MS012288 (gene) Bitter gourd (TR) v1

Overview
NameMS012288
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRGG repeats nuclear RNA binding protein A-like
Locationscaffold797: 1223138 .. 1225562 (-)
RNA-Seq ExpressionMS012288
SyntenyMS012288
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTATGAACCCTTTTGATCTCTTGGTCGACGACGACAACGAGGACCCTAATCAGCTCGCTTCTGCTCAGCGGTCTGCGCCGTCGCCGCCGTCTAAGAAAGCCCCTGCTCTGGCTCAGCCCGCCAAACCGGCGGCTAAGCTTCCTTCCAAGCCGCTTCCTCCGGCTCAGGCTGGTGGGTTTTGTTACTTGATTTATACTTTTGTTTTTCATATTTTATGATTCGTTTTCCCTGTGAAGTAGTAAGAAACGCTGAGCGTTTCAATCAATCTGTATATGAATTTTCTGTCCTTATGATGTTTGCCTTTTTTGGTTTTTGTTTTGCTTTGTTGTTATTACTCTAGATGTTGGGTTTGTTTTGCAATGTCTTAATAATGTTTGAAAGGATGTATTGTGAAGTTTCCTCTGTAGTTCTTTTGTTTGTTATTTATTCTTCTTGAATGGAACTGGTTTCCTATGTATTGCAAAGCTGACTCTTGTCTAGAGGTTGGAGGTTAAGTCACCCATCCCCATATTTGTTGTTTGGTGTACTCGAAAAGGAAAAATAAGAATACGTACCCCTAAAGTGGTATTCATACAAGAAGTTAATATTGCAGTTTCTCAATTAGTGAGAAGTTTATAATTATGGTGTTAGCTGATGAAGTAGGAACTACACGAATGTTATCTTGTTGAACTTTTTTCTCCAATGTAATGTAGTTTTGGGCATTATTTCTGTTTTAATTTTATATATGATCAGTGAGGGAGGCAAGGAACGAAAATAGCCGTGGTCGCGGAGGTGGACGTGGATTTGGACGAGGACGTGGTGGCGGTGGTGGATTTAATAGGGACTCAGCGAATAATGAAAGCAATGCACCAGGTGGCAAGAACGGATTCTCTGATCGTTATCTGCCTCCTGAGGAAGGTGAAAAGGGTGAAAAGCGTGGGTATGGTGGTCCTCGTGGCTCTTTCCGAGGTCCTCGTCGTGGTGGCTTCAGCAATGGGGAAGCAGAAGAAGGGGAACATCCCCGAAGAATGTTTGATCGTCGCAGTGGAACTGGACGTGGGTTAGTTATTCTTTATTTATATAACTAGTTTCCAGTTTGATCATCTGCCTGGCAATTTGTTTTTGTATTTTATCTTACATTGTGGTTGTTTTAATTGTTTTAGAAATGAGTTTAAGCGGGATGGGGGTGGTCGTAGGAACTGGGGAGCTCCTGGTGATGAAATTGCCCCGTAAGTTTTAATTTTCCACTTGCAACATGTTTCTTGATTTGTTGGAATTGTACTATTTGAACTCATACAGGGTCTTCAATTCCTGTTAAGCTCACCACCACCTCTTATTTACTTGACTTGTGAATCTTAAGGGATGTGGAAGAGCCTGTTGCTGAAAATGAGAAGAATGTTGCTCCGGAGCAACAATTGGGAGAGGATGTGGTGAATGATGAGAACAAAGAGGATGCTGCAAAGGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGTAAGTGTTCTTATTTGCAGTATCGATACATTGATTAGTCTATTCTTATAAAAGAAGATACATTGTATTGGTTAACCTATCATATCAACTGGCTATATAATCTCAAATCTGTTCCACTGTCATCTTACAGGAGATGACCCTCAAAGAGTATGAAAAGCTCCGTGAAGAGAACAGGAAACTTTTGGCAAAGACTGAGGTGAGGAAGGCTGAGGTGGATGAGGAGTTAGAGAACATGCAGCAGCTTTCTTGCAAGAAAAGCAATGATGAAATATTTGCCAAATTGGTGAGTGTTTCTATCATGTTACTTCAACGATTCTTTTTTTGTGTTTTTCTTTGGTAGTCCGACCTTAAAAATTTTATTGTCAGGGTGGTGATAAGGATAAGCGCAAAGATAATGCTGACAAGGAAGAGAAAGCTAAGAAAGTATGTATTACTTTTCAGGAACTCATTATTCTGTGGTCTTTATGAAATTATATATTATGAATTAACCAGAAATATTATTTTTTTTGTTGGTATGCAACTTTGAAAGTGTTGATTCAATCCATCTCTCTTTCACCTGTTGGTTCTTGATGTACTTTGCGGCGTCGAGTTATTTTCAGTTTTCTTATATAGTATATATAAGTACCCAGTCTGTTATTTGTAAGATGTTTCTACCATTGCTGTATTTTAATATCAGGTCCATTTTTGCGAAATATCTTCCACCCACATTCTTTCTACACTTCCTTTTATATAGCTGATCTAATTTATTTGTTTTTGGCTATAGTCTGTGACCATAACTGAGTTCCTAAAGCCTGCTGAGGGTGAGAGGTACTATAACCCTGGCGGTCGTGGTAGAGGCCGTGGGCGAGGAGGCTCAAGAGGTGGCTTCAACAATGGTAGCAACAGAATCAATGTCTCAGCCCCCTCCATTGAAGATCCCGGGCAGTTCCCTTCATTGAGTGCTAAG

mRNA sequence

ATGGCAACTATGAACCCTTTTGATCTCTTGGTCGACGACGACAACGAGGACCCTAATCAGCTCGCTTCTGCTCAGCGGTCTGCGCCGTCGCCGCCGTCTAAGAAAGCCCCTGCTCTGGCTCAGCCCGCCAAACCGGCGGCTAAGCTTCCTTCCAAGCCGCTTCCTCCGGCTCAGGCTGTGAGGGAGGCAAGGAACGAAAATAGCCGTGGTCGCGGAGGTGGACGTGGATTTGGACGAGGACGTGGTGGCGGTGGTGGATTTAATAGGGACTCAGCGAATAATGAAAGCAATGCACCAGGTGGCAAGAACGGATTCTCTGATCGTTATCTGCCTCCTGAGGAAGGTGAAAAGGGTGAAAAGCGTGGGTATGGTGGTCCTCGTGGCTCTTTCCGAGGTCCTCGTCGTGGTGGCTTCAGCAATGGGGAAGCAGAAGAAGGGGAACATCCCCGAAGAATGTTTGATCGTCGCAGTGGAACTGGACGTGGAAATGAGTTTAAGCGGGATGGGGGTGGTCGTAGGAACTGGGGAGCTCCTGGTGATGAAATTGCCCCGGATGTGGAAGAGCCTGTTGCTGAAAATGAGAAGAATGTTGCTCCGGAGCAACAATTGGGAGAGGATGTGGTGAATGATGAGAACAAAGAGGATGCTGCAAAGGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCCTCAAAGAGTATGAAAAGCTCCGTGAAGAGAACAGGAAACTTTTGGCAAAGACTGAGGTGAGGAAGGCTGAGGTGGATGAGGAGTTAGAGAACATGCAGCAGCTTTCTTGCAAGAAAAGCAATGATGAAATATTTGCCAAATTGGGTGGTGATAAGGATAAGCGCAAAGATAATGCTGACAAGGAAGAGAAAGCTAAGAAATCTGTGACCATAACTGAGTTCCTAAAGCCTGCTGAGGGTGAGAGGTACTATAACCCTGGCGGTCGTGGTAGAGGCCGTGGGCGAGGAGGCTCAAGAGGTGGCTTCAACAATGGTAGCAACAGAATCAATGTCTCAGCCCCCTCCATTGAAGATCCCGGGCAGTTCCCTTCATTGAGTGCTAAG

Coding sequence (CDS)

ATGGCAACTATGAACCCTTTTGATCTCTTGGTCGACGACGACAACGAGGACCCTAATCAGCTCGCTTCTGCTCAGCGGTCTGCGCCGTCGCCGCCGTCTAAGAAAGCCCCTGCTCTGGCTCAGCCCGCCAAACCGGCGGCTAAGCTTCCTTCCAAGCCGCTTCCTCCGGCTCAGGCTGTGAGGGAGGCAAGGAACGAAAATAGCCGTGGTCGCGGAGGTGGACGTGGATTTGGACGAGGACGTGGTGGCGGTGGTGGATTTAATAGGGACTCAGCGAATAATGAAAGCAATGCACCAGGTGGCAAGAACGGATTCTCTGATCGTTATCTGCCTCCTGAGGAAGGTGAAAAGGGTGAAAAGCGTGGGTATGGTGGTCCTCGTGGCTCTTTCCGAGGTCCTCGTCGTGGTGGCTTCAGCAATGGGGAAGCAGAAGAAGGGGAACATCCCCGAAGAATGTTTGATCGTCGCAGTGGAACTGGACGTGGAAATGAGTTTAAGCGGGATGGGGGTGGTCGTAGGAACTGGGGAGCTCCTGGTGATGAAATTGCCCCGGATGTGGAAGAGCCTGTTGCTGAAAATGAGAAGAATGTTGCTCCGGAGCAACAATTGGGAGAGGATGTGGTGAATGATGAGAACAAAGAGGATGCTGCAAAGGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCCTCAAAGAGTATGAAAAGCTCCGTGAAGAGAACAGGAAACTTTTGGCAAAGACTGAGGTGAGGAAGGCTGAGGTGGATGAGGAGTTAGAGAACATGCAGCAGCTTTCTTGCAAGAAAAGCAATGATGAAATATTTGCCAAATTGGGTGGTGATAAGGATAAGCGCAAAGATAATGCTGACAAGGAAGAGAAAGCTAAGAAATCTGTGACCATAACTGAGTTCCTAAAGCCTGCTGAGGGTGAGAGGTACTATAACCCTGGCGGTCGTGGTAGAGGCCGTGGGCGAGGAGGCTCAAGAGGTGGCTTCAACAATGGTAGCAACAGAATCAATGTCTCAGCCCCCTCCATTGAAGATCCCGGGCAGTTCCCTTCATTGAGTGCTAAG

Protein sequence

MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAVREARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEKRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLREENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK
Homology
BLAST of MS012288 vs. NCBI nr
Match: XP_022159516.1 (RGG repeats nuclear RNA binding protein A-like [Momordica charantia])

HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
           REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK
Sbjct: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120

Query: 121 RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD 180
           RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD
Sbjct: 121 RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD 180

Query: 181 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 240
           EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV 300
           ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV
Sbjct: 241 ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV 300

Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK 360
           TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK 359

BLAST of MS012288 vs. NCBI nr
Match: XP_022931786.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata])

HSP 1 Score: 563.9 bits (1452), Expect = 9.8e-157
Identity = 324/366 (88.52%), Postives = 339/366 (92.62%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
           RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+   GGKNGFSDRY  PE+GEK  E
Sbjct: 61  RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120

Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
           +RGYGGPRGSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180

Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
           DEIAPDVEEPVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDSVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240

Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
           REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD ADKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKK 300

Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV----SAPSIEDPGQFP 360
           SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV    +APSIED GQFP
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFP 360

BLAST of MS012288 vs. NCBI nr
Match: KAG6571794.1 (RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 563.5 bits (1451), Expect = 1.3e-156
Identity = 324/367 (88.28%), Postives = 339/367 (92.37%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
           RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+   GGKNGFSDRY  PE+GEK  E
Sbjct: 61  RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120

Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
           +RGYGGPRGSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180

Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
           DEIAPDVEEPVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDSVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240

Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
           REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD ADKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKK 300

Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV-----SAPSIEDPGQF 360
           SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV     +APSIED GQF
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAAPSIEDQGQF 360

BLAST of MS012288 vs. NCBI nr
Match: XP_023554179.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.5 bits (1443), Expect = 1.1e-155
Identity = 322/366 (87.98%), Postives = 338/366 (92.35%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAP+LAQPAKP A LPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPSLAQPAKP-ANLPSKPLPPAQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
           RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+   GGKNGFSDRY  PE+GEK  E
Sbjct: 61  RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120

Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
           +RGYGGPRGSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180

Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
           DEIAPDVEEPVAENEKNVAPEQQLGED  V+D NKE+AAKE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDGAVDDNNKEEAAKEAEEKEPEDKEMTLKEYEKL 240

Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
           REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD ADKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKK 300

Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV----SAPSIEDPGQFP 360
           SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNR+ V    +APSIED GQFP
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMTVAAAAAAPSIEDQGQFP 360

BLAST of MS012288 vs. NCBI nr
Match: XP_022971841.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima])

HSP 1 Score: 556.6 bits (1433), Expect = 1.6e-154
Identity = 320/365 (87.67%), Postives = 335/365 (91.78%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
           RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+   GGKNGFSDRY  PE+GEK  E
Sbjct: 61  RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120

Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
           +RGYGGPRGSFRGPRRGGFSNGE EE E PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEAEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180

Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
           DEIAPDVE PVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEAPVAENEKNVAPEQQLGEDGVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240

Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
           REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD  DKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIVDKEEKAKK 300

Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV---SAPSIEDPGQFPS 360
           SVTITEFLKP EGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV   +APSIED GQFPS
Sbjct: 301 SVTITEFLKPTEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAPSIEDQGQFPS 360

BLAST of MS012288 vs. ExPASy Swiss-Prot
Match: O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.8e-74
Identity = 218/378 (57.67%), Postives = 252/378 (66.67%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQ-PAKPAAKLPSKPLPPAQA 60
           MAT+NPFDLL DDD EDP+QLA A        SKK+  ++  PAK A KLPSKPLPPAQA
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDK--SKKSGQVSSLPAKSAPKLPSKPLPPAQA 60

Query: 61  VREARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPE-EGEKG 120
           VREAR++  RG GG  GF RGR   GG+NRD          G NG+S  Y  P  EG+  
Sbjct: 61  VREARSDAPRGGGGRGGFNRGR---GGYNRDD---------GNNGYSGGYTKPSGEGDVS 120

Query: 121 ----EKRGYGG-PRGSFRGP-------RRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFK 180
               E+RG GG PRGSFRG        RRGGFSN E  +GE PRR F+RRSGTGRG++FK
Sbjct: 121 KSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFK 180

Query: 181 RDGGGRRNWGAPGDEIAPDVEEPV-AENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEP 240
           RDG GR NWG PG+EIA + E     E EK+V  E+   +DV  D NKED     EEKEP
Sbjct: 181 RDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEP 240

Query: 241 EDKEMTLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSNDEIFAKLGGDKD 300
           EDKEMTL EYEK+ EE +K L      + +VD ++ E+MQQLS KKSNDEIF KLG DKD
Sbjct: 241 EDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD 300

Query: 301 KRKDNADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGG-SRGGFNNGSN--RIN 360
           KRKD  DKEEKAKK+V+I EFLKPAEG  YY  GGRG GRGRGG  RGG ++G +    N
Sbjct: 301 KRKD--DKEEKAKKAVSINEFLKPAEGGNYYR-GGRG-GRGRGGRGRGGVSSGESGGYRN 355

BLAST of MS012288 vs. ExPASy Swiss-Prot
Match: Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.5e-71
Identity = 182/302 (60.26%), Postives = 216/302 (71.52%), Query Frame = 0

Query: 70  GRGGGRGFGRGR--GGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGE----KRGY 129
           GRGG RG GRGR  G G GFN++SA++E NA G  NGFS RY   E+GE G+    + GY
Sbjct: 4   GRGGPRGGGRGRGPGRGRGFNQESADDE-NAFGSNNGFSGRYRVQEDGESGKLSERRGGY 63

Query: 130 GGPRGSFRGPRRGGFSNGEAE--EGEHPRRMFDRRSGTGRGNEF-KRDGGGRRNWGAPGD 189
           GGPRG F G RRGGF+NG+A   EGE PRR+FDRRSGTGRGNE+ KR+G GR NWG P D
Sbjct: 64  GGPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPAD 123

Query: 190 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 249
           +IA + E PV + EK V  E++ G++   D NK+  A EPEEKEPE+KEMTL+EYEKL E
Sbjct: 124 DIAQETEVPVNDGEKIVEAEKEAGQEEAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLME 183

Query: 250 ENRK--LLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 309
           E RK  L  K E RK  +D+ELE+MQ LS KK++DEIF KLG +K+KRK+     EKA+K
Sbjct: 184 EKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAV---EKARK 243

Query: 310 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNG-SNRINVSAPSIEDPGQFPSLS 360
           + +I EFLKPAEGE Y   GGRGRG GRG  RGGF  G     + SAPSIED GQFPSL 
Sbjct: 244 TQSINEFLKPAEGENYSRRGGRGRGPGRG--RGGFGGGVGGNKSFSAPSIEDVGQFPSLV 299

BLAST of MS012288 vs. ExPASy Swiss-Prot
Match: Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-64
Identity = 195/368 (52.99%), Postives = 236/368 (64.13%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MA++NPFDLL  DD EDP+QLA A     S   +KA A  QP K AAK P+KP PP+QAV
Sbjct: 1   MASLNPFDLL-GDDAEDPSQLAVAL----SQKVEKAAAAVQPPK-AAKFPTKPAPPSQAV 60

Query: 61  REARNENSRGRG--GGR-GFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK 120
           RE+RN    GRG  GGR GF RGR G GG+NRD+ NN+  APG +NGFS  Y  P E   
Sbjct: 61  RESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNND--APGNENGFSGGYRRPSEDAD 120

Query: 121 GEKRG--YGGPR--GSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRR 180
           G  RG   GG R  G   GPRRGG +NGE+ + E P R +DR S TG G   KR+GGGR 
Sbjct: 121 GASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRG 180

Query: 181 NWGAPGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPED---KEM 240
           NWG   D+I P  EEP  E EK+   E+Q GED   +  KE  A+E  +KE E+   +EM
Sbjct: 181 NWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREM 240

Query: 241 TLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSND-EIFAKLGGDKDKRKD 300
           TL+EYEK+ EE +K L  T+V + +VD ++ E+MQQLS KK+ D EIF KLG DK+KRK 
Sbjct: 241 TLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK- 300

Query: 301 NADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIE 357
             D  EKAKKS++I EFLKPA+G+RY   GG  RGRG  G RG   N       +AP+I 
Sbjct: 301 --DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIG 356

BLAST of MS012288 vs. ExPASy Swiss-Prot
Match: O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.0e-60
Identity = 184/375 (49.07%), Postives = 231/375 (61.60%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MA++NPFDLL DDD EDP+Q+ +++         K  A  Q AK + K+P+KP PP+QAV
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTAK-SGKMPTKPPPPSQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
           REARN    GRG GRG   GRGG GG NRDS NN+   P  +NG+   Y   EEG+ G +
Sbjct: 61  REARNAPGGGRGAGRGGSYGRGGRGGNNRDSRNND--GPANENGYGGGYRRSEEGD-GAR 120

Query: 121 RGYGGPRGSFRGPRRGGFSN-GEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
           R  GGP G +RG RRG +SN G++ + E PR+ +DR S T  GNE KRDG GR NWG   
Sbjct: 121 R--GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQ 180

Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLR 240
           D+I P  EE  A  +KN+  E+Q GE    D   E  A++ EEK PEDKEMTL+EYEK+ 
Sbjct: 181 DDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEEK-PEDKEMTLEEYEKVL 240

Query: 241 EENRKLLAKTEVRKAEVD-EELENMQQLSCKKS-NDEIFAKLGGDKDKRKDNADKEEKAK 300
           EE +K L  T+V + +VD +  E MQQLS KKS NDE+F KLG +KDKR    ++EEK +
Sbjct: 241 EEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKTR 300

Query: 301 KSVTITEFLKPAEGERYYNP-----GGR-GRGRGRGGSRGGFNN----------GSNRIN 357
           KS++I EFLKPA+G+ YY P     GGR GRG   G  R G  N          G     
Sbjct: 301 KSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQ 358

BLAST of MS012288 vs. ExPASy TrEMBL
Match: A0A6J1E459 (RGG repeats nuclear RNA binding protein A-like OS=Momordica charantia OX=3673 GN=LOC111025910 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.4e-187
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
           REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK
Sbjct: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120

Query: 121 RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD 180
           RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD
Sbjct: 121 RGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPGD 180

Query: 181 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 240
           EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 EIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV 300
           ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV
Sbjct: 241 ENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKKSV 300

Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK 360
           TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSLSAK 359

BLAST of MS012288 vs. ExPASy TrEMBL
Match: A0A6J1EUM3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111438060 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 4.7e-157
Identity = 324/366 (88.52%), Postives = 339/366 (92.62%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
           RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+   GGKNGFSDRY  PE+GEK  E
Sbjct: 61  RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120

Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
           +RGYGGPRGSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180

Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
           DEIAPDVEEPVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDSVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240

Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
           REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD ADKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKK 300

Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV----SAPSIEDPGQFP 360
           SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV    +APSIED GQFP
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFP 360

BLAST of MS012288 vs. ExPASy TrEMBL
Match: A0A6J1I4B3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111470534 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 7.6e-155
Identity = 320/365 (87.67%), Postives = 335/365 (91.78%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQL SAQRSAP+ PSKKAPALAQPAKP A LPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKP-ANLPSKPLPPAQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKG-E 120
           RE++NENSRGRGGGRGFGRGR GGGGFNRDSANNE+   GGKNGFSDRY  PE+GEK  E
Sbjct: 61  RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNEN---GGKNGFSDRYQAPEDGEKATE 120

Query: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
           +RGYGGPRGSFRGPRRGGFSNGE EE E PRR+++RRSGTGRGNEFKRDG GRRNWGAPG
Sbjct: 121 RRGYGGPRGSFRGPRRGGFSNGETEEAEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPG 180

Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240
           DEIAPDVE PVAENEKNVAPEQQLGED VV+D NKE+A KE EEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEAPVAENEKNVAPEQQLGEDGVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKL 240

Query: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300
           REE+RKLLAKTE+RKAEVDEELENMQQLSCKKSNDEIFAKLG DKDKRKD  DKEEKAKK
Sbjct: 241 REESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIVDKEEKAKK 300

Query: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINV---SAPSIEDPGQFPS 360
           SVTITEFLKP EGERYYNPGGRGRGRGRGGSRGGFNNGSNR+NV   +APSIED GQFPS
Sbjct: 301 SVTITEFLKPTEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAPSIEDQGQFPS 360

BLAST of MS012288 vs. ExPASy TrEMBL
Match: A0A1S3CPW2 (plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103503456 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 7.6e-155
Identity = 321/363 (88.43%), Postives = 339/363 (93.39%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAP+ PSKKAPA AQPAKP AKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKP-AKLPSKPLPPAQAV 60

Query: 61  REARNENSR-GRGGGRGFGRGR-GGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK- 120
           RE++NENSR GRGGGRGFGRGR GGGGGFNRDSANNE++   G+NGFSDRY  PE+GEK 
Sbjct: 61  RESKNENSRGGRGGGRGFGRGRGGGGGGFNRDSANNENS---GRNGFSDRYQTPEDGEKA 120

Query: 121 GEKRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGA 180
            E+RGYG PRGSFRGPRRGGFSNGEAEEGE PRR+++RRSGTGRGNEFKRDG GRRNWGA
Sbjct: 121 AERRGYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGA 180

Query: 181 PGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENK-EDAAKEPEEKEPEDKEMTLKEYE 240
           PGDE APDVEEPVAENEKNVAPEQQLGED V+D NK E+A KEPEEKEPEDKEMTLKEYE
Sbjct: 181 PGDENAPDVEEPVAENEKNVAPEQQLGEDGVDDNNKAEEAVKEPEEKEPEDKEMTLKEYE 240

Query: 241 KLREENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKA 300
           KLREE+RKLLAKTEVRKAEVDEELENMQQLS KK+NDEIFAKLG DKDKRKD ADKEE+A
Sbjct: 241 KLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEERA 300

Query: 301 KKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSL 360
           KKSVTITEFLKPAEGERYYNPGGRGRGRGR GSRGGFNNGSNR+NV+APSIEDPGQFPSL
Sbjct: 301 KKSVTITEFLKPAEGERYYNPGGRGRGRGR-GSRGGFNNGSNRMNVAAPSIEDPGQFPSL 358

BLAST of MS012288 vs. ExPASy TrEMBL
Match: A0A0A0LKF6 (HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914560 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.4e-153
Identity = 318/363 (87.60%), Postives = 336/363 (92.56%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASA RSAP  PSKKAPA AQPAKP AKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAPAQPAKP-AKLPSKPLPPAQAV 60

Query: 61  REARNENSR-GRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK-G 120
           RE++N+N R GRGGGRGFGRGRGGGGGFNRDSANNE+   GG+NGFSDRY  PE+GEK  
Sbjct: 61  RESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNEN---GGRNGFSDRYQTPEDGEKAA 120

Query: 121 EKRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAP 180
           E+RGYG PRGSFRGPRR GFSNGEAEEGE PRR+++RRSGTGRGNEFKR+G GRRNWGAP
Sbjct: 121 ERRGYGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAP 180

Query: 181 GDEIAPDVEEPVAENEKNVAPEQQLGED-VVNDENK-EDAAKEPEEKEPEDKEMTLKEYE 240
           GDE APDVEEPVAENEKNVAPEQQLGED VV+D NK E+A KEPEEKEPEDKEMTLKEYE
Sbjct: 181 GDENAPDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYE 240

Query: 241 KLREENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKA 300
           KLREE+RKLLAKTEVRKAEVDEELENMQQLS KK+NDEIFAKLG DKDKRKD ADKEE+A
Sbjct: 241 KLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERA 300

Query: 301 KKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIEDPGQFPSL 360
           KKSVTITEFLKPAEGERYYNPGGRGRGRGR GSRGGFNNGSNR+NV+APSIEDPGQFPSL
Sbjct: 301 KKSVTITEFLKPAEGERYYNPGGRGRGRGR-GSRGGFNNGSNRMNVAAPSIEDPGQFPSL 358

BLAST of MS012288 vs. TAIR 10
Match: AT4G16830.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 280.4 bits (716), Expect = 2.0e-75
Identity = 218/378 (57.67%), Postives = 252/378 (66.67%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQ-PAKPAAKLPSKPLPPAQA 60
           MAT+NPFDLL DDD EDP+QLA A        SKK+  ++  PAK A KLPSKPLPPAQA
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDK--SKKSGQVSSLPAKSAPKLPSKPLPPAQA 60

Query: 61  VREARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPE-EGEKG 120
           VREAR++  RG GG  GF RGR   GG+NRD          G NG+S  Y  P  EG+  
Sbjct: 61  VREARSDAPRGGGGRGGFNRGR---GGYNRDD---------GNNGYSGGYTKPSGEGDVS 120

Query: 121 ----EKRGYGG-PRGSFRGP-------RRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFK 180
               E+RG GG PRGSFRG        RRGGFSN E  +GE PRR F+RRSGTGRG++FK
Sbjct: 121 KSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFK 180

Query: 181 RDGGGRRNWGAPGDEIAPDVEEPV-AENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEP 240
           RDG GR NWG PG+EIA + E     E EK+V  E+   +DV  D NKED     EEKEP
Sbjct: 181 RDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEP 240

Query: 241 EDKEMTLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSNDEIFAKLGGDKD 300
           EDKEMTL EYEK+ EE +K L      + +VD ++ E+MQQLS KKSNDEIF KLG DKD
Sbjct: 241 EDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD 300

Query: 301 KRKDNADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGG-SRGGFNNGSN--RIN 360
           KRKD  DKEEKAKK+V+I EFLKPAEG  YY  GGRG GRGRGG  RGG ++G +    N
Sbjct: 301 KRKD--DKEEKAKKAVSINEFLKPAEGGNYYR-GGRG-GRGRGGRGRGGVSSGESGGYRN 355

BLAST of MS012288 vs. TAIR 10
Match: AT5G47210.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 248.4 bits (633), Expect = 8.5e-66
Identity = 195/368 (52.99%), Postives = 236/368 (64.13%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MA++NPFDLL  DD EDP+QLA A     S   +KA A  QP K AAK P+KP PP+QAV
Sbjct: 1   MASLNPFDLL-GDDAEDPSQLAVAL----SQKVEKAAAAVQPPK-AAKFPTKPAPPSQAV 60

Query: 61  REARNENSRGRG--GGR-GFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK 120
           RE+RN    GRG  GGR GF RGR G GG+NRD+ NN+  APG +NGFS  Y  P E   
Sbjct: 61  RESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNND--APGNENGFSGGYRRPSEDAD 120

Query: 121 GEKRG--YGGPR--GSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRR 180
           G  RG   GG R  G   GPRRGG +NGE+ + E P R +DR S TG G   KR+GGGR 
Sbjct: 121 GASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRG 180

Query: 181 NWGAPGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPED---KEM 240
           NWG   D+I P  EEP  E EK+   E+Q GED   +  KE  A+E  +KE E+   +EM
Sbjct: 181 NWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREM 240

Query: 241 TLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSND-EIFAKLGGDKDKRKD 300
           TL+EYEK+ EE +K L  T+V + +VD ++ E+MQQLS KK+ D EIF KLG DK+KRK 
Sbjct: 241 TLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK- 300

Query: 301 NADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRINVSAPSIE 357
             D  EKAKKS++I EFLKPA+G+RY   GG  RGRG  G RG   N       +AP+I 
Sbjct: 301 --DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIG 356

BLAST of MS012288 vs. TAIR 10
Match: AT4G17520.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 233.4 bits (594), Expect = 2.8e-61
Identity = 184/375 (49.07%), Postives = 231/375 (61.60%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MA++NPFDLL DDD EDP+Q+ +++         K  A  Q AK + K+P+KP PP+QAV
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTAK-SGKMPTKPPPPSQAV 60

Query: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEKGEK 120
           REARN    GRG GRG   GRGG GG NRDS NN+   P  +NG+   Y   EEG+ G +
Sbjct: 61  REARNAPGGGRGAGRGGSYGRGGRGGNNRDSRNND--GPANENGYGGGYRRSEEGD-GAR 120

Query: 121 RGYGGPRGSFRGPRRGGFSN-GEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180
           R  GGP G +RG RRG +SN G++ + E PR+ +DR S T  GNE KRDG GR NWG   
Sbjct: 121 R--GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQ 180

Query: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPEDKEMTLKEYEKLR 240
           D+I P  EE  A  +KN+  E+Q GE    D   E  A++ EEK PEDKEMTL+EYEK+ 
Sbjct: 181 DDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEEK-PEDKEMTLEEYEKVL 240

Query: 241 EENRKLLAKTEVRKAEVD-EELENMQQLSCKKS-NDEIFAKLGGDKDKRKDNADKEEKAK 300
           EE +K L  T+V + +VD +  E MQQLS KKS NDE+F KLG +KDKR    ++EEK +
Sbjct: 241 EEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKTR 300

Query: 301 KSVTITEFLKPAEGERYYNP-----GGR-GRGRGRGGSRGGFNN----------GSNRIN 357
           KS++I EFLKPA+G+ YY P     GGR GRG   G  R G  N          G     
Sbjct: 301 KSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQ 358

BLAST of MS012288 vs. TAIR 10
Match: AT4G16830.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 231.9 bits (590), Expect = 8.2e-61
Identity = 180/318 (56.60%), Postives = 209/318 (65.72%), Query Frame = 0

Query: 60  VREARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPE-EGEKG 119
           VREAR++  RG GG  GF RGR   GG+NRD          G NG+S  Y  P  EG+  
Sbjct: 48  VREARSDAPRGGGGRGGFNRGR---GGYNRDD---------GNNGYSGGYTKPSGEGDVS 107

Query: 120 ----EKRGYGG-PRGSFRGP-------RRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFK 179
               E+RG GG PRGSFRG        RRGGFSN E  +GE PRR F+RRSGTGRG++FK
Sbjct: 108 KSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFK 167

Query: 180 RDGGGRRNWGAPGDEIAPDVEEPV-AENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEP 239
           RDG GR NWG PG+EIA + E     E EK+V  E+   +DV  D NKED     EEKEP
Sbjct: 168 RDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEP 227

Query: 240 EDKEMTLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSNDEIFAKLGGDKD 299
           EDKEMTL EYEK+ EE +K L      + +VD ++ E+MQQLS KKSNDEIF KLG DKD
Sbjct: 228 EDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD 287

Query: 300 KRKDNADKEEKAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGG-SRGGFNNGSN--RIN 359
           KRKD  DKEEKAKK+V+I EFLKPAEG  YY  GGRG GRGRGG  RGG ++G +    N
Sbjct: 288 KRKD--DKEEKAKKAVSINEFLKPAEGGNYYR-GGRG-GRGRGGRGRGGVSSGESGGYRN 345

BLAST of MS012288 vs. TAIR 10
Match: AT5G47210.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 202.6 bits (514), Expect = 5.3e-52
Identity = 162/307 (52.77%), Postives = 199/307 (64.82%), Query Frame = 0

Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60
           MA++NPFDLL  DD EDP+QLA A     S   +KA A  QP K AAK P+KP PP+QAV
Sbjct: 1   MASLNPFDLL-GDDAEDPSQLAVAL----SQKVEKAAAAVQPPK-AAKFPTKPAPPSQAV 60

Query: 61  REARNENSRGRG--GGR-GFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK 120
           RE+RN    GRG  GGR GF RGR G GG+NRD+ NN+  APG +NGFS  Y  P E   
Sbjct: 61  RESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNND--APGNENGFSGGYRRPSEDAD 120

Query: 121 GEKRG--YGGPR--GSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRR 180
           G  RG   GG R  G   GPRRGG +NGE+ + E P R +DR S TG G   KR+GGGR 
Sbjct: 121 GASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRG 180

Query: 181 NWGAPGDEIAPDVEEPVAENEKNVAPEQQLGEDVVNDENKEDAAKEPEEKEPED---KEM 240
           NWG   D+I P  EEP  E EK+   E+Q GED   +  KE  A+E  +KE E+   +EM
Sbjct: 181 NWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREM 240

Query: 241 TLKEYEKLREENRKLLAKTEVRKAEVDEEL-ENMQQLSCKKSND-EIFAKLGGDKDKRKD 296
           TL+EYEK+ EE +K L  T+V + +VD ++ E+MQQLS KK+ D EIF KLG DK+KRKD
Sbjct: 241 TLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKD 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159516.16.9e-187100.00RGG repeats nuclear RNA binding protein A-like [Momordica charantia][more]
XP_022931786.19.8e-15788.52RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata][more]
KAG6571794.11.3e-15688.28RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp... [more]
XP_023554179.11.1e-15587.98RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo][more]
XP_022971841.11.6e-15487.67RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
O235232.8e-7457.67RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG... [more]
Q9SQ566.5e-7160.26RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409... [more]
Q9LVT81.2e-6452.99RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG... [more]
O235934.0e-6049.07RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG... [more]
Match NameE-valueIdentityDescription
A0A6J1E4593.4e-187100.00RGG repeats nuclear RNA binding protein A-like OS=Momordica charantia OX=3673 GN... [more]
A0A6J1EUM34.7e-15788.52RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1I4B37.6e-15587.67RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A1S3CPW27.6e-15588.43plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=36... [more]
A0A0A0LKF62.4e-15387.60HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914... [more]
Match NameE-valueIdentityDescription
AT4G16830.12.0e-7557.67Hyaluronan / mRNA binding family [more]
AT5G47210.18.5e-6652.99Hyaluronan / mRNA binding family [more]
AT4G17520.12.8e-6149.07Hyaluronan / mRNA binding family [more]
AT4G16830.38.2e-6156.60Hyaluronan / mRNA binding family [more]
AT5G47210.35.3e-5252.77Hyaluronan / mRNA binding family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..266
NoneNo IPR availableGENE3D6.10.140.1040coord: 147..258
e-value: 1.1E-8
score: 37.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..301
NoneNo IPR availablePANTHERPTHR12299:SF64PLASMINOGEN ACTIVATOR INHIBITOR 1 RNA-BINDING PROTEIN-LIKEcoord: 1..359
IPR006861Hyaluronan/mRNA-binding proteinSMARTSM01233HABP4_PAI_RBP1_2coord: 149..257
e-value: 4.9E-36
score: 135.7
IPR006861Hyaluronan/mRNA-binding proteinPFAMPF04774HABP4_PAI-RBP1coord: 149..256
e-value: 3.1E-25
score: 89.2
IPR019084Stm1-like, N-terminalPFAMPF09598Stm1_Ncoord: 1..74
e-value: 8.3E-21
score: 74.6
IPR039764RNA binding protein HABP4/SERBP1PANTHERPTHR12299HYALURONIC ACID-BINDING PROTEIN 4coord: 1..359

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS012288.1MS012288.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding