Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGATACCAAGAAACGTGAGCGAGATAATCTGTGAGCATATCATTGCATGTGTCAAGCATCCTCATGATGCGAGGCCCTTCCCACATTTGATTGAAGAACTTTCTTTGAAGGCATGTATGGCGTTAGAAAAAATCCCTCGGACTGTGGTAAAACATGATATTTGTACAGCAACTAGTCTTCACCACATAATCAATCTCCATAGAAACAAAACAAAAACTAAACGCCTAAAGACGAAGAAAGAAGGAAAAATTAAGATTGTTAATGAAGTGGAGATAGAAGAAGAAGTAGAAGAAGAAGAGAGGGAAAATACACAAGTTCCCTTAAAGCAAAAGAGAAAATGCAAGGAGGAGGCTTCAAGCTCAAAGAAGAAGATAAAATTTGAAGCTAAGGACTCCAGGGACCCATTGTCTCTCGCACTGACCATCTTGCCCCAAGACCAAACGCCTAAAGAAACCATTTCGCCCCCAAAATTCAAAACCACTAAGGCCAAGATCAGAAGCTTACCATCCGGAACTCCACCACCACCACTTTTATCAACTAAAAAACAAACTCCTTCAACATCCAAAACCAAATCGTCTAACCCTTCCTACAAAATCTAA
mRNA sequence
ATGGAGGAGATACCAAGAAACGTGAGCGAGATAATCTGTGAGCATATCATTGCATGTGTCAAGCATCCTCATGATGCGAGGCCCTTCCCACATTTGATTGAAGAACTTTCTTTGAAGGCATGTATGGCGTTAGAAAAAATCCCTCGGACTGTGGTAAAACATGATATTTGTACAGCAACTAGTCTTCACCACATAATCAATCTCCATAGAAACAAAACAAAAACTAAACGCCTAAAGACGAAGAAAGAAGGAAAAATTAAGATTGTTAATGAAGTGGAGATAGAAGAAGAAGTAGAAGAAGAAGAGAGGGAAAATACACAAGTTCCCTTAAAGCAAAAGAGAAAATGCAAGGAGGAGGCTTCAAGCTCAAAGAAGAAGATAAAATTTGAAGCTAAGGACTCCAGGGACCCATTGTCTCTCGCACTGACCATCTTGCCCCAAGACCAAACGCCTAAAGAAACCATTTCGCCCCCAAAATTCAAAACCACTAAGGCCAAGATCAGAAGCTTACCATCCGGAACTCCACCACCACCACTTTTATCAACTAAAAAACAAACTCCTTCAACATCCAAAACCAAATCGTCTAACCCTTCCTACAAAATCTAA
Coding sequence (CDS)
ATGGAGGAGATACCAAGAAACGTGAGCGAGATAATCTGTGAGCATATCATTGCATGTGTCAAGCATCCTCATGATGCGAGGCCCTTCCCACATTTGATTGAAGAACTTTCTTTGAAGGCATGTATGGCGTTAGAAAAAATCCCTCGGACTGTGGTAAAACATGATATTTGTACAGCAACTAGTCTTCACCACATAATCAATCTCCATAGAAACAAAACAAAAACTAAACGCCTAAAGACGAAGAAAGAAGGAAAAATTAAGATTGTTAATGAAGTGGAGATAGAAGAAGAAGTAGAAGAAGAAGAGAGGGAAAATACACAAGTTCCCTTAAAGCAAAAGAGAAAATGCAAGGAGGAGGCTTCAAGCTCAAAGAAGAAGATAAAATTTGAAGCTAAGGACTCCAGGGACCCATTGTCTCTCGCACTGACCATCTTGCCCCAAGACCAAACGCCTAAAGAAACCATTTCGCCCCCAAAATTCAAAACCACTAAGGCCAAGATCAGAAGCTTACCATCCGGAACTCCACCACCACCACTTTTATCAACTAAAAAACAAACTCCTTCAACATCCAAAACCAAATCGTCTAACCCTTCCTACAAAATCTAA
Protein sequence
MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTATSLHHIINLHRNKTKTKRLKTKKEGKIKIVNEVEIEEEVEEEERENTQVPLKQKRKCKEEASSSKKKIKFEAKDSRDPLSLALTILPQDQTPKETISPPKFKTTKAKIRSLPSGTPPPPLLSTKKQTPSTSKTKSSNPSYKI
Homology
BLAST of MELO3C025939 vs. NCBI nr
Match:
KAA0067069.1 (hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK26305.1 hypothetical protein E5676_scaffold14G00820 [Cucumis melo var. makuwa])
HSP 1 Score: 192.6 bits (488), Expect = 3.3e-45
Identity = 119/167 (71.26%), Postives = 136/167 (81.44%), Query Frame = 0
Query: 36 LSLKACMA-LEKIPRTVVKHDICTATSLHHIINLHRNKTKTKRLKTKKEGKIKIVNEVEI 95
L LKAC A LEK P+TVVK DICT +L IINLHRNK KTK LKTKKEG+ +V+EVE
Sbjct: 2 LYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDEVET 61
Query: 96 EEEVEEEERENTQVPLKQKRKCKEEASSSKKKIKFEAKDSRDPLSLALTILPQDQTPKET 155
+ EEEERE+ QVPLK+KRK +EE SS K+K++ +AKDSRDPL LALTI+PQDQTPKET
Sbjct: 62 K---EEEEREDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKET 121
Query: 156 ISPPKFKTTKAKIRSLPSGTPPPPLLSTKKQTPSTSKTKSSNPSYKI 202
IS PK KTT AKI S PSGTPPPPL S +KQTPSTSKTKS +PS+KI
Sbjct: 122 ISLPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKI 165
BLAST of MELO3C025939 vs. NCBI nr
Match:
KAA0058409.1 (hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK04704.1 hypothetical protein E5676_scaffold76994G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 122.9 bits (307), Expect = 3.2e-24
Identity = 76/142 (53.52%), Postives = 104/142 (73.24%), Query Frame = 0
Query: 1 MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTAT 60
+EEI NV +IICEHI A V+HPHDARP P+LIE++ LKAC AL+ + +T+VK +ICT T
Sbjct: 21 IEEILVNVGKIICEHIQAWVRHPHDARPLPNLIEQIFLKACFALKNLLKTMVKDEICTIT 80
Query: 61 SLHHIINLHRNKTKTKRLKTKKEGKIKIVNEVEIEEEVEEEERENTQVPLKQKRKCKEEA 120
S+ H+INL++NK + K LKTK+ K+K +++EI+E EEE + T PL +K K + +A
Sbjct: 81 SVSHMINLNKNKAEDKCLKTKEIEKVKEDDKMEIDE--EEEREDETLSPLIRKMKGENKA 140
Query: 121 -SSSKKKIKFEAKDSRDPLSLA 142
S K+K K +AKDSRD L LA
Sbjct: 141 FGSRKRKRKPKAKDSRDLLPLA 160
BLAST of MELO3C025939 vs. NCBI nr
Match:
TYJ97737.1 (protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 115.5 bits (288), Expect = 5.2e-22
Identity = 82/200 (41.00%), Postives = 110/200 (55.00%), Query Frame = 0
Query: 1 MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTAT 60
MEEIP N+ +II EHI A VK P ARPFP+LIE+L LKAC AL+K+P+ VK ++ + +
Sbjct: 72 MEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEVWSNS 131
Query: 61 SLHHIINLHRNKTKTKRLKTKKEGKIKIVNEVEIEEEVEEEERENTQVPLKQKRKCKEEA 120
HHII +H+NKTK KRLKTK++ +EEA
Sbjct: 132 IRHHIIAIHKNKTKLKRLKTKQDD--------------------------------EEEA 191
Query: 121 SSSKKKIKFEAKDSRDPLSLALTILPQDQTPKETISPPKFKTTKAKIRSLP--SGTPPPP 180
S SKK +AKDS++ LS A T +P+ + P SP K K++KA P S TPPPP
Sbjct: 192 SESKKIKTCKAKDSKETLSFASTKIPKKKKPTNLPSPNKSKSSKATSSQTPTKSKTPPPP 239
Query: 181 LLSTKKQTPSTSKTKSSNPS 199
+K +S+P+
Sbjct: 252 PEKSKSPILFQEIQNTSSPN 239
BLAST of MELO3C025939 vs. NCBI nr
Match:
KAA0066376.1 (hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa])
HSP 1 Score: 112.1 bits (279), Expect = 5.7e-21
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query: 1 MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTAT 60
MEE+ N+ EIICEHI+ CVKHP+ AR FPHLIE+L LK C+ALEK+P+ VK +CT
Sbjct: 118 MEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMCTTI 177
Query: 61 SLHHIINLHRNKTKTKRLKTKKEG 85
+L II +H+NK + KRLKTKKEG
Sbjct: 178 TLPRIIAIHKNKARLKRLKTKKEG 201
BLAST of MELO3C025939 vs. NCBI nr
Match:
TYK00908.1 (hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa])
HSP 1 Score: 112.1 bits (279), Expect = 5.7e-21
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query: 1 MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTAT 60
MEE+ N+ EIICEHI+ CVKHP+ AR FPHLIE+L LK C+ALEK+P+ VK +CT
Sbjct: 21 MEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMCTTI 80
Query: 61 SLHHIINLHRNKTKTKRLKTKKEG 85
+L II +H+NK + KRLKTKKEG
Sbjct: 81 TLPRIIAIHKNKARLKRLKTKKEG 104
BLAST of MELO3C025939 vs. ExPASy TrEMBL
Match:
A0A5A7VP61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00820 PE=4 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 1.6e-45
Identity = 119/167 (71.26%), Postives = 136/167 (81.44%), Query Frame = 0
Query: 36 LSLKACMA-LEKIPRTVVKHDICTATSLHHIINLHRNKTKTKRLKTKKEGKIKIVNEVEI 95
L LKAC A LEK P+TVVK DICT +L IINLHRNK KTK LKTKKEG+ +V+EVE
Sbjct: 2 LYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDEVET 61
Query: 96 EEEVEEEERENTQVPLKQKRKCKEEASSSKKKIKFEAKDSRDPLSLALTILPQDQTPKET 155
+ EEEERE+ QVPLK+KRK +EE SS K+K++ +AKDSRDPL LALTI+PQDQTPKET
Sbjct: 62 K---EEEEREDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKET 121
Query: 156 ISPPKFKTTKAKIRSLPSGTPPPPLLSTKKQTPSTSKTKSSNPSYKI 202
IS PK KTT AKI S PSGTPPPPL S +KQTPSTSKTKS +PS+KI
Sbjct: 122 ISLPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKI 165
BLAST of MELO3C025939 vs. ExPASy TrEMBL
Match:
A0A5D3C0C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76994G00060 PE=4 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 1.6e-24
Identity = 76/142 (53.52%), Postives = 104/142 (73.24%), Query Frame = 0
Query: 1 MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTAT 60
+EEI NV +IICEHI A V+HPHDARP P+LIE++ LKAC AL+ + +T+VK +ICT T
Sbjct: 21 IEEILVNVGKIICEHIQAWVRHPHDARPLPNLIEQIFLKACFALKNLLKTMVKDEICTIT 80
Query: 61 SLHHIINLHRNKTKTKRLKTKKEGKIKIVNEVEIEEEVEEEERENTQVPLKQKRKCKEEA 120
S+ H+INL++NK + K LKTK+ K+K +++EI+E EEE + T PL +K K + +A
Sbjct: 81 SVSHMINLNKNKAEDKCLKTKEIEKVKEDDKMEIDE--EEEREDETLSPLIRKMKGENKA 140
Query: 121 -SSSKKKIKFEAKDSRDPLSLA 142
S K+K K +AKDSRD L LA
Sbjct: 141 FGSRKRKRKPKAKDSRDLLPLA 160
BLAST of MELO3C025939 vs. ExPASy TrEMBL
Match:
A0A5D3BF32 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00380 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 2.5e-22
Identity = 82/200 (41.00%), Postives = 110/200 (55.00%), Query Frame = 0
Query: 1 MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTAT 60
MEEIP N+ +II EHI A VK P ARPFP+LIE+L LKAC AL+K+P+ VK ++ + +
Sbjct: 72 MEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEVWSNS 131
Query: 61 SLHHIINLHRNKTKTKRLKTKKEGKIKIVNEVEIEEEVEEEERENTQVPLKQKRKCKEEA 120
HHII +H+NKTK KRLKTK++ +EEA
Sbjct: 132 IRHHIIAIHKNKTKLKRLKTKQDD--------------------------------EEEA 191
Query: 121 SSSKKKIKFEAKDSRDPLSLALTILPQDQTPKETISPPKFKTTKAKIRSLP--SGTPPPP 180
S SKK +AKDS++ LS A T +P+ + P SP K K++KA P S TPPPP
Sbjct: 192 SESKKIKTCKAKDSKETLSFASTKIPKKKKPTNLPSPNKSKSSKATSSQTPTKSKTPPPP 239
Query: 181 LLSTKKQTPSTSKTKSSNPS 199
+K +S+P+
Sbjct: 252 PEKSKSPILFQEIQNTSSPN 239
BLAST of MELO3C025939 vs. ExPASy TrEMBL
Match:
A0A5A7VJ48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004490 PE=4 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 2.8e-21
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query: 1 MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTAT 60
MEE+ N+ EIICEHI+ CVKHP+ AR FPHLIE+L LK C+ALEK+P+ VK +CT
Sbjct: 118 MEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMCTTI 177
Query: 61 SLHHIINLHRNKTKTKRLKTKKEG 85
+L II +H+NK + KRLKTKKEG
Sbjct: 178 TLPRIIAIHKNKARLKRLKTKKEG 201
BLAST of MELO3C025939 vs. ExPASy TrEMBL
Match:
A0A5D3BPB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00710 PE=4 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 2.8e-21
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query: 1 MEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELSLKACMALEKIPRTVVKHDICTAT 60
MEE+ N+ EIICEHI+ CVKHP+ AR FPHLIE+L LK C+ALEK+P+ VK +CT
Sbjct: 21 MEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMCTTI 80
Query: 61 SLHHIINLHRNKTKTKRLKTKKEG 85
+L II +H+NK + KRLKTKKEG
Sbjct: 81 TLPRIIAIHKNKARLKRLKTKKEG 104
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0067069.1 | 3.3e-45 | 71.26 | hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK2630... | [more] |
| KAA0058409.1 | 3.2e-24 | 53.52 | hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK047... | [more] |
| TYJ97737.1 | 5.2e-22 | 41.00 | protein MNN4-like [Cucumis melo var. makuwa] | [more] |
| KAA0066376.1 | 5.7e-21 | 61.90 | hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa] | [more] |
| TYK00908.1 | 5.7e-21 | 61.90 | hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VP61 | 1.6e-45 | 71.26 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3C0C3 | 1.6e-24 | 53.52 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3BF32 | 2.5e-22 | 41.00 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0... | [more] |
| A0A5A7VJ48 | 2.8e-21 | 61.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3BPB1 | 2.8e-21 | 61.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
