Homology
BLAST of MS012288 vs. NCBI nr
Match:
XP_022159516.1 (RGG repeats nuclear RNA binding protein A-like [Momordica charantia])
HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK
Sbjct: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
Query: 121 RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD 180
RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD
Sbjct: 121 RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD 180
Query: 181 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 240
EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 240
Query: 241 ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV 300
ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV
Sbjct: 241 ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV 300
Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK 360
TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK 359
BLAST of MS012288 vs. NCBI nr
Match:
XP_022931786.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata])
HSP 1 Score: 563.9 bits (1452), Expect = 9.8e-157
Identity = 324/366 (88.52%), Postives = 339/366 (92.62%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+ GGKNGFSDRY PE+GEK E
Sbjct: 61 RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120
Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
+RGYGGPRGSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180
Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
DEIAPDVEEPVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDSVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240
Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD ADKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKK 300
Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV----SAPSIEDPGQFP 360
SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV +APSIED GQFP
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFP 360
BLAST of MS012288 vs. NCBI nr
Match:
KAG6571794.1 (RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 563.5 bits (1451), Expect = 1.3e-156
Identity = 324/367 (88.28%), Postives = 339/367 (92.37%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+ GGKNGFSDRY PE+GEK E
Sbjct: 61 RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120
Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
+RGYGGPRGSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180
Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
DEIAPDVEEPVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDSVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240
Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD ADKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKK 300
Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV-----SAPSIEDPGQF 360
SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV +APSIED GQF
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAAPSIEDQGQF 360
BLAST of MS012288 vs. NCBI nr
Match:
XP_023554179.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 560.5 bits (1443), Expect = 1.1e-155
Identity = 322/366 (87.98%), Postives = 338/366 (92.35%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAP+LAQPAKP A LPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPSLAQPAKP-ANLPSKPLPPAQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+ GGKNGFSDRY PE+GEK E
Sbjct: 61 RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120
Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
+RGYGGPRGSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180
Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
DEIAPDVEEPVAENEKNVAPEQQLGED V+D NKE+AAKE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDGAVDDNNKEEAAKEAEEKEPEDKEMTLKEYEKL 240
Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD ADKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKK 300
Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV----SAPSIEDPGQFP 360
SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNR+ V +APSIED GQFP
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMTVAAAAAAPSIEDQGQFP 360
BLAST of MS012288 vs. NCBI nr
Match:
XP_022971841.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima])
HSP 1 Score: 556.6 bits (1433), Expect = 1.6e-154
Identity = 320/365 (87.67%), Postives = 335/365 (91.78%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+ GGKNGFSDRY PE+GEK E
Sbjct: 61 RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120
Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
+RGYGGPRGSFRGPRRGGFSNGE EE E PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEAEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180
Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
DEIAPDVE PVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEAPVAENEKNVAPEQQLGEDGVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240
Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD DKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIVDKEEKAKK 300
Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV---SAPSIEDPGQFPS 360
SVTITEFLKP EGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV +APSIED GQFPS
Sbjct: 301 SVTITEFLKPTEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAPSIEDQGQFPS 360
BLAST of MS012288 vs. ExPASy Swiss-Prot
Match:
O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)
HSP 1 Score: 280.4 bits (716), Expect = 2.8e-74
Identity = 218/378 (57.67%), Postives = 252/378 (66.67%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQ-PAKPAAKLPSKPLPPAQA 60
MAT+NPFDLL DDD EDP+QLA A SKK+ ++ PAK A KLPSKPLPPAQA
Sbjct: 1 MATLNPFDLL-DDDAEDPSQLAVAIEKIDK--SKKSGQVSSLPAKSAPKLPSKPLPPAQA 60
Query: 61 VREARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPE-EGEKG 120
VREAR++ RG GG GF RGR GG+NRD G NG+S Y P EG+
Sbjct: 61 VREARSDAPRGGGGRGGFNRGR---GGYNRDD---------GNNGYSGGYTKPSGEGDVS 120
Query: 121 ----EKRGYGG-PRGSFRGP-------RRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFK 180
E+RG GG PRGSFRG RRGGFSN E +GE PRR F+RRSGTGRG++FK
Sbjct: 121 KSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFK 180
Query: 181 RDGGGRRNWGAPGDEIAPDVEEPV-AENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEP 240
RDG GR NWG PG+EIA + E E EK+V E+ +DV D NKED EEKEP
Sbjct: 181 RDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEP 240
Query: 241 EDKEMTLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSNDEIFAKLGGDKD 300
EDKEMTL EYEK+ EE +K L + +VD ++ E+MQQLS KKSNDEIF KLG DKD
Sbjct: 241 EDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD 300
Query: 301 KRKDNADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGG-SRGGFNNGSN--RIN 360
KRKD DKEEKAKK+V+I EFLKPAEG YY GGRG GRGRGG RGG ++G + N
Sbjct: 301 KRKD--DKEEKAKKAVSINEFLKPAEGGNYYR-GGRG-GRGRGGRGRGGVSSGESGGYRN 355
BLAST of MS012288 vs. ExPASy Swiss-Prot
Match:
Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 6.5e-71
Identity = 182/302 (60.26%), Postives = 216/302 (71.52%), Query Frame = 0
Query: 70 GRGGGRGFGRGR--GGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGE----KRGY 129
GRGG RG GRGR G G GFN++SA++E NA G NGFS RY E+GE G+ + GY
Sbjct: 4 GRGGPRGGGRGRGPGRGRGFNQESADDE-NAFGSNNGFSGRYRVQEDGESGKLSERRGGY 63
Query: 130 GGPRGSFRGPRRGGFSNGEAE--EGEHPRRMFDRRSGTGRGNEF-KRDGGGRRNWGAPGD 189
GGPRG F G RRGGF+NG+A EGE PRR+FDRRSGTGRGNE+ KR+G GR NWG P D
Sbjct: 64 GGPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPAD 123
Query: 190 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 249
+IA + E PV + EK V E++ G++ D NK+ A EPEEKEPE+KEMTL+EYEKL E
Sbjct: 124 DIAQETEVPVNDGEKIVEAEKEAGQEEAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLME 183
Query: 250 ENRK--LLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 309
E RK L K E RK +D+ELE+MQ LS KK++DEIF KLG +K+KRK+ EKA+K
Sbjct: 184 EKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAV---EKARK 243
Query: 310 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNG-SNRINVSAPSIEDPGQFPSLS 360
+ +I EFLKPAEGE Y GGRGRG GRG RGGF G + SAPSIED GQFPSL
Sbjct: 244 TQSINEFLKPAEGENYSRRGGRGRGPGRG--RGGFGGGVGGNKSFSAPSIEDVGQFPSLV 299
BLAST of MS012288 vs. ExPASy Swiss-Prot
Match:
Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)
HSP 1 Score: 248.4 bits (633), Expect = 1.2e-64
Identity = 195/368 (52.99%), Postives = 236/368 (64.13%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MA++NPFDLL DD EDP+QLA A S +KA A QP K AAK P+KP PP+QAV
Sbjct: 1 MASLNPFDLL-GDDAEDPSQLAVAL----SQKVEKAAAAVQPPK-AAKFPTKPAPPSQAV 60
Query: 61 REARNENSRGRG--GGR-GFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK 120
RE+RN GRG GGR GF RGR G GG+NRD+ NN+ APG +NGFS Y P E
Sbjct: 61 RESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNND--APGNENGFSGGYRRPSEDAD 120
Query: 121 GEKRG--YGGPR--GSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRR 180
G RG GG R G GPRRGG +NGE+ + E P R +DR S TG G KR+GGGR
Sbjct: 121 GASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRG 180
Query: 181 NWGAPGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPED---KEM 240
NWG D+I P EEP E EK+ E+Q GED + KE A+E +KE E+ +EM
Sbjct: 181 NWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREM 240
Query: 241 TLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSND-EIFAKLGGDKDKRKD 300
TL+EYEK+ EE +K L T+V + +VD ++ E+MQQLS KK+ D EIF KLG DK+KRK
Sbjct: 241 TLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK- 300
Query: 301 NADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIE 357
D EKAKKS++I EFLKPA+G+RY GG RGRG G RG N +AP+I
Sbjct: 301 --DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIG 356
BLAST of MS012288 vs. ExPASy Swiss-Prot
Match:
O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 4.0e-60
Identity = 184/375 (49.07%), Postives = 231/375 (61.60%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MA++NPFDLL DDD EDP+Q+ +++ K A Q AK + K+P+KP PP+QAV
Sbjct: 1 MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTAK-SGKMPTKPPPPSQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
REARN GRG GRG GRGG GG NRDS NN+ P +NG+ Y EEG+ G +
Sbjct: 61 REARNAPGGGRGAGRGGSYGRGGRGGNNRDSRNND--GPANENGYGGGYRRSEEGD-GAR 120
Query: 121 RGYGGPRGSFRGPRRGGFSN-GEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
R GGP G +RG RRG +SN G++ + E PR+ +DR S T GNE KRDG GR NWG
Sbjct: 121 R--GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQ 180
Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLR 240
D+I P EE A +KN+ E+Q GE D E A++ EEK PEDKEMTL+EYEK+
Sbjct: 181 DDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEEK-PEDKEMTLEEYEKVL 240
Query: 241 EENRKLLAKTEVRKAEVD-EELENMQQLSCKKS-NDEIFAKLGGDKDKRKDNADKEEKAK 300
EE +K L T+V + +VD + E MQQLS KKS NDE+F KLG +KDKR ++EEK +
Sbjct: 241 EEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKTR 300
Query: 301 KSVTITEFLKPAEGERYYNP-----GGR-GRGRGRGGSRGGFNN----------GSNRIN 357
KS++I EFLKPA+G+ YY P GGR GRG G R G N G
Sbjct: 301 KSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQ 358
BLAST of MS012288 vs. ExPASy TrEMBL
Match:
A0A6J1E459 (RGG repeats nuclear RNA binding protein A-like OS=Momordica charantia OX=3673 GN=LOC111025910 PE=4 SV=1)
HSP 1 Score: 664.1 bits (1712), Expect = 3.4e-187
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK
Sbjct: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
Query: 121 RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD 180
RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD
Sbjct: 121 RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD 180
Query: 181 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 240
EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 240
Query: 241 ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV 300
ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV
Sbjct: 241 ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV 300
Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK 360
TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK 359
BLAST of MS012288 vs. ExPASy TrEMBL
Match:
A0A6J1EUM3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111438060 PE=4 SV=1)
HSP 1 Score: 563.9 bits (1452), Expect = 4.7e-157
Identity = 324/366 (88.52%), Postives = 339/366 (92.62%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+ GGKNGFSDRY PE+GEK E
Sbjct: 61 RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120
Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
+RGYGGPRGSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180
Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
DEIAPDVEEPVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDSVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240
Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD ADKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKK 300
Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV----SAPSIEDPGQFP 360
SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV +APSIED GQFP
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFP 360
BLAST of MS012288 vs. ExPASy TrEMBL
Match:
A0A6J1I4B3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111470534 PE=4 SV=1)
HSP 1 Score: 556.6 bits (1433), Expect = 7.6e-155
Identity = 320/365 (87.67%), Postives = 335/365 (91.78%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+ GGKNGFSDRY PE+GEK E
Sbjct: 61 RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120
Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
+RGYGGPRGSFRGPRRGGFSNGE EE E PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEAEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180
Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
DEIAPDVE PVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEAPVAENEKNVAPEQQLGEDGVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240
Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD DKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIVDKEEKAKK 300
Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV---SAPSIEDPGQFPS 360
SVTITEFLKP EGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV +APSIED GQFPS
Sbjct: 301 SVTITEFLKPTEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAPSIEDQGQFPS 360
BLAST of MS012288 vs. ExPASy TrEMBL
Match:
A0A1S3CPW2 (plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103503456 PE=4 SV=1)
HSP 1 Score: 556.6 bits (1433), Expect = 7.6e-155
Identity = 321/363 (88.43%), Postives = 339/363 (93.39%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQLASAQRSAP+ PSKKAPA AQPAKP AKLPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKP-AKLPSKPLPPAQAV 60
Query: 61 REARNENSR-GRGGGRGFGRGR-GGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK- 120
RE++NENSR GRGGGRGFGRGR GGGGGFNRDSANNE++ G+NGFSDRY PE+GEK
Sbjct: 61 RESKNENSRGGRGGGRGFGRGRGGGGGGFNRDSANNENS---GRNGFSDRYQTPEDGEKA 120
Query: 121 GEKRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGA 180
E+RGYG PRGSFRGPRRGGFSNGEAEEGE PRR+++RRSGTGRGNEFKRDG GRRNWGA
Sbjct: 121 AERRGYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGA 180
Query: 181 PGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENK-EDAAKEPEEKEPEDKEMTLKEYE 240
PGDE APDVEEPVAENEKNVAPEQQLGED V+D NK E+A KEPEEKEPEDKEMTLKEYE
Sbjct: 181 PGDENAPDVEEPVAENEKNVAPEQQLGEDGVDDNNKAEEAVKEPEEKEPEDKEMTLKEYE 240
Query: 241 KLREENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKA 300
KLREE+RKLLAKTEVRKAEVDEELENMQQLS KK+NDEIFAKLG DKDKRKD ADKEE+A
Sbjct: 241 KLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEERA 300
Query: 301 KKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSL 360
KKSVTITEFLKPAEGERYYNPGGRGRGRGR GSRGGFNNGSNR+NV+APSIEDPGQFPSL
Sbjct: 301 KKSVTITEFLKPAEGERYYNPGGRGRGRGR-GSRGGFNNGSNRMNVAAPSIEDPGQFPSL 358
BLAST of MS012288 vs. ExPASy TrEMBL
Match:
A0A0A0LKF6 (HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914560 PE=4 SV=1)
HSP 1 Score: 551.6 bits (1420), Expect = 2.4e-153
Identity = 318/363 (87.60%), Postives = 336/363 (92.56%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MATMNPFDLLVDDDNEDPNQLASA RSAP PSKKAPA AQPAKP AKLPSKPLPPAQAV
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAPAQPAKP-AKLPSKPLPPAQAV 60
Query: 61 REARNENSR-GRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK-G 120
RE++N+N R GRGGGRGFGRGRGGGGGFNRDSANNE+ GG+NGFSDRY PE+GEK
Sbjct: 61 RESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNEN---GGRNGFSDRYQTPEDGEKAA 120
Query: 121 EKRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAP 180
E+RGYG PRGSFRGPRR GFSNGEAEEGE PRR+++RRSGTGRGNEFKR+G GRRNWGAP
Sbjct: 121 ERRGYGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAP 180
Query: 181 GDEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENK-EDAAKEPEEKEPEDKEMTLKEYE 240
GDE APDVEEPVAENEKNVAPEQQLGED VV+D NK E+A KEPEEKEPEDKEMTLKEYE
Sbjct: 181 GDENAPDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYE 240
Query: 241 KLREENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKA 300
KLREE+RKLLAKTEVRKAEVDEELENMQQLS KK+NDEIFAKLG DKDKRKD ADKEE+A
Sbjct: 241 KLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERA 300
Query: 301 KKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSL 360
KKSVTITEFLKPAEGERYYNPGGRGRGRGR GSRGGFNNGSNR+NV+APSIEDPGQFPSL
Sbjct: 301 KKSVTITEFLKPAEGERYYNPGGRGRGRGR-GSRGGFNNGSNRMNVAAPSIEDPGQFPSL 358
BLAST of MS012288 vs. TAIR 10
Match:
AT4G16830.1 (Hyaluronan / mRNA binding family )
HSP 1 Score: 280.4 bits (716), Expect = 2.0e-75
Identity = 218/378 (57.67%), Postives = 252/378 (66.67%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQ-PAKPAAKLPSKPLPPAQA 60
MAT+NPFDLL DDD EDP+QLA A SKK+ ++ PAK A KLPSKPLPPAQA
Sbjct: 1 MATLNPFDLL-DDDAEDPSQLAVAIEKIDK--SKKSGQVSSLPAKSAPKLPSKPLPPAQA 60
Query: 61 VREARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPE-EGEKG 120
VREAR++ RG GG GF RGR GG+NRD G NG+S Y P EG+
Sbjct: 61 VREARSDAPRGGGGRGGFNRGR---GGYNRDD---------GNNGYSGGYTKPSGEGDVS 120
Query: 121 ----EKRGYGG-PRGSFRGP-------RRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFK 180
E+RG GG PRGSFRG RRGGFSN E +GE PRR F+RRSGTGRG++FK
Sbjct: 121 KSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFK 180
Query: 181 RDGGGRRNWGAPGDEIAPDVEEPV-AENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEP 240
RDG GR NWG PG+EIA + E E EK+V E+ +DV D NKED EEKEP
Sbjct: 181 RDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEP 240
Query: 241 EDKEMTLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSNDEIFAKLGGDKD 300
EDKEMTL EYEK+ EE +K L + +VD ++ E+MQQLS KKSNDEIF KLG DKD
Sbjct: 241 EDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD 300
Query: 301 KRKDNADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGG-SRGGFNNGSN--RIN 360
KRKD DKEEKAKK+V+I EFLKPAEG YY GGRG GRGRGG RGG ++G + N
Sbjct: 301 KRKD--DKEEKAKKAVSINEFLKPAEGGNYYR-GGRG-GRGRGGRGRGGVSSGESGGYRN 355
BLAST of MS012288 vs. TAIR 10
Match:
AT5G47210.1 (Hyaluronan / mRNA binding family )
HSP 1 Score: 248.4 bits (633), Expect = 8.5e-66
Identity = 195/368 (52.99%), Postives = 236/368 (64.13%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MA++NPFDLL DD EDP+QLA A S +KA A QP K AAK P+KP PP+QAV
Sbjct: 1 MASLNPFDLL-GDDAEDPSQLAVAL----SQKVEKAAAAVQPPK-AAKFPTKPAPPSQAV 60
Query: 61 REARNENSRGRG--GGR-GFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK 120
RE+RN GRG GGR GF RGR G GG+NRD+ NN+ APG +NGFS Y P E
Sbjct: 61 RESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNND--APGNENGFSGGYRRPSEDAD 120
Query: 121 GEKRG--YGGPR--GSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRR 180
G RG GG R G GPRRGG +NGE+ + E P R +DR S TG G KR+GGGR
Sbjct: 121 GASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRG 180
Query: 181 NWGAPGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPED---KEM 240
NWG D+I P EEP E EK+ E+Q GED + KE A+E +KE E+ +EM
Sbjct: 181 NWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREM 240
Query: 241 TLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSND-EIFAKLGGDKDKRKD 300
TL+EYEK+ EE +K L T+V + +VD ++ E+MQQLS KK+ D EIF KLG DK+KRK
Sbjct: 241 TLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK- 300
Query: 301 NADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIE 357
D EKAKKS++I EFLKPA+G+RY GG RGRG G RG N +AP+I
Sbjct: 301 --DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIG 356
BLAST of MS012288 vs. TAIR 10
Match:
AT4G17520.1 (Hyaluronan / mRNA binding family )
HSP 1 Score: 233.4 bits (594), Expect = 2.8e-61
Identity = 184/375 (49.07%), Postives = 231/375 (61.60%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MA++NPFDLL DDD EDP+Q+ +++ K A Q AK + K+P+KP PP+QAV
Sbjct: 1 MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTAK-SGKMPTKPPPPSQAV 60
Query: 61 REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
REARN GRG GRG GRGG GG NRDS NN+ P +NG+ Y EEG+ G +
Sbjct: 61 REARNAPGGGRGAGRGGSYGRGGRGGNNRDSRNND--GPANENGYGGGYRRSEEGD-GAR 120
Query: 121 RGYGGPRGSFRGPRRGGFSN-GEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
R GGP G +RG RRG +SN G++ + E PR+ +DR S T GNE KRDG GR NWG
Sbjct: 121 R--GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQ 180
Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLR 240
D+I P EE A +KN+ E+Q GE D E A++ EEK PEDKEMTL+EYEK+
Sbjct: 181 DDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEEK-PEDKEMTLEEYEKVL 240
Query: 241 EENRKLLAKTEVRKAEVD-EELENMQQLSCKKS-NDEIFAKLGGDKDKRKDNADKEEKAK 300
EE +K L T+V + +VD + E MQQLS KKS NDE+F KLG +KDKR ++EEK +
Sbjct: 241 EEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKTR 300
Query: 301 KSVTITEFLKPAEGERYYNP-----GGR-GRGRGRGGSRGGFNN----------GSNRIN 357
KS++I EFLKPA+G+ YY P GGR GRG G R G N G
Sbjct: 301 KSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQ 358
BLAST of MS012288 vs. TAIR 10
Match:
AT4G16830.3 (Hyaluronan / mRNA binding family )
HSP 1 Score: 231.9 bits (590), Expect = 8.2e-61
Identity = 180/318 (56.60%), Postives = 209/318 (65.72%), Query Frame = 0
Query: 60 VREARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPE-EGEKG 119
VREAR++ RG GG GF RGR GG+NRD G NG+S Y P EG+
Sbjct: 48 VREARSDAPRGGGGRGGFNRGR---GGYNRDD---------GNNGYSGGYTKPSGEGDVS 107
Query: 120 ----EKRGYGG-PRGSFRGP-------RRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFK 179
E+RG GG PRGSFRG RRGGFSN E +GE PRR F+RRSGTGRG++FK
Sbjct: 108 KSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFK 167
Query: 180 RDGGGRRNWGAPGDEIAPDVEEPV-AENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEP 239
RDG GR NWG PG+EIA + E E EK+V E+ +DV D NKED EEKEP
Sbjct: 168 RDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEP 227
Query: 240 EDKEMTLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSNDEIFAKLGGDKD 299
EDKEMTL EYEK+ EE +K L + +VD ++ E+MQQLS KKSNDEIF KLG DKD
Sbjct: 228 EDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD 287
Query: 300 KRKDNADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGG-SRGGFNNGSN--RIN 359
KRKD DKEEKAKK+V+I EFLKPAEG YY GGRG GRGRGG RGG ++G + N
Sbjct: 288 KRKD--DKEEKAKKAVSINEFLKPAEGGNYYR-GGRG-GRGRGGRGRGGVSSGESGGYRN 345
BLAST of MS012288 vs. TAIR 10
Match:
AT5G47210.3 (Hyaluronan / mRNA binding family )
HSP 1 Score: 202.6 bits (514), Expect = 5.3e-52
Identity = 162/307 (52.77%), Postives = 199/307 (64.82%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
MA++NPFDLL DD EDP+QLA A S +KA A QP K AAK P+KP PP+QAV
Sbjct: 1 MASLNPFDLL-GDDAEDPSQLAVAL----SQKVEKAAAAVQPPK-AAKFPTKPAPPSQAV 60
Query: 61 REARNENSRGRG--GGR-GFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK 120
RE+RN GRG GGR GF RGR G GG+NRD+ NN+ APG +NGFS Y P E
Sbjct: 61 RESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNND--APGNENGFSGGYRRPSEDAD 120
Query: 121 GEKRG--YGGPR--GSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRR 180
G RG GG R G GPRRGG +NGE+ + E P R +DR S TG G KR+GGGR
Sbjct: 121 GASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRG 180
Query: 181 NWGAPGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPED---KEM 240
NWG D+I P EEP E EK+ E+Q GED + KE A+E +KE E+ +EM
Sbjct: 181 NWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREM 240
Query: 241 TLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSND-EIFAKLGGDKDKRKD 296
TL+EYEK+ EE +K L T+V + +VD ++ E+MQQLS KK+ D EIF KLG DK+KRKD
Sbjct: 241 TLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKD 298
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022159516.1 | 6.9e-187 | 100.00 | RGG repeats nuclear RNA binding protein A-like [Momordica charantia] | [more] |
| XP_022931786.1 | 9.8e-157 | 88.52 | RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata] | [more] |
| KAG6571794.1 | 1.3e-156 | 88.28 | RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp... | [more] |
| XP_023554179.1 | 1.1e-155 | 87.98 | RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_022971841.1 | 1.6e-154 | 87.67 | RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| O23523 | 2.8e-74 | 57.67 | RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG... | [more] |
| Q9SQ56 | 6.5e-71 | 60.26 | RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409... | [more] |
| Q9LVT8 | 1.2e-64 | 52.99 | RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG... | [more] |
| O23593 | 4.0e-60 | 49.07 | RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1E459 | 3.4e-187 | 100.00 | RGG repeats nuclear RNA binding protein A-like OS=Momordica charantia OX=3673 GN... | [more] |
| A0A6J1EUM3 | 4.7e-157 | 88.52 | RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=... | [more] |
| A0A6J1I4B3 | 7.6e-155 | 87.67 | RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
| A0A1S3CPW2 | 7.6e-155 | 88.43 | plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=36... | [more] |
| A0A0A0LKF6 | 2.4e-153 | 87.60 | HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914... | [more] |
