Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCTATGATAAGCCAACGACACGGAAACAAAAGAAGGCATCATGCTCCAAATCTACCTAGAACCTTGATGGTTCGAAGATCTAGGCTCGTGAATGATCCTCTAGGGAGAACATGTTATTTGCGGAACTTAGAATCAGGAACGATTTGAAGGATGAAACATATTTAGCTACCTTCTTATTTTGCTGGTTATGCCTTTTCGTATTTCCACAGAAAGGATCATTTCTTCGTTCCAGAGTATTTATGGCTGCAAGCTTAATGGCTACTGGCACTATTTATAGTCTTGCAGTTCTAGTTTTGGCGAATATATATCATGTGCTAGGTTTGATAACCAAAGCCTCCAATCCGATAGGACGCATGGACTTTCACTTTCCCATGCATTACGTCCATGGCTAGTTAGCCCATTATTTTGGCACGCATTATCCACTTCCTACAGAAGTTCGAGCCCTCAAGACGACTAACTTTTTCACCGAAGGTGGGTCTATTTATTTTGACGAATATAAGGCACGAGAACTGATCCATAATGGTGCAAGAATTTTGTGGCACGCTAACCTCCAGAATAGGAATAAACATGAACGCATGGTTGATACTTATGATTCATCGTTTCTGCAGACTTTTTATTTTGTGAGCATGCGTTCCAGCTACTTGTCCTCTCGCTGTAGAAATACTTGGATCATAACATTATACAGTCCGTATCGATTTGGATGACAATCTGGTTTTTACCAGGATATCCCTAATGATATAGGGGCATGCCACTTGTGATCACACCAGATAATATGTTATATCACTAGATAATATGTACGAGGCATAATACTTTATCTGAGTTATACTTGCTTGCCCGTTCGTTAGAGCGTTGCAAGCATGTGACACAGCGATTTATAGACTGGTGGGCCACGGGGCACGAGACCTATTTTGAGGATAACATACATCATTTAGTGACTAGTGCCATTCTTCCCCCTTCACAACCCAAACTACCCAAGAACCGAGGGAGCAACCTGGATGGTAAAGAAATTCGTCTGGTTGAGGCGATGGCTGCTACTCTCGAAGAGGAGATAAAGGAGCATAAAGATGAGAGCGATAGCAGTAAAAATGATCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGTTATTAGGTGATGATCCTGACAGAAGGGGTTCAAGTGCTTTGGGAGTCCCTAATGTTCCACCACTGGTTTGCACATTTTCCTTTCTTAATT
mRNA sequence
AGCTATGATAAGCCAACGACACGGAAACAAAAGAAGGCATCATGCTCCAAATCTACCTAGAACCTTGATGGTTCGAAGATCTAGGCTCGTGAATGATCCTCTAGGGAGAACATGTTATTTGCGGAACTTAGAATCAGGAACGATTTGAAGGATGAAACATATTTAGCTACCTTCTTATTTTGCTGGTTATGCCTTTTCGTATTTCCACAGAAAGGATCATTTCTTCGTTCCAGAGTATTTATGGCTGCAAGCTTAATGGCTACTGGCACTATTTATAGTCTTGCAGTTCTAGTTTTGGCGAATATATATCATGTGCTAGGTTTGATAACCAAAGCCTCCAATCCGATAGGACGCATGGACTTTCACTTTCCCATGCATTACGTCCATGGCTAGTTAGCCCATTATTTTGGCACGCATTATCCACTTCCTACAGAAGTTCGAGCCCTCAAGACGACTAACTTTTTCACCGAAGGTGGGTCTATTTATTTTGACGAATATAAGGCACGAGAACTGATCCATAATGGTGCAAGAATTTTGTGGCACGCTAACCTCCAGAATAGGAATAAACATGAACGCATGGTTGATACTTATGATTCATCGTTTCTGCAGACTTTTTATTTTGTGAGCATGCGTTCCAGCTACTTGTCCTCTCGCTGTAGAAATACTTGGATCATAACATTATACAGTCCGTATCGATTTGGATGACAATCTGGTTTTTACCAGGATATCCCTAATGATATAGGGGCATGCCACTTGTGATCACACCAGATAATATGTTATATCACTAGATAATATGTACGAGGCATAATACTTTATCTGAGTTATACTTGCTTGCCCGTTCGTTAGAGCGTTGCAAGCATGTGACACAGCGATTTATAGACTGGTGGGCCACGGGGCACGAGACCTATTTTGAGGATAACATACATCATTTAGTGACTAGTGCCATTCTTCCCCCTTCACAACCCAAACTACCCAAGAACCGAGGGAGCAACCTGGATGGTAAAGAAATTCGTCTGGTTGAGGCGATGGCTGCTACTCTCGAAGAGGAGATAAAGGAGCATAAAGATGAGAGCGATAGCAGTAAAAATGATCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGTTATTAGGTGATGATCCTGACAGAAGGGGTTCAAGTGCTTTGGGAGTCCCTAATGTTCCACCACTGGTTTGCACATTTTCCTTTCTTAATT
Coding sequence (CDS)
ATGTTATTTGCGGAACTTAGAATCAGGAACGATTTGAAGGATGAAACATATTTAGCTACCTTCTTATTTTGCTGGTTATGCCTTTTCGTATTTCCACAGAAAGGATCATTTCTTCGTTCCAGAGTATTTATGGCTGCAAGCTTAATGGCTACTGGCACTATTTATAGTCTTGCAGTTCTAGTTTTGGCGAATATATATCATGTGCTAGGTTTGATAACCAAAGCCTCCAATCCGATAGGACGCATGGACTTTCACTTTCCCATGCATTACGTCCATGGCTAG
Protein sequence
MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVLVLANIYHVLGLITKASNPIGRMDFHFPMHYVHG
Homology
BLAST of MELO3C034677 vs. NCBI nr
Match:
ADN34118.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 164.1 bits (414), Expect = 5.8e-37
Identity = 82/93 (88.17%), Postives = 84/93 (90.32%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAELRI++DLKDETYLA FL CWLC FVFPQKGSFLR RVF AASLMA GTIYSLAVL
Sbjct: 39 MLFAELRIKDDLKDETYLAAFLSCWLCFFVFPQKGSFLRPRVFRAASLMAAGTIYSLAVL 98
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPI MDFHFPMHYVHG
Sbjct: 99 VLANIYHGLGLITKASNPIRCMDFHFPMHYVHG 131
BLAST of MELO3C034677 vs. NCBI nr
Match:
TYK20969.1 (hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 163.3 bits (412), Expect = 1.0e-36
Identity = 82/93 (88.17%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAEL IR+DLKDETYLA FL CWLCLFVFPQKGSFLR VF ASLMA GTIYSLAV
Sbjct: 267 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVASLMAAGTIYSLAVP 326
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPIGRMDFHFPMHYVHG
Sbjct: 327 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 359
BLAST of MELO3C034677 vs. NCBI nr
Match:
KAA0052363.1 (hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa])
HSP 1 Score: 163.3 bits (412), Expect = 1.0e-36
Identity = 82/93 (88.17%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAEL IR+DLKDETYLA FL CWLCLFVFPQKGSFLR VF ASLMA GTIYSLAV
Sbjct: 267 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVASLMAAGTIYSLAVP 326
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPIGRMDFHFPMHYVHG
Sbjct: 327 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 359
BLAST of MELO3C034677 vs. NCBI nr
Match:
KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 82/93 (88.17%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAEL IR+DLKDETYLA FL CWLCLFVFPQKGSFLR VF ASLMA GTIYSLAV
Sbjct: 306 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRLGVFRVASLMAAGTIYSLAVP 365
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPIGRMDFHFPMHYVHG
Sbjct: 366 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 398
BLAST of MELO3C034677 vs. NCBI nr
Match:
KAA0031751.1 (hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 161.8 bits (408), Expect = 2.9e-36
Identity = 81/93 (87.10%), Postives = 82/93 (88.17%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAEL IR+DLKDETYLA FL CWLCLFVFPQKGSFLR VF SLMA GTIYSLAV
Sbjct: 1 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVVSLMAAGTIYSLAVP 60
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPIGRMDFHFPMHYVHG
Sbjct: 61 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 93
BLAST of MELO3C034677 vs. ExPASy TrEMBL
Match:
E5GCB9 (PMD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37
Identity = 82/93 (88.17%), Postives = 84/93 (90.32%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAELRI++DLKDETYLA FL CWLC FVFPQKGSFLR RVF AASLMA GTIYSLAVL
Sbjct: 39 MLFAELRIKDDLKDETYLAAFLSCWLCFFVFPQKGSFLRPRVFRAASLMAAGTIYSLAVL 98
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPI MDFHFPMHYVHG
Sbjct: 99 VLANIYHGLGLITKASNPIRCMDFHFPMHYVHG 131
BLAST of MELO3C034677 vs. ExPASy TrEMBL
Match:
A0A5A7U8X8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002060 PE=4 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 4.8e-37
Identity = 82/93 (88.17%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAEL IR+DLKDETYLA FL CWLCLFVFPQKGSFLR VF ASLMA GTIYSLAV
Sbjct: 267 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVASLMAAGTIYSLAVP 326
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPIGRMDFHFPMHYVHG
Sbjct: 327 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 359
BLAST of MELO3C034677 vs. ExPASy TrEMBL
Match:
A0A5D3DCE5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18270G00010 PE=4 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 4.8e-37
Identity = 82/93 (88.17%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAEL IR+DLKDETYLA FL CWLCLFVFPQKGSFLR VF ASLMA GTIYSLAV
Sbjct: 267 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVASLMAAGTIYSLAVP 326
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPIGRMDFHFPMHYVHG
Sbjct: 327 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 359
BLAST of MELO3C034677 vs. ExPASy TrEMBL
Match:
A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)
HSP 1 Score: 162.9 bits (411), Expect = 6.3e-37
Identity = 82/93 (88.17%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAEL IR+DLKDETYLA FL CWLCLFVFPQKGSFLR VF ASLMA GTIYSLAV
Sbjct: 306 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRLGVFRVASLMAAGTIYSLAVP 365
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPIGRMDFHFPMHYVHG
Sbjct: 366 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 398
BLAST of MELO3C034677 vs. ExPASy TrEMBL
Match:
A0A5A7SQC9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00140 PE=4 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36
Identity = 81/93 (87.10%), Postives = 82/93 (88.17%), Query Frame = 0
Query: 1 MLFAELRIRNDLKDETYLATFLFCWLCLFVFPQKGSFLRSRVFMAASLMATGTIYSLAVL 60
MLFAEL IR+DLKDETYLA FL CWLCLFVFPQKGSFLR VF SLMA GTIYSLAV
Sbjct: 1 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVVSLMAAGTIYSLAVP 60
Query: 61 VLANIYHVLGLITKASNPIGRMDFHFPMHYVHG 94
VLANIYH LGLITKASNPIGRMDFHFPMHYVHG
Sbjct: 61 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 93
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| ADN34118.1 | 5.8e-37 | 88.17 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
| TYK20969.1 | 1.0e-36 | 88.17 | hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa] | [more] |
| KAA0052363.1 | 1.0e-36 | 88.17 | hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa] | [more] |
| KAA0053466.1 | 1.3e-36 | 88.17 | hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa] | [more] |
| KAA0031751.1 | 2.9e-36 | 87.10 | hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| E5GCB9 | 2.8e-37 | 88.17 | PMD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
| A0A5A7U8X8 | 4.8e-37 | 88.17 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5D3DCE5 | 4.8e-37 | 88.17 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
| A0A5A7UGW6 | 6.3e-37 | 88.17 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5A7SQC9 | 1.4e-36 | 87.10 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
