MELO3C024727 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024727
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC103484405
Location	chr11: 7181638 .. 7181835 (+)
RNA-Seq Expression	MELO3C024727
Synteny	MELO3C024727

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTGCACCAAGGTTGGACAGATTAATAACAAATTGGAGAAGATGGAGAAACACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATACACCAAGCTCTTCAAATGCTACTTTGTTCACCCCCGATTCTCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTAGGACAGCAAAGAATAATTTTTAA

mRNA sequence

ATGGGAATTGCACCAAGGTTGGACAGATTAATAACAAATTGGAGAAGATGGAGAAACACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATACACCAAGCTCTTCAAATGCTACTTTGTTCACCCCCGATTCTCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTAGGACAGCAAAGAATAATTTTTAA

Coding sequence (CDS)

ATGGGAATTGCACCAAGGTTGGACAGATTAATAACAAATTGGAGAAGATGGAGAAACACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATACACCAAGCTCTTCAAATGCTACTTTGTTCACCCCCGATTCTCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTAGGACAGCAAAGAATAATTTTTAA

Protein sequence

MGIAPRLDRLITNWRRWRNTKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF

Homology

[Close]

BLAST of MELO3C024727 vs. NCBI nr
Match: KAE8652626.1 (hypothetical protein Csa_013270 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 485 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 530

[Close]

BLAST of MELO3C024727 vs. NCBI nr
Match: XP_011652073.1 (uncharacterized protein LOC101214766 isoform X1 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 546 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 591

[Close]

BLAST of MELO3C024727 vs. NCBI nr
Match: XP_011652091.1 (uncharacterized protein LOC101214766 isoform X5 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 509 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 554

[Close]

BLAST of MELO3C024727 vs. NCBI nr
Match: XP_011652077.1 (uncharacterized protein LOC101214766 isoform X2 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 546 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 591

[Close]

BLAST of MELO3C024727 vs. NCBI nr
Match: XP_011652083.1 (uncharacterized protein LOC101214766 isoform X3 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 519 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 564

[Close]

BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match: A0A0A0LTU2 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050430 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 568 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 613

[Close]

BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match: A0A1S4DTS2 (LOW QUALITY PROTEIN: uncharacterized protein LOC103484405 OS=Cucumis melo OX=3656 GN=LOC103484405 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 546 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 591

[Close]

BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match: A0A6J1KJT2 (uncharacterized protein LOC111495258 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495258 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATL  PDSQPKMEMDSIPSSS TAKNNF
Sbjct: 515 TKNTDQVTGEEDTPSSSNATLTAPDSQPKMEMDSIPSSSGTAKNNF 560

[Close]

BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match: A0A6J1KLH7 (uncharacterized protein LOC111495258 isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111495258 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATL  PDSQPKMEMDSIPSSS TAKNNF
Sbjct: 489 TKNTDQVTGEEDTPSSSNATLTAPDSQPKMEMDSIPSSSGTAKNNF 534

[Close]

BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match: A0A6J1KF70 (uncharacterized protein LOC111495258 isoform X9 OS=Cucurbita maxima OX=3661 GN=LOC111495258 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 20  TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
           TKNTDQVTGEEDTPSSSNATL  PDSQPKMEMDSIPSSS TAKNNF
Sbjct: 484 TKNTDQVTGEEDTPSSSNATLTAPDSQPKMEMDSIPSSSGTAKNNF 529

The following BLAST results are available for this feature:

BLAST of MELO3C024727 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652626.1	2.8e-14	97.83	hypothetical protein Csa_013270 [Cucumis sativus]	[more]
XP_011652073.1	2.8e-14	97.83	uncharacterized protein LOC101214766 isoform X1 [Cucumis sativus]	[more]
XP_011652091.1	2.8e-14	97.83	uncharacterized protein LOC101214766 isoform X5 [Cucumis sativus]	[more]
XP_011652077.1	2.8e-14	97.83	uncharacterized protein LOC101214766 isoform X2 [Cucumis sativus]	[more]
XP_011652083.1	2.8e-14	97.83	uncharacterized protein LOC101214766 isoform X3 [Cucumis sativus]	[more]

BLAST of MELO3C024727 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C024727 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTU2	1.4e-14	97.83	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050430 PE=4 SV...	[more]
A0A1S4DTS2	1.4e-14	97.83	LOW QUALITY PROTEIN: uncharacterized protein LOC103484405 OS=Cucumis melo OX=365...	[more]
A0A6J1KJT2	4.4e-13	93.48	uncharacterized protein LOC111495258 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KLH7	4.4e-13	93.48	uncharacterized protein LOC111495258 isoform X6 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KF70	4.4e-13	93.48	uncharacterized protein LOC111495258 isoform X9 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MELO3C024727 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024727.1	MELO3C024727.1	mRNA