Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTGCACCAAGGTTGGACAGATTAATAACAAATTGGAGAAGATGGAGAAACACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATACACCAAGCTCTTCAAATGCTACTTTGTTCACCCCCGATTCTCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTAGGACAGCAAAGAATAATTTTTAA
mRNA sequence
ATGGGAATTGCACCAAGGTTGGACAGATTAATAACAAATTGGAGAAGATGGAGAAACACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATACACCAAGCTCTTCAAATGCTACTTTGTTCACCCCCGATTCTCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTAGGACAGCAAAGAATAATTTTTAA
Coding sequence (CDS)
ATGGGAATTGCACCAAGGTTGGACAGATTAATAACAAATTGGAGAAGATGGAGAAACACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATACACCAAGCTCTTCAAATGCTACTTTGTTCACCCCCGATTCTCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTAGGACAGCAAAGAATAATTTTTAA
Protein sequence
MGIAPRLDRLITNWRRWRNTKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF
Homology
BLAST of MELO3C024727 vs. NCBI nr
Match:
KAE8652626.1 (hypothetical protein Csa_013270 [Cucumis sativus])
HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 485 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 530
BLAST of MELO3C024727 vs. NCBI nr
Match:
XP_011652073.1 (uncharacterized protein LOC101214766 isoform X1 [Cucumis sativus])
HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 546 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 591
BLAST of MELO3C024727 vs. NCBI nr
Match:
XP_011652091.1 (uncharacterized protein LOC101214766 isoform X5 [Cucumis sativus])
HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 509 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 554
BLAST of MELO3C024727 vs. NCBI nr
Match:
XP_011652077.1 (uncharacterized protein LOC101214766 isoform X2 [Cucumis sativus])
HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 546 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 591
BLAST of MELO3C024727 vs. NCBI nr
Match:
XP_011652083.1 (uncharacterized protein LOC101214766 isoform X3 [Cucumis sativus])
HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 519 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 564
BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match:
A0A0A0LTU2 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050430 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 568 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 613
BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match:
A0A1S4DTS2 (LOW QUALITY PROTEIN: uncharacterized protein LOC103484405 OS=Cucumis melo OX=3656 GN=LOC103484405 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSS TAKNNF
Sbjct: 546 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNF 591
BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match:
A0A6J1KJT2 (uncharacterized protein LOC111495258 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495258 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATL PDSQPKMEMDSIPSSS TAKNNF
Sbjct: 515 TKNTDQVTGEEDTPSSSNATLTAPDSQPKMEMDSIPSSSGTAKNNF 560
BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match:
A0A6J1KLH7 (uncharacterized protein LOC111495258 isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111495258 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATL PDSQPKMEMDSIPSSS TAKNNF
Sbjct: 489 TKNTDQVTGEEDTPSSSNATLTAPDSQPKMEMDSIPSSSGTAKNNF 534
BLAST of MELO3C024727 vs. ExPASy TrEMBL
Match:
A0A6J1KF70 (uncharacterized protein LOC111495258 isoform X9 OS=Cucurbita maxima OX=3661 GN=LOC111495258 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 20 TKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSRTAKNNF 66
TKNTDQVTGEEDTPSSSNATL PDSQPKMEMDSIPSSS TAKNNF
Sbjct: 484 TKNTDQVTGEEDTPSSSNATLTAPDSQPKMEMDSIPSSSGTAKNNF 529
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8652626.1 | 2.8e-14 | 97.83 | hypothetical protein Csa_013270 [Cucumis sativus] | [more] |
| XP_011652073.1 | 2.8e-14 | 97.83 | uncharacterized protein LOC101214766 isoform X1 [Cucumis sativus] | [more] |
| XP_011652091.1 | 2.8e-14 | 97.83 | uncharacterized protein LOC101214766 isoform X5 [Cucumis sativus] | [more] |
| XP_011652077.1 | 2.8e-14 | 97.83 | uncharacterized protein LOC101214766 isoform X2 [Cucumis sativus] | [more] |
| XP_011652083.1 | 2.8e-14 | 97.83 | uncharacterized protein LOC101214766 isoform X3 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LTU2 | 1.4e-14 | 97.83 | AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050430 PE=4 SV... | [more] |
| A0A1S4DTS2 | 1.4e-14 | 97.83 | LOW QUALITY PROTEIN: uncharacterized protein LOC103484405 OS=Cucumis melo OX=365... | [more] |
| A0A6J1KJT2 | 4.4e-13 | 93.48 | uncharacterized protein LOC111495258 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1KLH7 | 4.4e-13 | 93.48 | uncharacterized protein LOC111495258 isoform X6 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1KF70 | 4.4e-13 | 93.48 | uncharacterized protein LOC111495258 isoform X9 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
