Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGTCGTCTTCGTCATTCTCTTCTTTCGAGAACTCTGTTTCTCGGTGGGATTTTCTTAGTTTGGTCATTTTACGCCCGATCCTGGCAGTTGTTTTCACGTTCTCCTTGATTTCTCTTGGTAATTTATTCTCCTTTCTCGTGATTATTTTGGATAATTCCTGTATTTCCGATGTCTATTTCTGCTTAGGTTTTGAAATCTAAGATTCAATTTCTATTTCTGTCATATCGATTCAATCCTGAAATTGCACTCTTAATTGGTGTCGTGGAGTAGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTTCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAGCCCGTCAGGCCGAAGCCTCCGACGCGCCGACTATCGAAGTTTTATAATAGCCGGAATTCTCAAACTTCAGCTTCTGGGTGG
mRNA sequence
ATGGAGTCGTCGTCTTCGTCATTCTCTTCTTTCGAGAACTCTGTTTCTCGGTGGGATTTTCTTAGTTTGGTCATTTTACGCCCGATCCTGGCAGTTGTTTTCACGTTCTCCTTGATTTCTCTTGTAGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTTCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAGCCCGTCAGGCCGAAGCCTCCGACGCGCCGACTATCGAAGTTTTATAATAGCCGGAATTCTCAAACTTCAGCTTCTGGGTGG
Coding sequence (CDS)
ATGGAGTCGTCGTCTTCGTCATTCTCTTCTTTCGAGAACTCTGTTTCTCGGTGGGATTTTCTTAGTTTGGTCATTTTACGCCCGATCCTGGCAGTTGTTTTCACGTTCTCCTTGATTTCTCTTGTAGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTTCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAGCCCGTCAGGCCGAAGCCTCCGACGCGCCGACTATCGAAGTTTTATAATAGCCGGAATTCTCAAACTTCAGCTTCTGGGTGG
Protein sequence
MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQEIFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASGW
Homology
BLAST of MS001061 vs. NCBI nr
Match:
XP_022997298.1 (uncharacterized protein LOC111492244 isoform X1 [Cucurbita maxima])
HSP 1 Score: 153.7 bits (387), Expect = 8.0e-34
Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS+S+WD+LSL ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. NCBI nr
Match:
XP_022997299.1 (uncharacterized protein LOC111492244 isoform X2 [Cucurbita maxima] >XP_022997300.1 uncharacterized protein LOC111492244 isoform X3 [Cucurbita maxima])
HSP 1 Score: 153.7 bits (387), Expect = 8.0e-34
Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS+S+WD+LSL ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. NCBI nr
Match:
XP_023545613.1 (uncharacterized protein LOC111804995 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545614.1 uncharacterized protein LOC111804995 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 152.5 bits (384), Expect = 1.8e-33
Identity = 82/93 (88.17%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS+S+WD+L+L ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSLSQWDYLNLFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. NCBI nr
Match:
KAG7029607.1 (hypothetical protein SDJN02_07947 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 151.8 bits (382), Expect = 3.0e-33
Identity = 82/93 (88.17%), Postives = 88/93 (94.62%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS S+WD+L+L ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSFSQWDYLNLFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. NCBI nr
Match:
XP_022961695.1 (uncharacterized protein LOC111462391 isoform X2 [Cucurbita moschata] >XP_022961696.1 uncharacterized protein LOC111462391 isoform X3 [Cucurbita moschata])
HSP 1 Score: 151.0 bits (380), Expect = 5.2e-33
Identity = 81/93 (87.10%), Postives = 88/93 (94.62%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS S+WD+L++ ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSFSQWDYLNIFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. ExPASy TrEMBL
Match:
A0A6J1KB20 (uncharacterized protein LOC111492244 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492244 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 3.9e-34
Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS+S+WD+LSL ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. ExPASy TrEMBL
Match:
A0A6J1KDG2 (uncharacterized protein LOC111492244 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492244 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 3.9e-34
Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS+S+WD+LSL ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. ExPASy TrEMBL
Match:
A0A6J1HD13 (uncharacterized protein LOC111462391 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462391 PE=4 SV=1)
HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33
Identity = 81/93 (87.10%), Postives = 88/93 (94.62%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS S+WD+L++ ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSFSQWDYLNIFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. ExPASy TrEMBL
Match:
A0A6J1HES4 (uncharacterized protein LOC111462391 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462391 PE=4 SV=1)
HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33
Identity = 81/93 (87.10%), Postives = 88/93 (94.62%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSFSSFENS S+WD+L++ ILRPILAVVFTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFSSFENSFSQWDYLNIFILRPILAVVFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASG 94
IFGLRKK V+PKPPTRRLSKFYN+ +SQTSASG
Sbjct: 61 IFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 92
BLAST of MS001061 vs. ExPASy TrEMBL
Match:
A0A5A7V8X8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001200 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 9.5e-33
Identity = 79/94 (84.04%), Postives = 85/94 (90.43%), Query Frame = 0
Query: 1 MESSSSSFSSFENSVSRWDFLSLVILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQE 60
MESSSSSF SFE S+S WD+L L ILRPILA++FTFSLISL GWFLAWKLVLVHVPLVQE
Sbjct: 1 MESSSSSFPSFEYSLSHWDYLDLYILRPILAILFTFSLISL-GWFLAWKLVLVHVPLVQE 60
Query: 61 IFGLRKKPVRPKPPTRRLSKFYNSRNSQTSASGW 95
IFGLRKKP + KPPTRRLSKFY+S NSQTSASGW
Sbjct: 61 IFGLRKKPAKSKPPTRRLSKFYDSLNSQTSASGW 93
BLAST of MS001061 vs. TAIR 10
Match:
AT1G36380.1 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 14 Blast hits to 14 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 0
Query: 25 ILRPILAVVFTFSLISLVGWFLAWKLVLVHVPLVQEIFGLRKKPVRPKPPTR-RLSKFYN 84
++RP+LA+ F I+L WFLAWKLVL HVPLVQEIFGLRKK PKP +R R++KFY
Sbjct: 16 LIRPLLAISFVICFIAL-WWFLAWKLVLSHVPLVQEIFGLRKKTFIPKPESRGRIAKFYK 75
Query: 85 SRNSQ 89
S +SQ
Sbjct: 76 SISSQ 79
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022997298.1 | 8.0e-34 | 89.25 | uncharacterized protein LOC111492244 isoform X1 [Cucurbita maxima] | [more] |
| XP_022997299.1 | 8.0e-34 | 89.25 | uncharacterized protein LOC111492244 isoform X2 [Cucurbita maxima] >XP_022997300... | [more] |
| XP_023545613.1 | 1.8e-33 | 88.17 | uncharacterized protein LOC111804995 isoform X1 [Cucurbita pepo subsp. pepo] >XP... | [more] |
| KAG7029607.1 | 3.0e-33 | 88.17 | hypothetical protein SDJN02_07947 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_022961695.1 | 5.2e-33 | 87.10 | uncharacterized protein LOC111462391 isoform X2 [Cucurbita moschata] >XP_0229616... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1KB20 | 3.9e-34 | 89.25 | uncharacterized protein LOC111492244 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1KDG2 | 3.9e-34 | 89.25 | uncharacterized protein LOC111492244 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1HD13 | 2.5e-33 | 87.10 | uncharacterized protein LOC111462391 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1HES4 | 2.5e-33 | 87.10 | uncharacterized protein LOC111462391 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A5A7V8X8 | 9.5e-33 | 84.04 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G36380.1 | 1.3e-13 | 63.08 | unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structu... | [more] |
