Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAGCTGAACACGTCTGCGTCTATGTTCGTGACTCTCTCGACACCAAAAAAACTCGGCTACTTCTTCCAATCTGTCGACATCCCATGGCTCAAAGCTCCCCCCAAGCCTCACAACAAGTCCAAGAAGTCTATCGCTGCTAGCATTGTCCCGTTCGGTGTTGGTGCAGCCCTTGCTGAACCGAAGTCGATACAAGATAGGTGCTGGCATTTGATTGGACTACACTTGGGACATACCAACATAGGTGCATTCAACGGAGTGCTCGAGTATTTTCCTTTAGGTCATAGCCTTCCAAGATATTTACTGAATAACTAA
mRNA sequence
ATGAGAAAGCTGAACACGTCTGCGTCTATGTTCGTGACTCTCTCGACACCAAAAAAACTCGGCTACTTCTTCCAATCTGTCGACATCCCATGGCTCAAAGCTCCCCCCAAGCCTCACAACAAGTCCAAGAAGTCTATCGCTGCTAGCATTGTCCCGTTCGGTGTTGGTGCAGCCCTTGCTGAACCGAAGTCGATACAAGATAGGTGCTGGCATTTGATTGGACTACACTTGGGACATACCAACATAGGTGCATTCAACGGAGTGCTCGAGTATTTTCCTTTAGGTCATAGCCTTCCAAGATATTTACTGAATAACTAA
Coding sequence (CDS)
ATGAGAAAGCTGAACACGTCTGCGTCTATGTTCGTGACTCTCTCGACACCAAAAAAACTCGGCTACTTCTTCCAATCTGTCGACATCCCATGGCTCAAAGCTCCCCCCAAGCCTCACAACAAGTCCAAGAAGTCTATCGCTGCTAGCATTGTCCCGTTCGGTGTTGGTGCAGCCCTTGCTGAACCGAAGTCGATACAAGATAGGTGCTGGCATTTGATTGGACTACACTTGGGACATACCAACATAGGTGCATTCAACGGAGTGCTCGAGTATTTTCCTTTAGGTCATAGCCTTCCAAGATATTTACTGAATAACTAA
Protein sequence
MRKLNTSASMFVTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALAEPKSIQDRCWHLIGLHLGHTNIGAFNGVLEYFPLGHSLPRYLLNN
Homology
BLAST of MELO3C002578 vs. NCBI nr
Match:
KAA0056966.1 (polyphenol oxidase [Cucumis melo var. makuwa] >TYK09748.1 polyphenol oxidase [Cucumis melo var. makuwa])
HSP 1 Score: 222.6 bits (566), Expect = 1.6e-54
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
Query: 1 MRKLNTSASMFVTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALA 60
MRKLNTSASMFVTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALA
Sbjct: 1 MRKLNTSASMFVTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALA 60
Query: 61 EPKSIQDRCWHLIGLHLGHTNIGAFNGVLEYFPLGHSLPRYLLNN 106
EPKSIQDRCWHLIGLHLGHTNIGAFNGVLEYFPLGHSLPRYLLNN
Sbjct: 61 EPKSIQDRCWHLIGLHLGHTNIGAFNGVLEYFPLGHSLPRYLLNN 105
BLAST of MELO3C002578 vs. NCBI nr
Match:
XP_031739004.1 (polyphenol oxidase C, chloroplastic-like [Cucumis sativus] >KGN64653.1 hypothetical protein Csa_013139 [Cucumis sativus])
HSP 1 Score: 75.1 bits (183), Expect = 4.0e-10
Identity = 42/55 (76.36%), Postives = 44/55 (80.00%), Query Frame = 0
Query: 18 KKLGYFFQSVDIPWLKAPPKPHN---KSKKSIAASIVPFGVGAALAE-PKSIQDR 69
KKLGY FQS+DIPWLK+ PKP N KSKKSIAASIVPFGVGAAL E KSI R
Sbjct: 80 KKLGYVFQSIDIPWLKSRPKPLNKKVKSKKSIAASIVPFGVGAALDEKAKSIHLR 134
BLAST of MELO3C002578 vs. NCBI nr
Match:
AKN08990.1 (polyphenol oxidase [Luffa aegyptiaca])
HSP 1 Score: 58.9 bits (141), Expect = 3.0e-05
Identity = 30/50 (60.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 18 KKLGYFFQSVDIPWLKAPPKPHNKSK---KSIAASIVPFGVGAALAEPKS 65
K LGY +Q DIPW+K P NK K K AS VPFGVGAALAEP S
Sbjct: 404 KNLGYVYQDADIPWIKTRPTKRNKPKKKPKKQVASTVPFGVGAALAEPIS 453
BLAST of MELO3C002578 vs. NCBI nr
Match:
TKY59315.1 (Polyphenol oxidase [Spatholobus suberectus])
HSP 1 Score: 55.8 bits (133), Expect = 2.5e-04
Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 0
Query: 12 VTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALAEPKSIQ 67
+ L+ KLGY +Q VDIPWL PKP KSK A FG+GAA A S+Q
Sbjct: 243 IALTQEIKLGYVYQDVDIPWLNNKPKPRRKSKGKKVALAQDFGIGAAQAAEASVQ 297
BLAST of MELO3C002578 vs. NCBI nr
Match:
TKY59313.1 (Polyphenol oxidase [Spatholobus suberectus])
HSP 1 Score: 55.8 bits (133), Expect = 2.5e-04
Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 0
Query: 12 VTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALAEPKSIQ 67
+ L+ KLGY +Q VDIPWL PKP KSK A FG+GAA A S+Q
Sbjct: 243 IALTREIKLGYVYQDVDIPWLNNKPKPRRKSKGKKVALAQDFGIGAAQAAEASVQ 297
BLAST of MELO3C002578 vs. ExPASy TrEMBL
Match:
A0A5D3CEU3 (Polyphenol oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25005G00010 PE=4 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 7.6e-55
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
Query: 1 MRKLNTSASMFVTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALA 60
MRKLNTSASMFVTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALA
Sbjct: 1 MRKLNTSASMFVTLSTPKKLGYFFQSVDIPWLKAPPKPHNKSKKSIAASIVPFGVGAALA 60
Query: 61 EPKSIQDRCWHLIGLHLGHTNIGAFNGVLEYFPLGHSLPRYLLNN 106
EPKSIQDRCWHLIGLHLGHTNIGAFNGVLEYFPLGHSLPRYLLNN
Sbjct: 61 EPKSIQDRCWHLIGLHLGHTNIGAFNGVLEYFPLGHSLPRYLLNN 105
BLAST of MELO3C002578 vs. ExPASy TrEMBL
Match:
A0A0A0LSA5 (PPO1_DWL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073610 PE=4 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10
Identity = 42/55 (76.36%), Postives = 44/55 (80.00%), Query Frame = 0
Query: 18 KKLGYFFQSVDIPWLKAPPKPHN---KSKKSIAASIVPFGVGAALAE-PKSIQDR 69
KKLGY FQS+DIPWLK+ PKP N KSKKSIAASIVPFGVGAAL E KSI R
Sbjct: 80 KKLGYVFQSIDIPWLKSRPKPLNKKVKSKKSIAASIVPFGVGAALDEKAKSIHLR 134
BLAST of MELO3C002578 vs. ExPASy TrEMBL
Match:
A0A0U2D7M5 (Polyphenol oxidase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)
HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05
Identity = 30/50 (60.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 18 KKLGYFFQSVDIPWLKAPPKPHNKSK---KSIAASIVPFGVGAALAEPKS 65
K LGY +Q DIPW+K P NK K K AS VPFGVGAALAEP S
Sbjct: 404 KNLGYVYQDADIPWIKTRPTKRNKPKKKPKKQVASTVPFGVGAALAEPIS 453
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0056966.1 | 1.6e-54 | 100.00 | polyphenol oxidase [Cucumis melo var. makuwa] >TYK09748.1 polyphenol oxidase [Cu... | [more] |
| XP_031739004.1 | 4.0e-10 | 76.36 | polyphenol oxidase C, chloroplastic-like [Cucumis sativus] >KGN64653.1 hypotheti... | [more] |
| AKN08990.1 | 3.0e-05 | 60.00 | polyphenol oxidase [Luffa aegyptiaca] | [more] |
| TKY59315.1 | 2.5e-04 | 49.09 | Polyphenol oxidase [Spatholobus suberectus] | [more] |
| TKY59313.1 | 2.5e-04 | 49.09 | Polyphenol oxidase [Spatholobus suberectus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CEU3 | 7.6e-55 | 100.00 | Polyphenol oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25005... | [more] |
| A0A0A0LSA5 | 2.0e-10 | 76.36 | PPO1_DWL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073610 PE... | [more] |
| A0A0U2D7M5 | 1.4e-05 | 60.00 | Polyphenol oxidase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
