MS012090 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTAAAGATGTTCCCTCTCATCAAGTGGGCTGCCATTGTTGTTTCTCTGCTACTTGTTGTTAACCACTCTTCATCTTTGGTTGCAGCCAATCTCATTACAGAAACATGTTCGAAGACATCCCATGTTGACCTCTGCATATCGAGCCTTGGGGTCGACCCTCGAAGCCCGACGGCCGATGTTAGGCGTCTTGCCGAGATCATCCTCAAAGAGACATTAGCGAACGCCCAAGAAATTCTGGCACATAGAGTTGAGAGCTTCATCAACCAGACGACAGATCCTGCAGTGAAGGAATGTCTCGCTGCCTGCAAAGTGCTGTATCGACTTGTAACCAACTCGACGATCCCAAGCGCAATGTGGCAACTCTCG TTAAAGATGTTCCCTCTCATCAAGTGGGCTGCCATTGTTGTTTCTCTGCTACTTGTTGTTAACCACTCTTCATCTTTGGTTGCAGCCAATCTCATTACAGAAACATGTTCGAAGACATCCCATGTTGACCTCTGCATATCGAGCCTTGGGGTCGACCCTCGAAGCCCGACGGCCGATGTTAGGCGTCTTGCCGAGATCATCCTCAAAGAGACATTAGCGAACGCCCAAGAAATTCTGGCACATAGAGTTGAGAGCTTCATCAACCAGACGACAGATCCTGCAGTGAAGGAATGTCTCGCTGCCTGCAAAGTGCTGTATCGACTTGTAACCAACTCGACGATCCCAAGCGCAATGTGGCAACTCTCG TTAAAGATGTTCCCTCTCATCAAGTGGGCTGCCATTGTTGTTTCTCTGCTACTTGTTGTTAACCACTCTTCATCTTTGGTTGCAGCCAATCTCATTACAGAAACATGTTCGAAGACATCCCATGTTGACCTCTGCATATCGAGCCTTGGGGTCGACCCTCGAAGCCCGACGGCCGATGTTAGGCGTCTTGCCGAGATCATCCTCAAAGAGACATTAGCGAACGCCCAAGAAATTCTGGCACATAGAGTTGAGAGCTTCATCAACCAGACGACAGATCCTGCAGTGAAGGAATGTCTCGCTGCCTGCAAAGTGCTGTATCGACTTGTAACCAACTCGACGATCCCAAGCGCAATGTGGCAACTCTCG LKMFPLIKWAAIVVSLLLVVNHSSSLVAANLITETCSKTSHVDLCISSLGVDPRSPTADVRRLAEIILKETLANAQEILAHRVESFINQTTDPAVKECLAACKVLYRLVTNSTIPSAMWQLS Homology
BLAST of MS012090 vs. NCBI nr
Match: XP_023890881.1 (cell wall / vacuolar inhibitor of fructosidase 1-like [Quercus suber]) HSP 1 Score: 75.1 bits (183), Expect = 4.7e-10 Identity = 43/95 (45.26%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of MS012090 vs. NCBI nr
Match: XP_030975931.1 (cell wall / vacuolar inhibitor of fructosidase 1-like [Quercus lobata]) HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09 Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of MS012090 vs. NCBI nr
Match: XP_017969808.1 (PREDICTED: pectinesterase inhibitor [Theobroma cacao]) HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 0
BLAST of MS012090 vs. NCBI nr
Match: KAG5237625.1 (pectinesterase inhibitor [Salix suchowensis]) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09 Identity = 45/117 (38.46%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of MS012090 vs. NCBI nr
Match: XP_007221576.1 (cell wall / vacuolar inhibitor of fructosidase 2 [Prunus persica] >ONI14778.1 hypothetical protein PRUPE_3G007700 [Prunus persica]) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09 Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 0
BLAST of MS012090 vs. ExPASy Swiss-Prot
Match: O49603 (Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis thaliana OX=3702 GN=C/VIF2 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 6.2e-05 Identity = 35/110 (31.82%), Postives = 56/110 (50.91%), Query Frame = 0
BLAST of MS012090 vs. ExPASy Swiss-Prot
Match: Q0J8J8 (Pectinesterase inhibitor 28 OS=Oryza sativa subsp. japonica OX=39947 GN=PMEI28 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04 Identity = 32/87 (36.78%), Postives = 43/87 (49.43%), Query Frame = 0
BLAST of MS012090 vs. ExPASy Swiss-Prot
Match: P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2) HSP 1 Score: 46.2 bits (108), Expect = 3.1e-04 Identity = 35/104 (33.65%), Postives = 56/104 (53.85%), Query Frame = 0
BLAST of MS012090 vs. ExPASy TrEMBL
Match: A0A7N2LXR4 (PMEI domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 5.1e-10 Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of MS012090 vs. ExPASy TrEMBL
Match: M5XUJ1 (PMEI domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_3G007700 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.6e-10 Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 0
BLAST of MS012090 vs. ExPASy TrEMBL
Match: A0A5N5L7V8 (PMEI domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_016388 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.6e-10 Identity = 44/117 (37.61%), Postives = 72/117 (61.54%), Query Frame = 0
BLAST of MS012090 vs. ExPASy TrEMBL
Match: A0A5E4F258 (PREDICTED: cell wall OS=Prunus dulcis OX=3755 GN=ALMOND_2B015884 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.5e-09 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 0
BLAST of MS012090 vs. ExPASy TrEMBL
Match: A0A061DR99 (PMEI domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_004852 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.5e-09 Identity = 44/115 (38.26%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of MS012090 vs. TAIR 10
Match: AT5G64620.1 (cell wall / vacuolar inhibitor of fructosidase 2 ) HSP 1 Score: 48.5 bits (114), Expect = 4.4e-06 Identity = 35/110 (31.82%), Postives = 56/110 (50.91%), Query Frame = 0
BLAST of MS012090 vs. TAIR 10
Match: AT1G47960.1 (cell wall / vacuolar inhibitor of fructosidase 1 ) HSP 1 Score: 43.1 bits (100), Expect = 1.8e-04 Identity = 31/122 (25.41%), Postives = 61/122 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|