MELO3C003414 (gene) Melon (DHL92) v4

Overview
NameMELO3C003414
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionproline-, glutamic acid- and leucine-rich protein 1-like isoform X1
Locationchr04: 924968 .. 926487 (+)
RNA-Seq ExpressionMELO3C003414
SyntenyMELO3C003414
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATTGAGGACATGAGATTTGAACATGGACTTTTGTCGTTAGATATACAGATGAACTATAATATGGTATTAGAGAGTCAAGTAGCCTTGAATTATAAAATTAACCATTCAAATCATAAATCAAATGAAATCTAAGGGATGTTTTAAATGTTTGTTAATGTGGATGTGAATGAATATATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATAAAAGGTATAAAGATTAAAGAGCAGATAGACAAAATAGGTAAAAAAATTGAGTTCAAATTCTATTGGCGCCATGAGTAATCCTATTCAAGAACACCCTTACGACCCTTTCCAATCCTTCTCCACTCTCTGTCTCAACAACTCCTCCTCCTCCTCCTCCTCCGCTGTCGACCCTTCACTCTGTTCTTCATGCTTCCGTCCTCACTCTCGCTCCACCGCCACTCCCATGAAACGCCCCTCCCCCACGCCCCCGTCTCAACAACCCTCCACCGCCCCCACTTCCAAGAACCTCCTTCTTGATCATCAACAACCCAATTCCATCCCTTTCTCCAAGATTAATCTCCCCATTCCTTTTCCTCCCTCTGTTTCCCCTCTCCGCCGCTCTCTTTCCGACCCCACCGATGCCTGCAATTTCTCCCCTCCTCCGCCGCATACTCAATCCCCGGCAAAACGGTTATGCCTAAACTCACCACTCCCTCCCCTGCCTCTCCGCCGTACTGTCTCTGACCCAAACCCAAACCCCGCCCCTGAAAAAACTTCCGATTCCCCAATTAAATTTCAGAAAGACAGCCCTGACTCGAAGGTTTGTTTGTTTGATGTATAAGATTTCCTTACATTTGTTTCATATTTCTCTTCTTCCCCCCCCCCCCCCCCCCCCCCCCCGCACCCCCCCCTTTTTAAGAACAATAAACATAAATGGGTTTTCTGTGTATTTAATTTAATTCTTTCTTGGGAAAACAGAGGCTGAGAAGAATTAAGGATCGACTGAAGGAGATGAATAAGTGGTGGAACGAAGTAATGAGTGAAGAAGAAAAACACGATGATGAAATGGAGACGAAAAAGGTATGGTTTTTGTTTTAATTATTTCATTTTTTTGGTTGGTGGAATGGTTTGTAAATTGGGTATTTAAAATACAGAGAGACAATGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAAAAGATGATGAAGAAACAGTGGGAGTGGAAAGAGTTGGAGATTCAATGACACTAAAATTGAAGTGCTCATGTGGGAAGCGATTTGAGATTCTTCTATCTGGTAGAAACTGCTTCTACAAATTGTTGTAGTTCCAACTTTTTTTTTTTTTTGTACATAATTGATTTGGTTTGAAAAGCCTAATAAAATGATGGATAAGTACAATTACACATTTGTTAACAAAGTAATAATAATATGAAATATCGTATTTCAAGC

mRNA sequence

ATGCAAATTGAGGACATGAGATTTGAACATGGACTTTTGTCGTTAGATATACAGATGAACTATAATATGAGGCTGAGAAGAATTAAGGATCGACTGAAGGAGATGAATAAGTGGTGGAACGAAGTAATGAGTGAAGAAGAAAAACACGATGATGAAATGGAGACGAAAAAGAGAGACAATGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAAAAGATGATGAAGAAACAGTGGGAGTGGAAAGAGTTGGAGATTCAATGACACTAAAATTGAAGTGCTCATGTGGGAAGCGATTTGAGATTCTTCTATCTGGTAGAAACTGCTTCTACAAATTGTTGTAGTTCCAACTTTTTTTTTTTTTTGTACATAATTGATTTGGTTTGAAAAGCCTAATAAAATGATGGATAAGTACAATTACACATTTGTTAACAAAGTAATAATAATATGAAATATCGTATTTCAAGC

Coding sequence (CDS)

ATGCAAATTGAGGACATGAGATTTGAACATGGACTTTTGTCGTTAGATATACAGATGAACTATAATATGAGGCTGAGAAGAATTAAGGATCGACTGAAGGAGATGAATAAGTGGTGGAACGAAGTAATGAGTGAAGAAGAAAAACACGATGATGAAATGGAGACGAAAAAGAGAGACAATGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAAAAGATGATGAAGAAACAGTGGGAGTGGAAAGAGTTGGAGATTCAATGACACTAAAATTGAAGTGCTCATGTGGGAAGCGATTTGAGATTCTTCTATCTGGTAGAAACTGCTTCTACAAATTGTTGTAG

Protein sequence

MQIEDMRFEHGLLSLDIQMNYNMRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEKEKDDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL
Homology
BLAST of MELO3C003414 vs. NCBI nr
Match: XP_011652649.2 (histone H3.v1 [Cucumis sativus] >KAE8651441.1 hypothetical protein Csa_001330 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEKEKDDEETVGVERV 83
           RL+RIKDRLKEMN WWNEVMSEEE+H+DE E KKRD+EEEEEEEEE+EKDDEETVGVERV
Sbjct: 166 RLKRIKDRLKEMNHWWNEVMSEEEEHNDEKEIKKRDDEEEEEEEEEEEKDDEETVGVERV 225

Query: 84  GDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           GDSMTLKLKCSCGKRF+ILLSGRNCFYKLL
Sbjct: 226 GDSMTLKLKCSCGKRFDILLSGRNCFYKLL 255

BLAST of MELO3C003414 vs. NCBI nr
Match: XP_038888901.1 (uncharacterized protein LOC120078676 [Benincasa hispida])

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-21
Identity = 68/90 (75.56%), Postives = 73/90 (81.11%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEKEKDDEETVGVERV 83
           RLRRIKDRLKEMN+WWNEVMSEE+   DE ETKK D  +EEEE       DEETVGVERV
Sbjct: 165 RLRRIKDRLKEMNQWWNEVMSEEQ---DENETKKSDCLKEEEE-------DEETVGVERV 224

Query: 84  GDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           GDS+ L LKCSCGK FEILLSGR+CFYKLL
Sbjct: 225 GDSLALHLKCSCGKGFEILLSGRSCFYKLL 244

BLAST of MELO3C003414 vs. NCBI nr
Match: KAG6606253.1 (hypothetical protein SDJN03_03570, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036195.1 hypothetical protein SDJN02_02996, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 101.3 bits (251), Expect = 5.7e-18
Identity = 62/93 (66.67%), Postives = 77/93 (82.80%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEE---KEKDDEETVGV 83
           RLR+IKDRLKEMN+WWNEVMSE+E H++E    KRD + E +++ E   +E+D+EETVGV
Sbjct: 178 RLRKIKDRLKEMNEWWNEVMSEQE-HEEE----KRDEKNETKKKVECCKEEEDEEETVGV 237

Query: 84  ERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           ERVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 238 ERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 265

BLAST of MELO3C003414 vs. NCBI nr
Match: XP_022930994.1 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-17
Identity = 61/92 (66.30%), Postives = 76/92 (82.61%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEE--EKEKDDEETVGVE 83
           RLR+IKDRLKEMN+WWNEVMSE+E H++E    KRD  E ++  E  ++++D+EETVGVE
Sbjct: 178 RLRKIKDRLKEMNEWWNEVMSEQE-HEEE----KRDENETKKVVECCKEDEDEEETVGVE 237

Query: 84  RVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           RVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 238 RVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 264

BLAST of MELO3C003414 vs. NCBI nr
Match: XP_023533801.1 (proline-, glutamic acid- and leucine-rich protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-17
Identity = 61/92 (66.30%), Postives = 76/92 (82.61%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEE--EKEKDDEETVGVE 83
           RLR+IKDRLKEMN+WW EVMSE+E H++E    KRD  E +++ E  ++E+D+EETVGVE
Sbjct: 194 RLRKIKDRLKEMNEWWKEVMSEQE-HEEE----KRDENETKKKVECCKEEEDEEETVGVE 253

Query: 84  RVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           RVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 254 RVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 280

BLAST of MELO3C003414 vs. ExPASy TrEMBL
Match: A0A0A0LI25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902250 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 7.7e-29
Identity = 81/101 (80.20%), Postives = 86/101 (85.15%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKK-----------RDNEEEEEEEEEKEK 83
           RL+RIKDRLKEMN WWNEVMSEEE+H+DE E KK           RD+EEEEEEEEE EK
Sbjct: 166 RLKRIKDRLKEMNHWWNEVMSEEEEHNDEKEIKKEWFVNGVFEIQRDDEEEEEEEEE-EK 225

Query: 84  DDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           DDEETVGVERVGDSMTLKLKCSCGKRF+ILLSGRNCFYKLL
Sbjct: 226 DDEETVGVERVGDSMTLKLKCSCGKRFDILLSGRNCFYKLL 265

BLAST of MELO3C003414 vs. ExPASy TrEMBL
Match: A0A6J1ET23 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437321 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.0e-17
Identity = 61/92 (66.30%), Postives = 76/92 (82.61%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEE--EKEKDDEETVGVE 83
           RLR+IKDRLKEMN+WWNEVMSE+E H++E    KRD  E ++  E  ++++D+EETVGVE
Sbjct: 178 RLRKIKDRLKEMNEWWNEVMSEQE-HEEE----KRDENETKKVVECCKEDEDEEETVGVE 237

Query: 84  RVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           RVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 238 RVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 264

BLAST of MELO3C003414 vs. ExPASy TrEMBL
Match: A0A6J1JY87 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490841 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.4e-17
Identity = 61/92 (66.30%), Postives = 76/92 (82.61%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEE--EKEKDDEETVGVE 83
           RLR+IK+RLKEMN+WWNEVMSE+E H++E    KRD  E +++ E  + E+D+EETVGVE
Sbjct: 178 RLRKIKNRLKEMNEWWNEVMSEQE-HEEE----KRDENETKKKVECCKDEEDEEETVGVE 237

Query: 84  RVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           RVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 238 RVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 264

BLAST of MELO3C003414 vs. ExPASy TrEMBL
Match: A0A6J1EYB4 (uncharacterized protein LOC111437321 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437321 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.8e-17
Identity = 61/90 (67.78%), Postives = 76/90 (84.44%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEKEKDDEETVGVERV 83
           RLR+IKDRLKEMN+WWNEVMSE+E H++E    KRD E E ++  ++++D+EETVGVERV
Sbjct: 178 RLRKIKDRLKEMNEWWNEVMSEQE-HEEE----KRD-ENETKKCCKEDEDEEETVGVERV 237

Query: 84  GDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           GDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 238 GDSLELRLKCPCGKGFEILLSGTSCFYKLL 261

BLAST of MELO3C003414 vs. ExPASy TrEMBL
Match: A0A6J1K7B1 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490841 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.2e-17
Identity = 61/90 (67.78%), Postives = 75/90 (83.33%), Query Frame = 0

Query: 24  RLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEKEKDDEETVGVERV 83
           RLR+IK+RLKEMN+WWNEVMSE+E H++E    KRD E E ++  + E+D+EETVGVERV
Sbjct: 178 RLRKIKNRLKEMNEWWNEVMSEQE-HEEE----KRD-ENETKKCCKDEEDEEETVGVERV 237

Query: 84  GDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           GDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 238 GDSLELRLKCPCGKGFEILLSGTSCFYKLL 261

BLAST of MELO3C003414 vs. TAIR 10
Match: AT2G32235.1 (unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 11; Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 5.9e-05
Identity = 33/99 (33.33%), Postives = 59/99 (59.60%), Query Frame = 0

Query: 22  NMRLRRIKDRLKEMNKWWNEVMSEEE-------KHDDEMETKKRDNEEEEEEEEEKEKDD 81
           N  L  IKD ++E+++W N+++   E       K DD  +       +E  ++EE+ K+ 
Sbjct: 217 NKMLYIIKDGVRELDQWCNKLLKYGEAVSSGSVKQDDSPKA-----VDEVVQQEEQPKEC 276

Query: 82  EETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 114
           +E V V R+G++  +++ C CG+ ++ L SGR+C+YKLL
Sbjct: 277 KEGVKVNRLGEAFVVEINCPCGRNYQTLFSGRDCYYKLL 310

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011652649.21.8e-3290.00histone H3.v1 [Cucumis sativus] >KAE8651441.1 hypothetical protein Csa_001330 [C... [more]
XP_038888901.12.5e-2175.56uncharacterized protein LOC120078676 [Benincasa hispida][more]
KAG6606253.15.7e-1866.67hypothetical protein SDJN03_03570, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022930994.12.1e-1766.30proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 [Cucurbita m... [more]
XP_023533801.12.1e-1766.30proline-, glutamic acid- and leucine-rich protein 1-like [Cucurbita pepo subsp. ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LI257.7e-2980.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902250 PE=4 SV=1[more]
A0A6J1ET231.0e-1766.30proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita... [more]
A0A6J1JY871.4e-1766.30proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita... [more]
A0A6J1EYB41.8e-1767.78uncharacterized protein LOC111437321 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1K7B15.2e-1767.78proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 OS=Cucurbita... [more]
Match NameE-valueIdentityDescription
AT2G32235.15.9e-0533.33unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003414.1MELO3C003414.1mRNA