Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGTTTGTTTAAATCAGGTTATGATTGATGAAGAAATTCCTTGTCAAAAGTTAGGTTTCCATCTCCCTTCAAGGTTGAACTCGAACCTTCAAAGGAATCCTTAGAAGGTTGATACGGACCTCATCGGAGTTTCACCAAAAGTCCAAGGAAGATTCTGATTACAGGGAGCAATCTTGTCAAATCTCCAGCAATTGTGAACTCCGTTAAAGGTAGTTTGCTGTTATTCGCTAAGGCGTTAAGTAATTCAGATGACCGTTCAAATTCAGAAGGGAGCAAAAGTATGGAAGATGAAGAGGTGCAATTAGTGAGAAAAGAGAAAAATCCTGCTGTGCCACCTGTCTTACCCATTGAATTCCAAGAGCCACTCGTGAGTAATGATCTGCTGGCTAAGTCCTTTTCGGTACCTAATAGGAAGTTAAGAGTTAATTTTGCAGCTAACAAAAGACTAAATGCCAAAACGCCCAATTTTTTTTAATTTTCAGCAAAGGTAGCCTATCAGTCACAAGGCCCTCTTACAAACACTTTGAGCTCCTCCTACAGCAGATCGTTGCCCCAAGTTTATTCAGTTCCGTTAG
mRNA sequence
TATGGTTTGTTTAAATCAGGTTATGATTGATGAAGAAATTCCTTGTCAAAAGTTAGGTTTCCATCTCCCTTCAAGGTTGAACTCGAACCTTCAAAGGAATCCTTAGAAGGTTGATACGGACCTCATCGGAGTTTCACCAAAAGTCCAAGGAAGATTCTGATTACAGGGAGCAATCTTGTCAAATCTCCAGCAATTGTGAACTCCGTTAAAGGTAGTTTGCTGTTATTCGCTAAGGCGTTAAGTAATTCAGATGACCGTTCAAATTCAGAAGGGAGCAAAAGTATGGAAGATGAAGAGGTGCAATTAGTGAGAAAAGAGAAAAATCCTGCTGTGCCACCTGTCTTACCCATTGAATTCCAAGAGCCACTCGTGAGTAATGATCTGCTGGCTAAGTCCTTTTCGGTACCTAATAGGAAGTTAAGAGTTAATTTTGCAGCTAACAAAAGACTAAATGCCAAAACGCCCAATTTTTTTTAATTTTCAGCAAAGGTAGCCTATCAGTCACAAGGCCCTCTTACAAACACTTTGAGCTCCTCCTACAGCAGATCGTTGCCCCAAGTTTATTCAGTTCCGTTAG
Coding sequence (CDS)
ATGGAAGATGAAGAGGTGCAATTAGTGAGAAAAGAGAAAAATCCTGCTGTGCCACCTGTCTTACCCATTGAATTCCAAGAGCCACTCGTGAGTAATGATCTGCTGGCTAAGTCCTTTTCGGTACCTAATAGGAAGTTAAGAGTTAATTTTGCAGCTAACAAAAGACTAAATGCCAAAACGCCCAATTTTTTTTAA
Protein sequence
MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKLRVNFAANKRLNAKTPNFF
Homology
BLAST of MELO3C034916 vs. NCBI nr
Match:
TYK20921.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])
HSP 1 Score: 83.6 bits (205), Expect = 6.9e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 1 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKL 47
MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFS RKL
Sbjct: 143 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSSHTRKL 188
BLAST of MELO3C034916 vs. NCBI nr
Match:
KAA0032563.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])
HSP 1 Score: 83.6 bits (205), Expect = 6.9e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 1 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKL 47
MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFS RKL
Sbjct: 143 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSSHTRKL 188
BLAST of MELO3C034916 vs. NCBI nr
Match:
TYK22383.1 (uncharacterized protein E5676_scaffold173G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 81.3 bits (199), Expect = 3.4e-12
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 0
Query: 1 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVS-NDLLAKSFSVPNRKLRVNFAANKRLNAK 60
+EDEEVQLVR+EKNP VPPVLPIE D AKSFSV N+KLRVNFA NK+L+AK
Sbjct: 162 VEDEEVQLVREEKNPVVPPVLPIEIPRTTHEFKDTAAKSFSVLNKKLRVNFADNKKLDAK 221
Query: 61 TPNFF 65
PN F
Sbjct: 222 PPNLF 226
BLAST of MELO3C034916 vs. ExPASy TrEMBL
Match:
A0A5A7SQA9 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43053G00220 PE=4 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 3.3e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 1 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKL 47
MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFS RKL
Sbjct: 143 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSSHTRKL 188
BLAST of MELO3C034916 vs. ExPASy TrEMBL
Match:
A0A5D3DBC6 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00640 PE=4 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 3.3e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 1 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKL 47
MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFS RKL
Sbjct: 143 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSSHTRKL 188
BLAST of MELO3C034916 vs. ExPASy TrEMBL
Match:
A0A5D3DFR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00060 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 1.7e-12
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 0
Query: 1 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVS-NDLLAKSFSVPNRKLRVNFAANKRLNAK 60
+EDEEVQLVR+EKNP VPPVLPIE D AKSFSV N+KLRVNFA NK+L+AK
Sbjct: 162 VEDEEVQLVREEKNPVVPPVLPIEIPRTTHEFKDTAAKSFSVLNKKLRVNFADNKKLDAK 221
Query: 61 TPNFF 65
PN F
Sbjct: 222 PPNLF 226
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| TYK20921.1 | 6.9e-13 | 93.48 | Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] | [more] |
| KAA0032563.1 | 6.9e-13 | 93.48 | Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] | [more] |
| TYK22383.1 | 3.4e-12 | 67.69 | uncharacterized protein E5676_scaffold173G00060 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SQA9 | 3.3e-13 | 93.48 | Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... | [more] |
| A0A5D3DBC6 | 3.3e-13 | 93.48 | Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... | [more] |
| A0A5D3DFR0 | 1.7e-12 | 67.69 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
