MELO3C018964.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C018964.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein MNN4-like
Location	chr07: 14059368 .. 14059741 (+)
Sequence length	374
RNA-Seq Expression	MELO3C018964.1
Synteny	MELO3C018964.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAAAAAAAAAAAAGAAAGAAACTCCCTCCTCGTCAATAGTACCAACAAAATTTAAGAAGGTTGCCAAAGAAGCCCAAAAGAAGAGCGAGAAGGTTAGATTTGGGCTTTTAAAAATAAAGGTCAAGGCACAAAGTGTTAAAGCCATAGCAGAAGAAAAGAAAGAACAGAAGTTGAAGGAGCGGGGAGAGCTCCTCAATCGAGTTGACGAAGTAGCCCTCTCCACGGAGAAGCACAAGGCAAAGAAAACCACTGAAGAGTATTTCGAGGAGTTTAAAAACAATGGAGGAGGAAGAAGAAGAGGAGGTGGAATCTTCAAAGAAAATGAATGTTGTGATAAAAGGAAAAGATTTGGAAAATCAGGACGCTAA

mRNA sequence

ATGCAAAAAAAAAAAAAAAGAAAGAAACTCCCTCCTCGTCAATAGTACCAACAAAATTTAAGAAGGTTGCCAAAGAAGCCCAAAAGAAGAGCGAGAAGGTTAGATTTGGGCTTTTAAAAATAAAGGTCAAGGCACAAAGTGTTAAAGCCATAGCAGAAGAAAAGAAAGAACAGAAGTTGAAGGAGCGGGGAGAGCTCCTCAATCGAGTTGACGAAGTAGCCCTCTCCACGGAGAAGCACAAGGCAAAGAAAACCACTGAAGAGTATTTCGAGGAGTTTAAAAACAATGGAGGAGGAAGAAGAAGAGGAGGTGGAATCTTCAAAGAAAATGAATGTTGTGATAAAAGGAAAAGATTTGGAAAATCAGGACGCTAA

Coding sequence (CDS)

GCAAAAAAAAAAAAAAAGAAAGAAACTCCCTCCTCGTCAATAGTACCAACAAAATTTAAGAAGGTTGCCAAAGAAGCCCAAAAGAAGAGCGAGAAGGTTAGATTTGGGCTTTTAAAAATAAAGGTCAAGGCACAAAGTGTTAAAGCCATAGCAGAAGAAAAGAAAGAACAGAAGTTGAAGGAGCGGGGAGAGCTCCTCAATCGAGTTGACGAAGTAGCCCTCTCCACGGAGAAGCACAAGGCAAAGAAAACCACTGAAGAGTATTTCGAGGAGTTTAAAAACAATGGAGGAGGAAGAAGAAGAGGAGGTGGAATCTTCAAAGAAAATGAATGTTGTGATAAAAGGAAAAGATTTGGAAAATCAGGACGCTAA

Protein sequence

AKKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVDEVALSTEKHKAKKTTEEYFEEFKNNGGGRRRGGGIFKENECCDKRKRFGKSGR

Homology

[Close]

BLAST of MELO3C018964.1 vs. NCBI nr
Match: TYK25982.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 6.0e-13
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 2   KKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKE 61
           K++ +KE  S  IVPT  K+VAKE+Q KSEKV+  L KIKVKAQ  KA+A+EKKE KLKE
Sbjct: 28  KREDEKEASSLPIVPT--KRVAKESQ-KSEKVKSRLPKIKVKAQGAKALADEKKENKLKE 87

Query: 62  RGELLNRVDEVALSTEKHKAKKTTEEYFEEFK 94
           + E LNR DEV LST+K KAKK TEEY +EF+
Sbjct: 88  QEEHLNREDEVDLSTKKGKAKKITEEYCKEFE 116

[Close]

BLAST of MELO3C018964.1 vs. NCBI nr
Match: KAA0032116.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 6.0e-13
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 2   KKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKE 61
           K++ +KE  S  IVPT  K+VAKE+Q KSEKV+  L KIKVKAQ  KA+A+EKKE KLKE
Sbjct: 46  KREDEKEASSLPIVPT--KRVAKESQ-KSEKVKSRLPKIKVKAQGAKALADEKKENKLKE 105

Query: 62  RGELLNRVDEVALSTEKHKAKKTTEEYFEEFK 94
           + E LNR DEV LST+K KAKK TEEY +EF+
Sbjct: 106 QEEHLNREDEVDLSTKKGKAKKITEEYCKEFE 134

[Close]

BLAST of MELO3C018964.1 vs. NCBI nr
Match: TYJ97774.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-12
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 11  SSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVD 70
           S  I   KF +V+++AQK+ EKV+  LLKIKVKAQ VKA+AEEKKE KLKE+ ELLN+V+
Sbjct: 123 SMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVN 182

Query: 71  EVALSTEKHKAK-KTTEEYFEEFK 94
           ++ALS E  K K KT EEY EEF+
Sbjct: 183 KLALSVENSKEKEKTFEEYCEEFE 206

[Close]

BLAST of MELO3C018964.1 vs. NCBI nr
Match: KAA0045354.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 6.6e-12
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 17 TKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVDEVALST 76
          T+FKKVA +A  K EKV F LLK+KV  + +KA+AEEKKE++LK+  ELLN V+++ LS 
Sbjct: 4  TEFKKVAAKAHAKKEKVAFCLLKLKVTTRGIKALAEEKKEKRLKDLEELLNIVEKITLSI 63

Query: 77 EKHKAKKTTEEYFEEFK 94
          EK KAKKTT+EY EEF+
Sbjct: 64 EKGKAKKTTKEYCEEFE 80

[Close]

BLAST of MELO3C018964.1 vs. NCBI nr
Match: TYK00332.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 4   KKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERG 63
           KK+K   S SI PT+F++VA++AQKK EKV  GLLK+KV  Q  KA+ +EKKE KL+E+ 
Sbjct: 79  KKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKEVKLREQE 138

Query: 64  ELLNRVDEVALSTEKHKAKKT-TEEYFEEFK 94
           ELLN++D+V L  +K K K T +EE  EEFK
Sbjct: 139 ELLNKIDKVPLFAKKRKVKNTLSEELVEEFK 169

[Close]

BLAST of MELO3C018964.1 vs. ExPASy TrEMBL
Match: A0A5D3DR16 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold425G00040 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.9e-13
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 2   KKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKE 61
           K++ +KE  S  IVPT  K+VAKE+Q KSEKV+  L KIKVKAQ  KA+A+EKKE KLKE
Sbjct: 28  KREDEKEASSLPIVPT--KRVAKESQ-KSEKVKSRLPKIKVKAQGAKALADEKKENKLKE 87

Query: 62  RGELLNRVDEVALSTEKHKAKKTTEEYFEEFK 94
           + E LNR DEV LST+K KAKK TEEY +EF+
Sbjct: 88  QEEHLNREDEVDLSTKKGKAKKITEEYCKEFE 116

[Close]

BLAST of MELO3C018964.1 vs. ExPASy TrEMBL
Match: A0A5A7SQ21 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00140 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.9e-13
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 2   KKKKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKE 61
           K++ +KE  S  IVPT  K+VAKE+Q KSEKV+  L KIKVKAQ  KA+A+EKKE KLKE
Sbjct: 46  KREDEKEASSLPIVPT--KRVAKESQ-KSEKVKSRLPKIKVKAQGAKALADEKKENKLKE 105

Query: 62  RGELLNRVDEVALSTEKHKAKKTTEEYFEEFK 94
           + E LNR DEV LST+K KAKK TEEY +EF+
Sbjct: 106 QEEHLNREDEVDLSTKKGKAKKITEEYCKEFE 134

[Close]

BLAST of MELO3C018964.1 vs. ExPASy TrEMBL
Match: A0A5D3BFC8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00900 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.4e-12
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 11  SSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVD 70
           S  I   KF +V+++AQK+ EKV+  LLKIKVKAQ VKA+AEEKKE KLKE+ ELLN+V+
Sbjct: 123 SMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVN 182

Query: 71  EVALSTEKHKAK-KTTEEYFEEFK 94
           ++ALS E  K K KT EEY EEF+
Sbjct: 183 KLALSVENSKEKEKTFEEYCEEFE 206

[Close]

BLAST of MELO3C018964.1 vs. ExPASy TrEMBL
Match: A0A5A7TQG2 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001330 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 17 TKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERGELLNRVDEVALST 76
          T+FKKVA +A  K EKV F LLK+KV  + +KA+AEEKKE++LK+  ELLN V+++ LS 
Sbjct: 4  TEFKKVAAKAHAKKEKVAFCLLKLKVTTRGIKALAEEKKEKRLKDLEELLNIVEKITLSI 63

Query: 77 EKHKAKKTTEEYFEEFK 94
          EK KAKKTT+EY EEF+
Sbjct: 64 EKGKAKKTTKEYCEEFE 80

[Close]

BLAST of MELO3C018964.1 vs. ExPASy TrEMBL
Match: A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 7.1e-12
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 4   KKKKETPSSSIVPTKFKKVAKEAQKKSEKVRFGLLKIKVKAQSVKAIAEEKKEQKLKERG 63
           KK+K   S SI PT+F++VA++AQKK EKV  GLLK+KV  Q  KA+ +EKKE KL+E+ 
Sbjct: 79  KKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKEVKLREQE 138

Query: 64  ELLNRVDEVALSTEKHKAKKT-TEEYFEEFK 94
           ELLN++D+V L  +K K K T +EE  EEFK
Sbjct: 139 ELLNKIDKVPLFAKKRKVKNTLSEELVEEFK 169

The following BLAST results are available for this feature:

BLAST of MELO3C018964.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25982.1	6.0e-13	64.13	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0032116.1	6.0e-13	64.13	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYJ97774.1	5.0e-12	61.90	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0045354.1	6.6e-12	61.04	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYK00332.1	1.5e-11	56.04	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C018964.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C018964.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DR16	2.9e-13	64.13	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold425G00...	[more]
A0A5A7SQ21	2.9e-13	64.13	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00...	[more]
A0A5D3BFC8	2.4e-12	61.90	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A5A7TQG2	3.2e-12	61.04	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00...	[more]
A0A5D3BNL6	7.1e-12	56.04	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0...	[more]

BLAST of MELO3C018964.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 48..68

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018964	MELO3C018964	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018964.1:exon:209593	MELO3C018964.1:exon:209593	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018964.1:five_prime_utr	MELO3C018964.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018964.1:cds	MELO3C018964.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C018964.1	MELO3C018964.1-protein	polypeptide