MC11g_new0322 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0322
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 13823985 .. 13824433 (-)
RNA-Seq Expression	MC11g_new0322
Synteny	MC11g_new0322

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCACCAGAGTCAAAGTTACTCGCGTCAATACTTTGGTTACTGCAAATTTGAAGCGGGCAACAAAATGGATCGATGATACTGTTTACAGGCACCGCATGAGGGAGTCATTTGTCATCGGCATAGACTTGAAATTCCACCACCGTAGTCCGGCGGTGCTAACGAGTAATGTGGGAAGTCATTGCCTAGTTTTCCAGTTGCCTTGCGCTAGGTGTATATCCGGGGTACTCAGATCATTGTTGAGTAATCCGTCCAACAAATTTGTTGGACTGGGGGTAGAGAAATATGATCGTCATCTTTGTCTGGCCTATGGATTGCGCATAAGAAATATGGTAGCAGTAAAGAACCGAAAAAATCTCCAGTTGCATCACTTGGCAGAGGAGTTGGGGATTCTGAACGCGACACGAATCGGTGTAATGTGGAATCGCAGAAAGCTAACCAATAA

mRNA sequence

ATGTCTTCCACCAGAGTCAAAGTTACTCGCGTCAATACTTTGGTTACTGCAAATTTGAAGCGGGCAACAAAATGGATCGATGATACTGTTTACAGGCACCGCATGAGGGAGTCATTTGTCATCGGCATAGACTTGAAATTCCACCACCGTAGTCCGGCGGTGCTAACGAGTAATGTGGGAAGTCATTGCCTAGTTTTCCAGTTGCCTTGCGCTAGTAAAGAACCGAAAAAATCTCCAGTTGCATCACTTGGCAGAGGAGTTGGGGATTCTGAACGCGACACGAATCGGTGTAATGTGGAATCGCAGAAAGCTAACCAATAA

Coding sequence (CDS)

ATGTCTTCCACCAGAGTCAAAGTTACTCGCGTCAATACTTTGGTTACTGCAAATTTGAAGCGGGCAACAAAATGGATCGATGATACTGTTTACAGGCACCGCATGAGGGAGTCATTTGTCATCGGCATAGACTTGAAATTCCACCACCGTAGTCCGGCGGTGCTAACGAGTAATGTGGGAAGTCATTGCCTAGTTTTCCAGTTGCCTTGCGCTAGTAAAGAACCGAAAAAATCTCCAGTTGCATCACTTGGCAGAGGAGTTGGGGATTCTGAACGCGACACGAATCGGTGTAATGTGGAATCGCAGAAAGCTAACCAATAA

Protein sequence

MSSTRVKVTRVNTLVTANLKRATKWIDDTVYRHRMRESFVIGIDLKFHHRSPAVLTSNVGSHCLVFQLPCASKEPKKSPVASLGRGVGDSERDTNRCNVESQKANQ

Homology

The following BLAST results are available for this feature:

BLAST of MC11g_new0322 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0322 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0322 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0322 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..89 e-value: 1.7E-5 score: 26.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0322.1	MC11g_new0322.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding