MELO3C030975 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030975
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	General vesicular transport factor p115 like
Location	chr04: 27687623 .. 27691507 (+)
RNA-Seq Expression	MELO3C030975
Synteny	MELO3C030975

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTTTCTTTTCTTTCTCTGGATGTCTGATTTCTTTGATGTACTTGTTTTACTGATTTAGTATTATTTTTATCTGAGTTCATTTTAATGCAAATGTTTGAGCCGTATTACATTTCTTACCTTACAGAAAAATTTGGAGGAAATCTGGCATATTAATACATATATGATCCCGTAACTCTTGTCTTTACATATTTACTTGACTGGTATCCGTGAATATTTCATTCAGTTGGAGACTGTATTTCATTTGACTTTCATTTTTTAAGTTCTTAAGCCTCTAGGCCTCCAACTTGTGTTGTTTTGATTGTTGAATGTACTTCTTTTAGAAACTACAATTAAAATGTTGTTTCAGTTTTTCGAGTGTTACCAACGATGTTGATATGCTTTTTTTTATGACAATTTTGTACTATCAAGAGAGAGATTGGGAGGAAGGTAGTCAAACAACATTTGAGTGTGCATAGTTTCAAATGTAGTCAATTAGGATTACAATATGAAGGATTTTATTTTTGGATCATTGAAGTAACTACCTGTATTTGCATTGCACCTTATTACCTTGTTATTGTAAGAGTAACTGGTATTCACATATGTAGATGAGTCTTCATTTAATGCAGTTGAAAATTTAAAATCAATACAATAATTTTTTTATTGTATTAGTCTGTAATATTAGTTCTTGAGATGAAACTTTGCTTTTTGAGAAAACTCCTGGACTTTTGGGCTACTATTAGAAGGTTGTTGGTTCTGTTGCTAGTGCTTAAGTAATTGGGATTCTAATATTTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGGTAGTAATATCCATCCACATTATTTCTTTTTTTTGGATGATGTTTTTATGTGCTCAATGAGCTCAAATGGTTTAATAATTTGTTTTGATTCTGATCCACCTTAAGAACTGGATAAGGTAGCTTAGATGGCTCAATTATTATTATTATTACTGTTATTGTTGATGTTGTTGCTGTTATGATTATTATTATTATTATATTTAACAGGAAACCAAATTTTCCTTAAATGGCTAGTACTACTATTAATCGCGGGTTACTTTTGCAATTAGGTTGTTCAGAAGTAGTGCAAACTTGCCAATTATCATTGGAGTAACGCTTACTTGTCCTCTTTATCACTTGTCTGGGAGGATTAGTGGGTGGGGCAGAATCCCCCTTTGTTCTTTGTTTCTACGTCTTTATCACTCGTCTTCTTTTAAAAACCGCCTGATTTCGAACCTTTTGGTTGGGTCTGAGAATTCTGTGCCCTTCTCTTTCGTGTTTCATGGCTATTTATCTAATAGAGAAACGACAGAGGTGGCTCTTTCTTTCTTTGCTTTAGCAGTGTAGCTTTAGGGAGGGGAGGAGGGATACTCACATTTGGAGTCCTAATCCGAGTTAAGGTTTCTTCTCTAATGAGGAATAGTAGCATAGTCGGAAGTGTTTTTCTTCTCTAATGAGGAAGGGTGTGACTTGTATTCCTGTTTTTGGTATGGTTCTTGTGACAGGTGTTTGGCTGTATTTTGTTTAGTTCAAGCTTTGCAAATTTTCATTGGAGGTCTTTCCCCAAATAATAAACTAGAACTATAGTCACTTAAAGTGTAAGCAGCCAGAGATTCTGCATACAGCATATATAGTGTCAGAGGGTCCATGATGACTGCCAAAAAAGTTCTTTGATGTTTTAGCCGACTGGCTCCTTCTTTTGGATCTGAAAGTCCGCCATGAAAGTACAGGACATAAAGAAGTGGTTTTGATTTTCGCCAACTGTTTCTGAAAATATAGCACCAATTTGGAGAGGTGAACTAGTAGGGAAATCTTTTTTGAAGGCAATCCCCGTGTCTACTCCATTTTGGAAGCTCTCATAGAAAAAACTTGGAACTTGTGGGAAGGATCCTTTCCCAATTAAAAAAAAAAAAAAACAGAGAGAGATCTTCTCTTTCTTGGATTATGAGTGAGGTCTAGATTGAGAGATTTTACCTTGCAGTTTGATGGAGGTCCAAAATCCATTTCCATTCTTCCGCTCTCTCATTTAGCGCAGTTTGGGATAACAAATGCTCAAGGGATGCCCATTCTGTGATTTTATCCTCCAGATTTCTTCTAATGTCAAGCAACTAAGAATTAGAATCCAGTTGCCTCAAAATCTTTTTCAATTGTTTAGGCGCCATTTTGGCATTTTGAAGAGAGATGGGTAATAAATTGATAAACTAGACAAAGTGAGGCGCCTCCTTGGGAAATGTAAAAATGTTTCCAGTTGTGAAGTTTTTTATGAACTCTCTCAATAAAGGCTCCAAAATGAAATGGTCTTTGGTTTACCCCCCAAGTTGGAGGGCTTGATAAGCAACAAACTACAACCCACCCTAGTTGTCTATTTGTTCAATTCTCCATTTATTTAGTTGACCCCTGACAACTTACTTTTTGTAAGATTAATGTTTAGACCAGAAGCATTCGCATTTAATGAGATGAGCATGAAGATTCTTGATTACTATTGAATCAAAAGAGGAGAAAATCAGGGTAATATGTGCAAACGGTAACTGATTTATGCCAAGTGAAGATTTACCAACATTTATAGATTTTGTAAATCAAAAGCTCCATAGTTCAGCTCCTACTTTGACAATCTACAGCAATAGTGAAAATGAATTGTGATGATGGGTCACATTGCCTAAGGGCCCCTTGTGGGGATGACCTTGACCTTGCCTTTGGCCTATTAACAATAGTAGAGGGGTTGGCGCTTGAAATACACTCATGAATCCACTCCTTTTATCAAAACTTTTTCAGGATGAGACAAATATAGGTCTCATTGAAGGCTGCATTATCTGACTTGAGTGTACCAAACGTTCTTGAAGAATTCAGTGGTGAATCCATGAGGAACTCAATGCGTTAACTGTTAAATGGTCTCTAAAGAGTTTGCTTGATCACCATAGATGCCTGTCAATCTAGATTTATGGGGATGAAGCAGGGGTCTCTATTCTTCGTGTAAAAATCAGGGAAGAATTTCAAAAACTCTCTCCACTGTCTTAGTCATTTAGAAGGCTTAAACACCCTCTCTTCCTCTTACGAACTTCTAAAATTTCAAGAAAACATCCCAACTTTTATTGGATAACTCAGATTACACCAAATAAGTGGCACTTCAAGTCATGTAAAAAAAAAAATTAGCCACTAACTTGTAGTAAAACAGATATCAAGTATCAATATAAAAATAATGCGAACAATTTAGTAATATCTTACCAATTACTACGATCTTTTTCGAAATTTATCCAACTCTAAGCTTTTTCAAAATTTATCAGACTCTAATTCACTTTATATTAGAGCTGATATTTTATAAATTACACTTATTAGAAAGTACTATAAAAGTTGAAGTAATTATAAAATTTTCCAACTTTTAAGTAAGTTACCAACTAATTAGTAAAACTCCCCTAATGACATTCTTAGACGTTATAGTCTATTGACTTGTTCCACTTATTTACTTTGTTAATAGAAATGCAATTTGTTTGTGGTTTGCAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAAATTGCCGCAGCCACTCGGTCCAAGGAAAGTCTCAATGTGACTCACATGTATTTACATTTTGTTGCCTTAGTATAAATGAAACATTCTTTTCAAATATAGAAAGTAGAAAGGAAAATGTACTTATTTAATTCATTAATCATTATTACATACATGAATAATAATTAATAGATTGTATTGGATATAAAAAATATAACCGAACTTAAAAAATTTAAT

mRNA sequence

AGGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAAATTGCCGCAGCCACTCGGTCCAAGGAAAGTCTCAATGTGACTCACATGTATTTACATTTTGTTGCCTTAGTATAAATGAAACATTCTTTTCAAATATAGAAAGTAGAAAGGAAAATGTACTTATTTAATTCATTAATCATTATTACATACATGAATAATAATTAATAGATTGTATTGGATATAAAAAATATAACCGAACTTAAAAAATTTAAT

Coding sequence (CDS)

ATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTCGAAGAAGAAATGCTGATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAGTAAAGAAGAATGAAGAGGATCGTAATAGTTCTGGCAGCGCAAGGAATGGCGATAACAACAACATCGAATAA

Protein sequence

MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE

Homology

[Close]

BLAST of MELO3C030975 vs. NCBI nr
Match: XP_008443366.1 (PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_016899685.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_016899686.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo])

HSP 1 Score: 110.5 bits (275), Expect = 4.7e-21
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE 58
          MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE 77

[Close]

BLAST of MELO3C030975 vs. NCBI nr
Match: KAE8651208.1 (hypothetical protein Csa_001569 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 4.4e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNN 55
           MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNE+DRNSSGSARNGDNN
Sbjct: 136 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEDDRNSSGSARNGDNN 189

[Close]

BLAST of MELO3C030975 vs. NCBI nr
Match: XP_031739188.1 (uncharacterized protein LOC116402896 [Cucumis sativus] >XP_031739189.1 uncharacterized protein LOC116402896 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 4.4e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNN 55
          MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNE+DRNSSGSARNGDNN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEDDRNSSGSARNGDNN 74

[Close]

BLAST of MELO3C030975 vs. NCBI nr
Match: XP_038903424.1 (uncharacterized protein LOC120090017 [Benincasa hispida])

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1  MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNN 56
          MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK E+D NSSGS RNGDNNN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKREDDHNSSGSVRNGDNNN 75

[Close]

BLAST of MELO3C030975 vs. NCBI nr
Match: XP_022934797.1 (uncharacterized protein LOC111441864 [Cucurbita moschata] >KAG6580942.1 hypothetical protein SDJN03_20944, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.2 bits (204), Expect = 8.0e-13
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1  MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARN 51
          MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+ R+S G  RN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRDSCGGERN 70

[Close]

BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match: A0A1S3B7U3 (uncharacterized protein LOC103486972 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486972 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-21
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE 58
          MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNNNIE 77

[Close]

BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match: A0A0A0LF72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824790 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGDNN 55
           MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNE+DRNSSGSARNGDNN
Sbjct: 107 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEDDRNSSGSARNGDNN 160

[Close]

BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match: A0A6J1F3T3 (uncharacterized protein LOC111441864 OS=Cucurbita moschata OX=3662 GN=LOC111441864 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-13
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1  MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARN 51
          MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+ R+S G  RN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRDSCGGERN 70

[Close]

BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match: A0A6J1J8Z6 (uncharacterized protein LOC111482368 OS=Cucurbita maxima OX=3661 GN=LOC111482368 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.3e-12
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 1  MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARN 51
          MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+  +S    RN
Sbjct: 21 MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGHDSCSGERN 70

[Close]

BLAST of MELO3C030975 vs. ExPASy TrEMBL
Match: A0A2I4EDB2 (uncharacterized protein LOC108988545 isoform X2 OS=Juglans regia OX=51240 GN=LOC108988545 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 1  MDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEEDRNSSGSARNGD 53
          MD+YRSMSHELHKLQVEEEMLMRKFYEIMS+HGL KKN +  N    A NGD
Sbjct: 21 MDSYRSMSHELHKLQVEEEMLMRKFYEIMSSHGLNKKNHDRSNDPDYAENGD 72

[Close]

BLAST of MELO3C030975 vs. TAIR 10
Match: AT4G37608.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 1.5e-04
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 2  DAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEED 42
          +A ++M  EL KL+VE E +MRK YE+M+ H L KK  E+
Sbjct: 22 EAQKNMLQELQKLEVEHETMMRKLYELMNTHSLNKKKMEE 61

[Close]

BLAST of MELO3C030975 vs. TAIR 10
Match: AT2G23040.1 (unknown protein; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 40.4 bits (93), Expect = 5.6e-04
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 7  MSHELHKLQVEEEMLMRKFYEIMSAHGLVKK 38
          M+ EL  L+VEEEM+MRKFYE+MS   L KK
Sbjct: 1  MTQELQTLEVEEEMMMRKFYELMSRQRLNKK 31

The following BLAST results are available for this feature:

BLAST of MELO3C030975 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443366.1	4.7e-21	100.00	PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_01...	[more]
KAE8651208.1	4.4e-19	98.15	hypothetical protein Csa_001569 [Cucumis sativus]	[more]
XP_031739188.1	4.4e-19	98.15	uncharacterized protein LOC116402896 [Cucumis sativus] >XP_031739189.1 uncharact...	[more]
XP_038903424.1	2.4e-17	90.91	uncharacterized protein LOC120090017 [Benincasa hispida]	[more]
XP_022934797.1	8.0e-13	84.00	uncharacterized protein LOC111441864 [Cucurbita moschata] >KAG6580942.1 hypothet...	[more]

BLAST of MELO3C030975 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C030975 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7U3	2.3e-21	100.00	uncharacterized protein LOC103486972 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LF72	2.1e-19	98.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824790 PE=4 SV=1	[more]
A0A6J1F3T3	3.9e-13	84.00	uncharacterized protein LOC111441864 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]
A0A6J1J8Z6	7.3e-12	80.00	uncharacterized protein LOC111482368 OS=Cucurbita maxima OX=3661 GN=LOC111482368...	[more]
A0A2I4EDB2	1.3e-11	76.92	uncharacterized protein LOC108988545 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

BLAST of MELO3C030975 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37608.1	1.5e-04	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G23040.1	5.6e-04	64.52	unknown protein; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacter...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..57
None	No IPR available	PANTHER	PTHR37718	BNAC03G61340D PROTEIN	coord: 1..55
None	No IPR available	PANTHER	PTHR37718:SF2	BNAC03G61340D PROTEIN	coord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030975.1	MELO3C030975.1	mRNA