Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTTTCTTTTCTTTCTCTGGATGTCTGATTTCTTTGATGTACTTGTTTTACTGATTTAGTATTATTTTTATCTGAGTTCATTTTAATGCAAATGTTTGAGCCGTATTACATTTCTTACCTTACAGAAAAATTTGGAGGAAATCTGGCATATTAATACATATATGATCCCGTAACTCTTGTCTTTACATATTTACTTGACTGGTATCCGTGAATATTTCATTCAGTTGGAGACTGTATTTCATTTGACTTTCATTTTTTAAGTTCTTAAGCCTCTAGGCCTCCAACTTGTGTTGTTTTGATTGTTGAATGTACTTCTTTTAGAAACTACAATTAAAATGTTGTTTCAGTTTTTCGAGTGTTACCAACGATGTTGATATGCTTTTTTTTATGACAATTTTGTACTATCAAGAGAGAGATTGGGAGGAAGGTAGTCAAACAACATTTGAGTGTGCATAGTTTCAAATGTAGTCAATTAGGATTACAATATGAAGGATTTTATTTTTGGATCATTGAAGTAACTACCTGTATTTGCATTGCACCTTATTACCTTGTTATTGTAAGAGTAACTGGTATTCACATATGTAGATGAGTCTTCATTTAATGCAGTTGAAAATTTAAAATCAATACAATAATTTTTTTATTGTATTAGTCTGTAATATTAGTTCTTGAGATGAAACTTTGCTTTTTGAGAAAACTCCTGGACTTTTGGGCTACTATTAGAAGGTTGTTGGTTCTGTTGCTAGTGCTTAAGTAATTGGGATTCTAATATTTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGGTAGTAATATCCATCCACATTATTTCTTTTTTTTGGATGATGTTTTTATGTGCTCAATGAGCTCAAATGGTTTAATAATTTGTTTTGATTCTGATCCACCTTAAGAACTGGATAAGGTAGCTTAGATGGCTCAATTATTATTATTATTACTGTTATTGTTGATGTTGTTGCTGTTATGATTATTATTATTATTATATTTAACAGGAAACCAAATTTTCCTTAAATGGCTAGTACTACTATTAATCGCGGGTTACTTTTGCAATTAGGTTGTTCAGAAGTAGTGCAAACTTGCCAATTATCATTGGAGTAACGCTTACTTGTCCTCTTTATCACTTGTCTGGGAGGATTAGTGGGTGGGGCAGAATCCCCCTTTGTTCTTTGTTTCTACGTCTTTATCACTCGTCTTCTTTTAAAAACCGCCTGATTTCGAACCTTTTGGTTGGGTCTGAGAATTCTGTGCCCTTCTCTTTCGTGTTTCATGGCTATTTATCTAATAGAGAAACGACAGAGGTGGCTCTTTCTTTCTTTGCTTTAGCAGTGTAGCTTTAGGGAGGGGAGGAGGGATACTCACATTTGGAGTCCTAATCCGAGTTAAGGTTTCTTCTCTAATGAGGAATAGTAGCATAGTCGGAAGTGTTTTTCTTCTCTAATGAGGAAGGGTGTGACTTGTATTCCTGTTTTTGGTATGGTTCTTGTGACAGGTGTTTGGCTGTATTTTGTTTAGTTCAAGCTTTGCAAATTTTCATTGGAGGTCTTTCCCCAAATAATAAACTAGAACTATAGTCACTTAAAGTGTAAGCAGCCAGAGATTCTGCATACAGCATATATAGTGTCAGAGGGTCCATGATGACTGCCAAAAAAGTTCTTTGATGTTTTAGCCGACTGGCTCCTTCTTTTGGATCTGAAAGTCCGCCATGAAAGTACAGGACATAAAGAAGTGGTTTTGATTTTCGCCAACTGTTTCTGAAAATATAGCACCAATTTGGAGAGGTGAACTAGTAGGGAAATCTTTTTTGAAGGCAATCCCCGTGTCTACTCCATTTTGGAAGCTCTCATAGAAAAAACTTGGAACTTGTGGGAAGGATCCTTTCCCAATTAAAAAAAAAAAAAAACAGAGAGAGATCTTCTCTTTCTTGGATTATGAGTGAGGTCTAGATTGAGAGATTTTACCTTGCAGTTTGATGGAGGTCCAAAATCCATTTCCATTCTTCCGCTCTCTCATTTAGCGCAGTTTGGGATAACAAATGCTCAAGGGATGCCCATTCTGTGATTTTATCCTCCAGATTTCTTCTAATGTCAAGCAACTAAGAATTAGAATCCAGTTGCCTCAAAATCTTTTTCAATTGTTTAGGCGCCATTTTGGCATTTTGAAGAGAGATGGGTAATAAATTGATAAACTAGACAAAGTGAGGCGCCTCCTTGGGAAATGTAAAAATGTTTCCAGTTGTGAAGTTTTTTATGAACTCTCTCAATAAAGGCTCCAAAATGAAATGGTCTTTGGTTTACCCCCCAAGTTGGAGGGCTTGATAAGCAACAAACTACAACCCACCCTAGTTGTCTATTTGTTCAATTCTCCATTTATTTAGTTGACCCCTGACAACTTACTTTTTGTAAGATTAATGTTTAGACCAGAAGCATTCGCATTTAATGAGATGAGCATGAAGATTCTTGATTACTATTGAATCAAAAGAGGAGAAAATCAGGGTAATATGTGCAAACGGTAACTGATTTATGCCAAGTGAAGATTTACCAACATTTATAGATTTTGTAAATCAAAAGCTCCATAGTTCAGCTCCTACTTTGACAATCTACAGCAATAGTGAAAATGAATTGTGATGATGGGTCACATTGCCTAAGGGCCCCTTGTGGGGATGACCTTGACCTTGCCTTTGGCCTATTAACAATAGTAGAGGGGTTGGCGCTTGAAATACACTCATGAATCCACTCCTTTTATCAAAACTTTTTCAGGATGAGACAAATATAGGTCTCATTGAAGGCTGCATTATCTGACTTGAGTGTACCAAACGTTCTTGAAGAATTCAGTGGTGAATCCATGAGGAACTCAATGCGTTAACTGTTAAATGGTCTCTAAAGAGTTTGCTTGATCACCATAGATGCCTGTCAATCTAGATTTATGGGGATGAAGCAGGGGTCTCTATTCTTCGTGTAAAAATCAGGGAAGAATTTCAAAAACTCTCTCCACTGTCTTAGTCATTTAGAAGGCTTAAACACCCTCTCTTCCTCTTACGAACTTCTAAAATTTCAAGAAAACATCCCAACTTTTATTGGATAACTCAGATTACACCAAATAAGTGGCACTTCAAGTCATGTAAAAAAAAAAATTAGCCACTAACTTGTAGTAAAACAGATATCAAGTATCAATATAAAAATAATGCGAACAATTTAGTAATATCTTACCAATTACTACGATCTTTTTCGAAATTTATCCAACTCTAAGCTTTTTCAAAATTTATCAGACTCTAATTCACTTTATATTAGAGCTGATATTTTATAAATTACACTTATTAGAAAGTACTATAAAAGTTGAAGTAATTATAAAATTTTCCAACTTTTAAGTAAGTTACCAACTAATTAGTAAAACTCCCCTAATGACATTCTTAGACGTTATAGTCTATTGACTTGTTCCACTTATTTACTTTGTTAATAGAAATGCAATTTGTTTGTGGTTTGCAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAAATTGCCGCAGCCACTCGGTCCAAGGAAAGTCTCAATGTGACTCACATGTATTTACATTTTGTTGCCTTAGTATAAATGAAACATTCTTTTCAAATATAGAAAGTAGAAAGGAAAATGTACTTATTTAATTCATTAATCATTATTACATACATGAATAATAATTAATAGATTGTATTGGATATAAAAAATATAACCGAACTTAAAAAATTTAAT
mRNA sequence
AGGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAAATTGCCGCAGCCACTCGGTCCAAGGAAAGTCTCAATGTGACTCACATGTATTTACATTTTGTTGCCTTAGTATAAATGAAACATTCTTTTCAAATATAGAAAGTAGAAAGGAAAATGTACTTATTTAATTCATTAATCATTATTACATACATGAATAATAATTAATAGATTGTATTGGATATAAAAAATATAACCGAACTTAAAAAATTTAAT
Coding sequence (CDS)
ATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAA
Protein sequence
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE
Homology
BLAST of MELO3C030975 vs. NCBI nr
Match:
XP_008443366.1 (PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_016899685.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_016899686.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo])
HSP 1 Score: 110.5 bits (275), Expect = 4.7e-21
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE 58
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE 77
BLAST of MELO3C030975 vs. NCBI nr
Match:
KAE8651208.1 (hypothetical protein Csa_001569 [Cucumis sativus])
HSP 1 Score: 104.0 bits (258), Expect = 4.4e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNN 55
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNE+DRNSSGSARNGDNN
Sbjct: 136 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEDDRNSSGSARNGDNN 189
BLAST of MELO3C030975 vs. NCBI nr
Match:
XP_031739188.1 (uncharacterized protein LOC116402896 [Cucumis sativus] >XP_031739189.1 uncharacterized protein LOC116402896 [Cucumis sativus])
HSP 1 Score: 104.0 bits (258), Expect = 4.4e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNN 55
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNE+DRNSSGSARNGDNN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEDDRNSSGSARNGDNN 74
BLAST of MELO3C030975 vs. NCBI nr
Match:
XP_038903424.1 (uncharacterized protein LOC120090017 [Benincasa hispida])
HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNN 56
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK E+D NSSGS RNGDNNN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKREDDHNSSGSVRNGDNNN 75
BLAST of MELO3C030975 vs. NCBI nr
Match:
XP_022934797.1 (uncharacterized protein LOC111441864 [Cucurbita moschata] >KAG6580942.1 hypothetical protein SDJN03_20944, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 83.2 bits (204), Expect = 8.0e-13
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARN 51
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+ R+S G RN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRDSCGGERN 70
BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match:
A0A1S3B7U3 (uncharacterized protein LOC103486972 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486972 PE=4 SV=1)
HSP 1 Score: 110.5 bits (275), Expect = 2.3e-21
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE 58
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE 77
BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match:
A0A0A0LF72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824790 PE=4 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNN 55
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNE+DRNSSGSARNGDNN
Sbjct: 107 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEDDRNSSGSARNGDNN 160
BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match:
A0A6J1F3T3 (uncharacterized protein LOC111441864 OS=Cucurbita moschata OX=3662 GN=LOC111441864 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 3.9e-13
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARN 51
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+ R+S G RN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRDSCGGERN 70
BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match:
A0A6J1J8Z6 (uncharacterized protein LOC111482368 OS=Cucurbita maxima OX=3661 GN=LOC111482368 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 7.3e-12
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARN 51
MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+ +S RN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGHDSCSGERN 70
BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match:
A0A2I4EDB2 (uncharacterized protein LOC108988545 isoform X2 OS=Juglans regia OX=51240 GN=LOC108988545 PE=4 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = 0
Query: 1 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGD 53
MD+YRSMSHELHKLQVEEEMLMRKFYEIMS+HGL KKN + N A NGD
Sbjct: 21 MDSYRSMSHELHKLQVEEEMLMRKFYEIMSSHGLNKKNHDRSNDPDYAENGD 72
BLAST of MELO3C030975 vs. TAIR 10
Match:
AT4G37608.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 42.4 bits (98), Expect = 1.5e-04
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query: 2 DAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEED 42
+A ++M EL KL+VE E +MRK YE+M+ H L KK E+
Sbjct: 22 EAQKNMLQELQKLEVEHETMMRKLYELMNTHSLNKKKMEE 61
BLAST of MELO3C030975 vs. TAIR 10
Match:
AT2G23040.1 (unknown protein; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 40.4 bits (93), Expect = 5.6e-04
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
Query: 7 MSHELHKLQVEEEMLMRKFYEIMSAHGLVKK 38
M+ EL L+VEEEM+MRKFYE+MS L KK
Sbjct: 1 MTQELQTLEVEEEMMMRKFYELMSRQRLNKK 31
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008443366.1 | 4.7e-21 | 100.00 | PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_01... | [more] |
| KAE8651208.1 | 4.4e-19 | 98.15 | hypothetical protein Csa_001569 [Cucumis sativus] | [more] |
| XP_031739188.1 | 4.4e-19 | 98.15 | uncharacterized protein LOC116402896 [Cucumis sativus] >XP_031739189.1 uncharact... | [more] |
| XP_038903424.1 | 2.4e-17 | 90.91 | uncharacterized protein LOC120090017 [Benincasa hispida] | [more] |
| XP_022934797.1 | 8.0e-13 | 84.00 | uncharacterized protein LOC111441864 [Cucurbita moschata] >KAG6580942.1 hypothet... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3B7U3 | 2.3e-21 | 100.00 | uncharacterized protein LOC103486972 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A0A0LF72 | 2.1e-19 | 98.15 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824790 PE=4 SV=1 | [more] |
| A0A6J1F3T3 | 3.9e-13 | 84.00 | uncharacterized protein LOC111441864 OS=Cucurbita moschata OX=3662 GN=LOC1114418... | [more] |
| A0A6J1J8Z6 | 7.3e-12 | 80.00 | uncharacterized protein LOC111482368 OS=Cucurbita maxima OX=3661 GN=LOC111482368... | [more] |
| A0A2I4EDB2 | 1.3e-11 | 76.92 | uncharacterized protein LOC108988545 isoform X2 OS=Juglans regia OX=51240 GN=LOC... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G37608.1 | 1.5e-04 | 50.00 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
| AT2G23040.1 | 5.6e-04 | 64.52 | unknown protein; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacter... | [more] |
