Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACTGGTTGGAGGCGGAAGAAGTTATGGTTGGAGGTGGAAGAATTTATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGTGGACGAAGGCGTCGTTGGAGGCGGAAGAAGGGAGAAAATCGTGAAGAATATATTGGAGAGGGAGAAAATCACGGAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAATATTGGAATATATTTTTAAAAAA
mRNA sequence
ATGACGACTGGTTGGAGGCGGAAGAAGTTATGGTTGGAGGTGGAAGAATTTATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGTGGACGAAGGCGTCGTTGGAGGCGGAAGAAGGGAGAAAATCGTGAAGAATATATTGGAGAGGGAGAAAATCACGGAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAATATTGGAATATATTTTTAAAAAA
Coding sequence (CDS)
ATGACGACTGGTTGGAGGCGGAAGAAGTTATGGTTGGAGGTGGAAGAATTTATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGTGGACGAAGGCGTCGTTGGAGGCGGAAGAAGGGAGAAAATCGTGAAGAATATATTGGAGAGGGAGAAAATCACGGAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAATATTGGAATATATTTTTAAAAAA
Protein sequence
MTTGWRRKKLWLEVEEFMVGGGRSCGWRPKMTTGWRRKKASLEVDEGVVGGGRREKIVKNILEREKITETNGGGEIRARILFKTRVILEYIFKK
Homology
BLAST of MELO3C030710 vs. NCBI nr
Match:
KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa])
HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0
Query: 15 EEFMVGGGRSCGWRPKMTTGWRRKKASLEVDEGVVGGGRREKIVKNILEREKITE 70
EE +VGGGRSCGWRPKMTTGWR+KKASLE EG+VGGGRR + + +LE K E
Sbjct: 83 EEVVVGGGRSCGWRPKMTTGWRQKKASLEAKEGIVGGGRRRRAEEGVLENGKAEE 137
BLAST of MELO3C030710 vs. NCBI nr
Match:
TYJ97125.1 (S-antigen protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 77.0 bits (188), Expect = 9.5e-11
Identity = 39/68 (57.35%), Postives = 42/68 (61.76%), Query Frame = 0
Query: 1 MTTGWRRKKLWLEVEEFMVGGGRSCGWRPKMT--------------TGWRRKKASLEVDE 55
M TGWRRKKLWLE EE +VGGGR GWR K GWRRKKASLE +E
Sbjct: 1 MMTGWRRKKLWLEAEEGVVGGGRRRGWRLKKAWLEAEEGVVGGGRRRGWRRKKASLEAEE 60
BLAST of MELO3C030710 vs. NCBI nr
Match:
KAA0047052.1 (hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 72.4 bits (176), Expect = 2.3e-09
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query: 18 MVGGGRSC--------GWRPKMTTGWRRKKASLEVDEGVVGGGRREKIVKNILERE 66
MVGGGRSC GWRPKMTTGWRRKKASLE +EGVVGGG R + + ++ ++
Sbjct: 1 MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVRKK 56
BLAST of MELO3C030710 vs. NCBI nr
Match:
KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa])
HSP 1 Score: 63.9 bits (154), Expect = 8.3e-07
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0
Query: 1 MTTGWRRKKLWLEVEEFMVGGGRSCGWRPKMTTGWRRKKASLEVDEGVVGGGRREKIVKN 60
M TGWRRKK LE EE +VGG ++ WRRKK LE +EGVVGGGRR + +
Sbjct: 1 MMTGWRRKKASLEAEEGVVGG--------RIRRRWRRKKTFLEAEEGVVGGGRRRRAKEG 60
Query: 61 ILEREKITETNG 73
+L E + G
Sbjct: 61 VLNVENGKDEEG 64
BLAST of MELO3C030710 vs. ExPASy TrEMBL
Match:
A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 9.9e-14
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0
Query: 15 EEFMVGGGRSCGWRPKMTTGWRRKKASLEVDEGVVGGGRREKIVKNILEREKITE 70
EE +VGGGRSCGWRPKMTTGWR+KKASLE EG+VGGGRR + + +LE K E
Sbjct: 83 EEVVVGGGRSCGWRPKMTTGWRQKKASLEAKEGIVGGGRRRRAEEGVLENGKAEE 137
BLAST of MELO3C030710 vs. ExPASy TrEMBL
Match:
A0A5D3BFA0 (S-antigen protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15972G00010 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 4.6e-11
Identity = 39/68 (57.35%), Postives = 42/68 (61.76%), Query Frame = 0
Query: 1 MTTGWRRKKLWLEVEEFMVGGGRSCGWRPKMT--------------TGWRRKKASLEVDE 55
M TGWRRKKLWLE EE +VGGGR GWR K GWRRKKASLE +E
Sbjct: 1 MMTGWRRKKLWLEAEEGVVGGGRRRGWRLKKAWLEAEEGVVGGGRRRGWRRKKASLEAEE 60
BLAST of MELO3C030710 vs. ExPASy TrEMBL
Match:
A0A5A7TUB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00040 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query: 18 MVGGGRSC--------GWRPKMTTGWRRKKASLEVDEGVVGGGRREKIVKNILERE 66
MVGGGRSC GWRPKMTTGWRRKKASLE +EGVVGGG R + + ++ ++
Sbjct: 1 MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVRKK 56
BLAST of MELO3C030710 vs. ExPASy TrEMBL
Match:
A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 4.0e-07
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0
Query: 1 MTTGWRRKKLWLEVEEFMVGGGRSCGWRPKMTTGWRRKKASLEVDEGVVGGGRREKIVKN 60
M TGWRRKK LE EE +VGG ++ WRRKK LE +EGVVGGGRR + +
Sbjct: 1 MMTGWRRKKASLEAEEGVVGG--------RIRRRWRRKKTFLEAEEGVVGGGRRRRAKEG 60
Query: 61 ILEREKITETNG 73
+L E + G
Sbjct: 61 VLNVENGKDEEG 64
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0025306.1 | 2.0e-13 | 69.09 | hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa] | [more] |
| TYJ97125.1 | 9.5e-11 | 57.35 | S-antigen protein-like [Cucumis melo var. makuwa] | [more] |
| KAA0047052.1 | 2.3e-09 | 60.71 | hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa] | [more] |
| KAA0063229.1 | 8.3e-07 | 47.22 | lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SHI4 | 9.9e-14 | 69.09 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3BFA0 | 4.6e-11 | 57.35 | S-antigen protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... | [more] |
| A0A5A7TUB6 | 1.1e-09 | 60.71 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CTI7 | 4.0e-07 | 47.22 | Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
