCGGCGACGCGTTGCGGGAAGCAATTGGAGAAGGAGGAGGAAATCTGGAATCAGTAGCGGAT
mRNA sequence
ATGGCGGAGCCTCAAACTCGCGAAAATTTGGCCCAAAATCCACTCTCCCGCTCCCCCTTCGCCGCCGATCTGGACACCGGCGACCGTCTCCCGGCACCACCGGCCGTCACCGCCGATTCCGACGACGTAGGCGTCGGAGATCCCGATTTGATTCGAGAACCTAAACGCCGGAAGCACTGCCCGATGGCGCTCGAGAACCTCGACGAGTTGACGTCGGCGTCGAATTCGAGCTTCGGCTTCACCTTCGACACGAAATTCTGCGGGTTCGCGGCGGCCGAGGTCACTCCGAAATTCGGATCGTTCAACTCGATCGCGCCGGAAATCGAGAGGAAGAAGAAAGAACAGAGCTCGGTTCTGGATTCGGCGAGCGAAGTGAGAGGAGACGAAGAAGACAAAGGAGAAGCCGTACAGCAAGAAGAAGATGAAGAGGAAGAAGAAGAAATCGAAGCCGGCGACGCGTTGCGGGAAGCAATTGGAGAAGGAGGAGGAAATCTGGAATCAGTAGCGGAT
Coding sequence (CDS)
ATGGCGGAGCCTCAAACTCGCGAAAATTTGGCCCAAAATCCACTCTCCCGCTCCCCCTTCGCCGCCGATCTGGACACCGGCGACCGTCTCCCGGCACCACCGGCCGTCACCGCCGATTCCGACGACGTAGGCGTCGGAGATCCCGATTTGATTCGAGAACCTAAACGCCGGAAGCACTGCCCGATGGCGCTCGAGAACCTCGACGAGTTGACGTCGGCGTCGAATTCGAGCTTCGGCTTCACCTTCGACACGAAATTCTGCGGGTTCGCGGCGGCCGAGGTCACTCCGAAATTCGGATCGTTCAACTCGATCGCGCCGGAAATCGAGAGGAAGAAGAAAGAACAGAGCTCGGTTCTGGATTCGGCGAGCGAAGTGAGAGGAGACGAAGAAGACAAAGGAGAAGCCGTACAGCAAGAAGAAGATGAAGAGGAAGAAGAAGAAATCGAAGCCGGCGACGCGTTGCGGGAAGCAATTGGAGAAGGAGGAGGAAATCTGGAATCAGTAGCGGAT
Protein sequence
MAEPQTRENLAQNPLSRSPFAADLDTGDRLPAPPAVTADSDDVGVGDPDLIREPKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSVLDSASEVRGDEEDKGEAVQQEEDEEEEEEIEAGDALREAIGEGGGNLESVAD
Homology
BLAST of MS017009 vs. NCBI nr
Match:
KAG6595438.1 (hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027436.1 hypothetical protein SDJN02_11449, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 194.5 bits (493), Expect = 7.4e-46
Identity = 126/185 (68.11%), Postives = 139/185 (75.14%), Query Frame = 0
Query: 1 MAEPQTRENLAQNP----LSRSPF-AADLDTGDRLPAPPAV------TADSDDVGVGDPD 60
MAEPQTRE AQNP LSRS F AAD D D APPAV +DS DV + DPD
Sbjct: 1 MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPD 60
Query: 61 LIREPKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIE 120
L+REPKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF +AE+TPKFGSFNSIA E E
Sbjct: 61 LLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGF-SAEITPKFGSFNSIAHETE 120
Query: 121 ---RKKKEQSSVLDSASEVRGD-EEDKGEAVQQEEDEEEEEEIEAGDALREAIGEGGGNL 171
+KKKEQ SVLD AS VRGD EE+K ++VQ+E+D E+EI+ DAL EAIGEG L
Sbjct: 121 TKKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQD---EQEIKVTDALLEAIGEGREGL 180
BLAST of MS017009 vs. NCBI nr
Match:
KAG6604296.1 (hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034454.1 hypothetical protein SDJN02_04183, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 190.7 bits (483), Expect = 1.1e-44
Identity = 129/187 (68.98%), Postives = 145/187 (77.54%), Query Frame = 0
Query: 1 MAEPQTRENLAQN----PLSRSPF-AADLDTGDR--LPAPPAVTADSD--DVGVGDPDLI 60
MAEPQTREN AQN PLSRS F AAD D G+R +P AV+A +D DVG+ DPDLI
Sbjct: 1 MAEPQTRENFAQNPSLSPLSRSSFSAADPDPGERSLVPTTLAVSAAADFSDVGIEDPDLI 60
Query: 61 REPKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIE-- 120
REPKRRKHCP ALENLDELTSASNSSFGFTFDTKFCG +AE+TPKFGSFNSI E+E
Sbjct: 61 REPKRRKHCPSALENLDELTSASNSSFGFTFDTKFCG-VSAEITPKFGSFNSIVSEMEST 120
Query: 121 -RKKKEQSSVLDSASEVRGDEEDKGEAV-----QQEEDEEEEEEIEAGDALREAIGEGGG 171
++KKEQ VLDSAS+ RGDEE + E+V ++EE+EEEEEE E DAL EAI EGGG
Sbjct: 121 KKEKKEQRLVLDSASKTRGDEE-REESVNRGTEEEEEEEEEEEEKEVADALLEAI-EGGG 180
BLAST of MS017009 vs. NCBI nr
Match:
KGN54677.1 (hypothetical protein Csa_012626 [Cucumis sativus])
HSP 1 Score: 159.1 bits (401), Expect = 3.4e-35
Identity = 106/167 (63.47%), Postives = 117/167 (70.06%), Query Frame = 0
Query: 1 MAEPQTRENLAQN----PLSR---SPFAADLDTGDRLPAPPAVTADSDDVGVGDPDLIRE 60
MAEPQTRENLAQN PLSR SP A D D D +PPAV + DPDLIRE
Sbjct: 1 MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVDPPLSPPAVAV------LEDPDLIRE 60
Query: 61 PKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKK 120
PKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF +AE+TPKFGSFNSIAPE+ER +K
Sbjct: 61 PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGF-SAEITPKFGSFNSIAPEMERNQK 120
Query: 121 EQSSVLDSASEVRGDEEDKGEAVQQEEDEEEEEEIEAGDALREAIGE 161
+ + EVR +EE+ V +EEEEEEI DAL EAI E
Sbjct: 121 K------AEREVRVEEEESVHKV----EEEEEEEIGIADALLEAINE 150
BLAST of MS017009 vs. NCBI nr
Match:
KAA0025819.1 (uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09637.1 uncharacterized protein E5676_scaffold447G00340 [Cucumis melo var. makuwa])
HSP 1 Score: 148.7 bits (374), Expect = 4.6e-32
Identity = 91/138 (65.94%), Postives = 101/138 (73.19%), Query Frame = 0
Query: 1 MAEPQTRENLAQN----PLSRSPF---AADLDTGDRLPAPPAVTADSDDVGVGDPDLIRE 60
MAEPQTRENLAQN PLSRS F A D D D +PPAV + DPDLIRE
Sbjct: 1 MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVDPPLSPPAVAP------LQDPDLIRE 60
Query: 61 PKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKK 120
PKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF +AE+TPKFGSFNSIAPE+ER +K
Sbjct: 61 PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGF-SAEITPKFGSFNSIAPEMERNQK 120
Query: 121 EQSSVLDSASEVRGDEED 132
++ EVR +EE+
Sbjct: 121 KEE------REVRVEEEE 125
BLAST of MS017009 vs. NCBI nr
Match:
KAG5583307.1 (hypothetical protein H5410_053934 [Solanum commersonii])
HSP 1 Score: 90.1 bits (222), Expect = 2.0e-14
Identity = 53/134 (39.55%), Postives = 82/134 (61.19%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPLSRSPFAADLDTGDRLPAPPAVTAD--SDDVGVGDPDLIREPKRRK 60
M P++ + A+N P ++ ++GD P+PP TA+ + + DPD++R+PKRRK
Sbjct: 1 MENPKSDQAPAEN--CSDPVPSNSNSGDD-PSPP-TTAEIWEEKPEIEDPDILRQPKRRK 60
Query: 61 HCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSV 120
+CP AL+ D L S SN F F+FD+KF G + EVTPKFGSFN + P + K + +V
Sbjct: 61 NCPSALDKFDSLNSGSNFGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSEETV 120
Query: 121 LDSASEVRGDEEDK 133
L+ E D++++
Sbjct: 121 LEEEDEDDDDDDEE 130
BLAST of MS017009 vs. ExPASy TrEMBL
Match:
A0A0A0L245 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1)
HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35
Identity = 106/167 (63.47%), Postives = 117/167 (70.06%), Query Frame = 0
Query: 1 MAEPQTRENLAQN----PLSR---SPFAADLDTGDRLPAPPAVTADSDDVGVGDPDLIRE 60
MAEPQTRENLAQN PLSR SP A D D D +PPAV + DPDLIRE
Sbjct: 1 MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVDPPLSPPAVAV------LEDPDLIRE 60
Query: 61 PKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKK 120
PKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF +AE+TPKFGSFNSIAPE+ER +K
Sbjct: 61 PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGF-SAEITPKFGSFNSIAPEMERNQK 120
Query: 121 EQSSVLDSASEVRGDEEDKGEAVQQEEDEEEEEEIEAGDALREAIGE 161
+ + EVR +EE+ V +EEEEEEI DAL EAI E
Sbjct: 121 K------AEREVRVEEEESVHKV----EEEEEEEIGIADALLEAINE 150
BLAST of MS017009 vs. ExPASy TrEMBL
Match:
A0A5D3CCB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00340 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 2.2e-32
Identity = 91/138 (65.94%), Postives = 101/138 (73.19%), Query Frame = 0
Query: 1 MAEPQTRENLAQN----PLSRSPF---AADLDTGDRLPAPPAVTADSDDVGVGDPDLIRE 60
MAEPQTRENLAQN PLSRS F A D D D +PPAV + DPDLIRE
Sbjct: 1 MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVDPPLSPPAVAP------LQDPDLIRE 60
Query: 61 PKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKK 120
PKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF +AE+TPKFGSFNSIAPE+ER +K
Sbjct: 61 PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGF-SAEITPKFGSFNSIAPEMERNQK 120
Query: 121 EQSSVLDSASEVRGDEED 132
++ EVR +EE+
Sbjct: 121 KEE------REVRVEEEE 125
BLAST of MS017009 vs. ExPASy TrEMBL
Match:
A0A0V0HAK9 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 6.2e-14
Identity = 55/143 (38.46%), Postives = 87/143 (60.84%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPLSRSPFAADLDTGDRLPAPPAVTADS--DDVGVGDPDLIREPKRRK 60
M P++ + A+N P ++ ++GD P+PP TA+S + + DPD++R+PKRRK
Sbjct: 1 MENPKSDQAPAEN--CSDPAPSNSNSGDD-PSPP-TTAESWEEKPEIEDPDILRQPKRRK 60
Query: 61 HCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSV 120
+CP AL+ D + S SN F F+FD+KF G + EVTPKFGSFN + P + K + +V
Sbjct: 61 NCPSALDKFDSVNSGSNFGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSEETV 120
Query: 121 LDSASEVRGDEEDKGEAVQQEED 142
L+ E D++++ V E++
Sbjct: 121 LEEEDEDDDDDDEEKPDVVVEKN 139
BLAST of MS017009 vs. ExPASy TrEMBL
Match:
A0A3Q7JFM8 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101250353 PE=4 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 1.0e-13
Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 0
Query: 19 PFAADLDTGDRLPAPPAVTADS--DDVGVGDPDLIREPKRRKHCPMALENLDELTSASNS 78
P ++ ++GD P+PP TA+S + + DPD+IR+ KRRK+CP AL+ D + S SN
Sbjct: 17 PAPSNSNSGDD-PSPP-TTAESWEEKPEIEDPDIIRQAKRRKNCPSALDKFDSVNSGSNF 76
Query: 79 SFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSVLDSASEVRGDEEDKGEAV 138
F F+FD+KF G + EVTPKFGSFN + P + K + +VL+ E DEE+K + V
Sbjct: 77 GFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSEETVLEVEDE---DEEEKPDVV 134
Query: 139 QQE 140
++
Sbjct: 137 VEK 134
BLAST of MS017009 vs. ExPASy TrEMBL
Match:
A0A6N2B8K2 (Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_018659 PE=4 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 3.1e-13
Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 0
Query: 19 PFAADLDTGDRLPAPPAVTADS--DDVGVGDPDLIREPKRRKHCPMALENLDELTSASNS 78
P ++ ++GD P+PP TA+S + + DPD+IR+ KRRK+CP AL+ D + S SN
Sbjct: 17 PAPSNSNSGDD-PSPP-TTAESWEEKPEIEDPDIIRQAKRRKNCPSALDKFDCVNSGSNF 76
Query: 79 SFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSVLDSASEVRGDEEDKGEAV 138
F F+FD+KF G + EVTPKFGSFN + P + K + +VL+ E DEE+K + V
Sbjct: 77 GFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSEETVLEVEDE---DEEEKPDVV 134
Query: 139 QQE 140
++
Sbjct: 137 VEK 134
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6595438.1 | 7.4e-46 | 68.11 | hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6604296.1 | 1.1e-44 | 68.98 | hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KGN54677.1 | 3.4e-35 | 63.47 | hypothetical protein Csa_012626 [Cucumis sativus] | [more] |
| KAA0025819.1 | 4.6e-32 | 65.94 | uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09... | [more] |
| KAG5583307.1 | 2.0e-14 | 39.55 | hypothetical protein H5410_053934 [Solanum commersonii] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L245 | 1.7e-35 | 63.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1 | [more] |
| A0A5D3CCB2 | 2.2e-32 | 65.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0V0HAK9 | 6.2e-14 | 38.46 | Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1 | [more] |
| A0A3Q7JFM8 | 1.0e-13 | 43.09 | Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101250353 PE=4 SV=1 | [more] |
| A0A6N2B8K2 | 3.1e-13 | 43.09 | Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_018659 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
