Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAAAAAAAAAAAAGAAAGAAACTCCCTCCTCGTCAATAGTACCAACAAAATTTAAGAAGGTTGCCAAAGAAGCCCAAAAGAAGAGCGAGAAGGTTAGATTTGGGCTTTTAAAAATAAAGGTCAAGGCACAAAGTGTTAAAGCCATAGCAGAAGAAAAGAAAGAACAGAAGTTGAAGGAGCGGGGAGAGCTCCTCAATCGAGTTGACGAAGTAGCCCTCTCCACGGAGAAGCACAAGGCAAAGAAAACCACTGAAGAGTATTTCGAGGAGTTTAAAAACAATGGAGGAGGAAGAAGAAGAGGAGGTGGAATCTTCAAAGAAAATGAATGTTGTGATAAAAGGAAAAGATTTGGAAAATCAGGACGCTAA
mRNA sequence
ATGCAAAAAAAAAAAAAAAGAAAGAAACTCCCTCCTCGTCAATAGTACCAACAAAATTTAAGAAGGTTGCCAAAGAAGCCCAAAAGAAGAGCGAGAAGGTTAGATTTGGGCTTTTAAAAATAAAGGTCAAGGCACAAAGTGTTAAAGCCATAGCAGAAGAAAAGAAAGAACAGAAGTTGAAGGAGCGGGGAGAGCTCCTCAATCGAGTTGACGAAGTAGCCCTCTCCACGGAGAAGCACAAGGCAAAGAAAACCACTGAAGAGTATTTCGAGGAGTTTAAAAACAATGGAGGAGGAAGAAGAAGAGGAGGTGGAATCTTCAAAGAAAATGAATGTTGTGATAAAAGGAAAAGATTTGGAAAATCAGGACGCTAA
Coding sequence (CDS)
GCAAAAAAAAAAAAAAAGAAAGAAACTCCCTCCTCGTCAATAGTACCAACAAAATTTAAGAAGGTTGCCAAAGAAGCCCAAAAGAAGAGCGAGAAGGTTAGATTTGGGCTTTTAAAAATAAAGGTCAAGGCACAAAGTGTTAAAGCCATAGCAGAAGAAAAGAAAGAACAGAAGTTGAAGGAGCGGGGAGAGCTCCTCAATCGAGTTGACGAAGTAGCCCTCTCCACGGAGAAGCACAAGGCAAAGAAAACCACTGAAGAGTATTTCGAGGAGTTTAAAAACAATGGAGGAGGAAGAAGAAGAGGAGGTGGAATCTTCAAAGAAAATGAATGTTGTGATAAAAGGAAAAGATTTGGAAAATCAGGACGCTAA
Protein sequence
AKKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVDEVALSTEKHKAKKTTEEYFEEFKNNGGGRRRGGGIFKENECCDKRKRFGKSGR
Homology
BLAST of MELO3C018964 vs. NCBI nr
Match:
TYK25982.1 (protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 84.7 bits (208), Expect = 6.0e-13
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0
Query: 2 KKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKE 61
K++ +KE S IVPT K+VAKE+Q KSEKV+ L KIKVKAQ KA+A+EKKE KLKE
Sbjct: 28 KREDEKEASSLPIVPT--KRVAKESQ-KSEKVKSRLPKIKVKAQGAKALADEKKENKLKE 87
Query: 62 RGELLNRVDEVALSTEKHKAKKTTEEYFEEFK 94
+ E LNR DEV LST+K KAKK TEEY +EF+
Sbjct: 88 QEEHLNREDEVDLSTKKGKAKKITEEYCKEFE 116
BLAST of MELO3C018964 vs. NCBI nr
Match:
KAA0032116.1 (protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 84.7 bits (208), Expect = 6.0e-13
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0
Query: 2 KKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKE 61
K++ +KE S IVPT K+VAKE+Q KSEKV+ L KIKVKAQ KA+A+EKKE KLKE
Sbjct: 46 KREDEKEASSLPIVPT--KRVAKESQ-KSEKVKSRLPKIKVKAQGAKALADEKKENKLKE 105
Query: 62 RGELLNRVDEVALSTEKHKAKKTTEEYFEEFK 94
+ E LNR DEV LST+K KAKK TEEY +EF+
Sbjct: 106 QEEHLNREDEVDLSTKKGKAKKITEEYCKEFE 134
BLAST of MELO3C018964 vs. NCBI nr
Match:
TYJ97774.1 (protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 81.6 bits (200), Expect = 5.0e-12
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query: 11 SSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVD 70
S I KF +V+++AQK+ EKV+ LLKIKVKAQ VKA+AEEKKE KLKE+ ELLN+V+
Sbjct: 123 SMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVN 182
Query: 71 EVALSTEKHKAK-KTTEEYFEEFK 94
++ALS E K K KT EEY EEF+
Sbjct: 183 KLALSVENSKEKEKTFEEYCEEFE 206
BLAST of MELO3C018964 vs. NCBI nr
Match:
KAA0045354.1 (protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 81.3 bits (199), Expect = 6.6e-12
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0
Query: 17 TKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVDEVALST 76
T+FKKVA +A K EKV F LLK+KV + +KA+AEEKKE++LK+ ELLN V+++ LS
Sbjct: 4 TEFKKVAAKAHAKKEKVAFCLLKLKVTTRGIKALAEEKKEKRLKDLEELLNIVEKITLSI 63
Query: 77 EKHKAKKTTEEYFEEFK 94
EK KAKKTT+EY EEF+
Sbjct: 64 EKGKAKKTTKEYCEEFE 80
BLAST of MELO3C018964 vs. NCBI nr
Match:
TYK00332.1 (protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 0
Query: 4 KKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERG 63
KK+K S SI PT+F++VA++AQKK EKV GLLK+KV Q KA+ +EKKE KL+E+
Sbjct: 79 KKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKEVKLREQE 138
Query: 64 ELLNRVDEVALSTEKHKAKKT-TEEYFEEFK 94
ELLN++D+V L +K K K T +EE EEFK
Sbjct: 139 ELLNKIDKVPLFAKKRKVKNTLSEELVEEFK 169
BLAST of MELO3C018964 vs. ExPASy TrEMBL
Match:
A0A5D3DR16 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold425G00040 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 2.9e-13
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0
Query: 2 KKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKE 61
K++ +KE S IVPT K+VAKE+Q KSEKV+ L KIKVKAQ KA+A+EKKE KLKE
Sbjct: 28 KREDEKEASSLPIVPT--KRVAKESQ-KSEKVKSRLPKIKVKAQGAKALADEKKENKLKE 87
Query: 62 RGELLNRVDEVALSTEKHKAKKTTEEYFEEFK 94
+ E LNR DEV LST+K KAKK TEEY +EF+
Sbjct: 88 QEEHLNREDEVDLSTKKGKAKKITEEYCKEFE 116
BLAST of MELO3C018964 vs. ExPASy TrEMBL
Match:
A0A5A7SQ21 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00140 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 2.9e-13
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0
Query: 2 KKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKE 61
K++ +KE S IVPT K+VAKE+Q KSEKV+ L KIKVKAQ KA+A+EKKE KLKE
Sbjct: 46 KREDEKEASSLPIVPT--KRVAKESQ-KSEKVKSRLPKIKVKAQGAKALADEKKENKLKE 105
Query: 62 RGELLNRVDEVALSTEKHKAKKTTEEYFEEFK 94
+ E LNR DEV LST+K KAKK TEEY +EF+
Sbjct: 106 QEEHLNREDEVDLSTKKGKAKKITEEYCKEFE 134
BLAST of MELO3C018964 vs. ExPASy TrEMBL
Match:
A0A5D3BFC8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00900 PE=4 SV=1)
HSP 1 Score: 81.6 bits (200), Expect = 2.4e-12
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query: 11 SSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVD 70
S I KF +V+++AQK+ EKV+ LLKIKVKAQ VKA+AEEKKE KLKE+ ELLN+V+
Sbjct: 123 SMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVN 182
Query: 71 EVALSTEKHKAK-KTTEEYFEEFK 94
++ALS E K K KT EEY EEF+
Sbjct: 183 KLALSVENSKEKEKTFEEYCEEFE 206
BLAST of MELO3C018964 vs. ExPASy TrEMBL
Match:
A0A5A7TQG2 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001330 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0
Query: 17 TKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVDEVALST 76
T+FKKVA +A K EKV F LLK+KV + +KA+AEEKKE++LK+ ELLN V+++ LS
Sbjct: 4 TEFKKVAAKAHAKKEKVAFCLLKLKVTTRGIKALAEEKKEKRLKDLEELLNIVEKITLSI 63
Query: 77 EKHKAKKTTEEYFEEFK 94
EK KAKKTT+EY EEF+
Sbjct: 64 EKGKAKKTTKEYCEEFE 80
BLAST of MELO3C018964 vs. ExPASy TrEMBL
Match:
A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 7.1e-12
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 0
Query: 4 KKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERG 63
KK+K S SI PT+F++VA++AQKK EKV GLLK+KV Q KA+ +EKKE KL+E+
Sbjct: 79 KKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKEVKLREQE 138
Query: 64 ELLNRVDEVALSTEKHKAKKT-TEEYFEEFK 94
ELLN++D+V L +K K K T +EE EEFK
Sbjct: 139 ELLNKIDKVPLFAKKRKVKNTLSEELVEEFK 169
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DR16 | 2.9e-13 | 64.13 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold425G00... | [more] |
| A0A5A7SQ21 | 2.9e-13 | 64.13 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00... | [more] |
| A0A5D3BFC8 | 2.4e-12 | 61.90 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0... | [more] |
| A0A5A7TQG2 | 3.2e-12 | 61.04 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00... | [more] |
| A0A5D3BNL6 | 7.1e-12 | 56.04 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
