MELO3C030975.1 (mRNA) Melon (DHL92) v4
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTTTCTTTTCTTTCTCTGGATGTCTGATTTCTTTGATGTACTTGTTTTACTGATTTAGTATTATTTTTATCTGAGTTCATTTTAATGCAAATGTTTGAGCCGTATTACATTTCTTACCTTACAGAAAAATTTGGAGGAAATCTGGCATATTAATACATATATGATCCCGTAACTCTTGTCTTTACATATTTACTTGACTGGTATCCGTGAATATTTCATTCAGTTGGAGACTGTATTTCATTTGACTTTCATTTTTTAAGTTCTTAAGCCTCTAGGCCTCCAACTTGTGTTGTTTTGATTGTTGAATGTACTTCTTTTAGAAACTACAATTAAAATGTTGTTTCAGTTTTTCGAGTGTTACCAACGATGTTGATATGCTTTTTTTTATGACAATTTTGTACTATCAAGAGAGAGATTGGGAGGAAGGTAGTCAAACAACATTTGAGTGTGCATAGTTTCAAATGTAGTCAATTAGGATTACAATATGAAGGATTTTATTTTTGGATCATTGAAGTAACTACCTGTATTTGCATTGCACCTTATTACCTTGTTATTGTAAGAGTAACTGGTATTCACATATGTAGATGAGTCTTCATTTAATGCAGTTGAAAATTTAAAATCAATACAATAATTTTTTTATTGTATTAGTCTGTAATATTAGTTCTTGAGATGAAACTTTGCTTTTTGAGAAAACTCCTGGACTTTTGGGCTACTATTAGAAGGTTGTTGGTTCTGTTGCTAGTGCTTAAGTAATTGGGATTCTAATATTTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGGTAGTAATATCCATCCACATTATTTCTTTTTTTTGGATGATGTTTTTATGTGCTCAATGAGCTCAAATGGTTTAATAATTTGTTTTGATTCTGATCCACCTTAAGAACTGGATAAGGTAGCTTAGATGGCTCAATTATTATTATTATTACTGTTATTGTTGATGTTGTTGCTGTTATGATTATTATTATTATTATATTTAACAGGAAACCAAATTTTCCTTAAATGGCTAGTACTACTATTAATCGCGGGTTACTTTTGCAATTAGGTTGTTCAGAAGTAGTGCAAACTTGCCAATTATCATTGGAGTAACGCTTACTTGTCCTCTTTATCACTTGTCTGGGAGGATTAGTGGGTGGGGCAGAATCCCCCTTTGTTCTTTGTTTCTACGTCTTTATCACTCGTCTTCTTTTAAAAACCGCCTGATTTCGAACCTTTTGGTTGGGTCTGAGAATTCTGTGCCCTTCTCTTTCGTGTTTCATGGCTATTTATCTAATAGAGAAACGACAGAGGTGGCTCTTTCTTTCTTTGCTTTAGCAGTGTAGCTTTAGGGAGGGGAGGAGGGATACTCACATTTGGAGTCCTAATCCGAGTTAAGGTTTCTTCTCTAATGAGGAATAGTAGCATAGTCGGAAGTGTTTTTCTTCTCTAATGAGGAAGGGTGTGACTTGTATTCCTGTTTTTGGTATGGTTCTTGTGACAGGTGTTTGGCTGTATTTTGTTTAGTTCAAGCTTTGCAAATTTTCATTGGAGGTCTTTCCCCAAATAATAAACTAGAACTATAGTCACTTAAAGTGTAAGCAGCCAGAGATTCTGCATACAGCATATATAGTGTCAGAGGGTCCATGATGACTGCCAAAAAAGTTCTTTGATGTTTTAGCCGACTGGCTCCTTCTTTTGGATCTGAAAGTCCGCCATGAAAGTACAGGACATAAAGAAGTGGTTTTGATTTTCGCCAACTGTTTCTGAAAATATAGCACCAATTTGGAGAGGTGAACTAGTAGGGAAATCTTTTTTGAAGGCAATCCCCGTGTCTACTCCATTTTGGAAGCTCTCATAGAAAAAACTTGGAACTTGTGGGAAGGATCCTTTCCCAATTAAAAAAAAAAAAAAACAGAGAGAGATCTTCTCTTTCTTGGATTATGAGTGAGGTCTAGATTGAGAGATTTTACCTTGCAGTTTGATGGAGGTCCAAAATCCATTTCCATTCTTCCGCTCTCTCATTTAGCGCAGTTTGGGATAACAAATGCTCAAGGGATGCCCATTCTGTGATTTTATCCTCCAGATTTCTTCTAATGTCAAGCAACTAAGAATTAGAATCCAGTTGCCTCAAAATCTTTTTCAATTGTTTAGGCGCCATTTTGGCATTTTGAAGAGAGATGGGTAATAAATTGATAAACTAGACAAAGTGAGGCGCCTCCTTGGGAAATGTAAAAATGTTTCCAGTTGTGAAGTTTTTTATGAACTCTCTCAATAAAGGCTCCAAAATGAAATGGTCTTTGGTTTACCCCCCAAGTTGGAGGGCTTGATAAGCAACAAACTACAACCCACCCTAGTTGTCTATTTGTTCAATTCTCCATTTATTTAGTTGACCCCTGACAACTTACTTTTTGTAAGATTAATGTTTAGACCAGAAGCATTCGCATTTAATGAGATGAGCATGAAGATTCTTGATTACTATTGAATCAAAAGAGGAGAAAATCAGGGTAATATGTGCAAACGGTAACTGATTTATGCCAAGTGAAGATTTACCAACATTTATAGATTTTGTAAATCAAAAGCTCCATAGTTCAGCTCCTACTTTGACAATCTACAGCAATAGTGAAAATGAATTGTGATGATGGGTCACATTGCCTAAGGGCCCCTTGTGGGGATGACCTTGACCTTGCCTTTGGCCTATTAACAATAGTAGAGGGGTTGGCGCTTGAAATACACTCATGAATCCACTCCTTTTATCAAAACTTTTTCAGGATGAGACAAATATAGGTCTCATTGAAGGCTGCATTATCTGACTTGAGTGTACCAAACGTTCTTGAAGAATTCAGTGGTGAATCCATGAGGAACTCAATGCGTTAACTGTTAAATGGTCTCTAAAGAGTTTGCTTGATCACCATAGATGCCTGTCAATCTAGATTTATGGGGATGAAGCAGGGGTCTCTATTCTTCGTGTAAAAATCAGGGAAGAATTTCAAAAACTCTCTCCACTGTCTTAGTCATTTAGAAGGCTTAAACACCCTCTCTTCCTCTTACGAACTTCTAAAATTTCAAGAAAACATCCCAACTTTTATTGGATAACTCAGATTACACCAAATAAGTGGCACTTCAAGTCATGTAAAAAAAAAAATTAGCCACTAACTTGTAGTAAAACAGATATCAAGTATCAATATAAAAATAATGCGAACAATTTAGTAATATCTTACCAATTACTACGATCTTTTTCGAAATTTATCCAACTCTAAGCTTTTTCAAAATTTATCAGACTCTAATTCACTTTATATTAGAGCTGATATTTTATAAATTACACTTATTAGAAAGTACTATAAAAGTTGAAGTAATTATAAAATTTTCCAACTTTTAAGTAAGTTACCAACTAATTAGTAAAACTCCCCTAATGACATTCTTAGACGTTATAGTCTATTGACTTGTTCCACTTATTTACTTTGTTAATAGAAATGCAATTTGTTTGTGGTTTGCAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAAATTGCCGCAGCCACTCGGTCCAAGGAAAGTCTCAATGTGACTCACATGTATTTACATTTTGTTGCCTTAGTATAAATGAAACATTCTTTTCAAATATAGAAAGTAGAAAGGAAAATGTACTTATTTAATTCATTAATCATTATTACATACATGAATAATAATTAATAGATTGTATTGGATATAAAAAATATAACCGAACTTAAAAAATTTAATAGGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAAATTGCCGCAGCCACTCGGTCCAAGGAAAGTCTCAATGTGACTCACATGTATTTACATTTTGTTGCCTTAGTATAAATGAAACATTCTTTTCAAATATAGAAAGTAGAAAGGAAAATGTACTTATTTAATTCATTAATCATTATTACATACATGAATAATAATTAATAGATTGTATTGGATATAAAAAATATAACCGAACTTAAAAAATTTAAT ATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAA MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE Homology
BLAST of MELO3C030975.1 vs. NCBI nr
Match: XP_008443366.1 (PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_016899685.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_016899686.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo]) HSP 1 Score: 110.5 bits (275), Expect = 4.7e-21 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. NCBI nr
Match: KAE8651208.1 (hypothetical protein Csa_001569 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 4.4e-19 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. NCBI nr
Match: XP_031739188.1 (uncharacterized protein LOC116402896 [Cucumis sativus] >XP_031739189.1 uncharacterized protein LOC116402896 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 4.4e-19 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. NCBI nr
Match: XP_038903424.1 (uncharacterized protein LOC120090017 [Benincasa hispida]) HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17 Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of MELO3C030975.1 vs. NCBI nr
Match: XP_022934797.1 (uncharacterized protein LOC111441864 [Cucurbita moschata] >KAG6580942.1 hypothetical protein SDJN03_20944, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 83.2 bits (204), Expect = 8.0e-13 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. ExPASy TrEMBL
Match: A0A1S3B7U3 (uncharacterized protein LOC103486972 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486972 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.3e-21 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. ExPASy TrEMBL
Match: A0A0A0LF72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824790 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. ExPASy TrEMBL
Match: A0A6J1F3T3 (uncharacterized protein LOC111441864 OS=Cucurbita moschata OX=3662 GN=LOC111441864 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.9e-13 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. ExPASy TrEMBL
Match: A0A6J1J8Z6 (uncharacterized protein LOC111482368 OS=Cucurbita maxima OX=3661 GN=LOC111482368 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.3e-12 Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. ExPASy TrEMBL
Match: A0A2I4EDB2 (uncharacterized protein LOC108988545 isoform X2 OS=Juglans regia OX=51240 GN=LOC108988545 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11 Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = 0
BLAST of MELO3C030975.1 vs. TAIR 10
Match: AT4G37608.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 1.5e-04 Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 0
BLAST of MELO3C030975.1 vs. TAIR 10
Match: AT2G23040.1 (unknown protein; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 40.4 bits (93), Expect = 5.6e-04 Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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