Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCTTCCACCAGAGTCAAAGTTACTCGCGTCAATACTTTGGTTACTGCAAATTTGAAGCGGGCAACAAAATGGATCGATGATACTGTTTACAGGCACCGCATGAGGGAGTCATTTGTCATCGGCATAGACTTGAAATTCCACCACCGTAGTCCGGCGGTGCTAACGAGTAATGTGGGAAGTCATTGCCTAGTTTTCCAGTTGCCTTGCGCTAGGTGTATATCCGGGGTACTCAGATCATTGTTGAGTAATCCGTCCAACAAATTTGTTGGACTGGGGGTAGAGAAATATGATCGTCATCTTTGTCTGGCCTATGGATTGCGCATAAGAAATATGGTAGCAGTAAAGAACCGAAAAAATCTCCAGTTGCATCACTTGGCAGAGGAGTTGGGGATTCTGAACGCGACACGAATCGGTGTAATGTGGAATCGCAGAAAGCTAACCAATAA mRNA sequence ATGTCTTCCACCAGAGTCAAAGTTACTCGCGTCAATACTTTGGTTACTGCAAATTTGAAGCGGGCAACAAAATGGATCGATGATACTGTTTACAGGCACCGCATGAGGGAGTCATTTGTCATCGGCATAGACTTGAAATTCCACCACCGTAGTCCGGCGGTGCTAACGAGTAATGTGGGAAGTCATTGCCTAGTTTTCCAGTTGCCTTGCGCTAGTAAAGAACCGAAAAAATCTCCAGTTGCATCACTTGGCAGAGGAGTTGGGGATTCTGAACGCGACACGAATCGGTGTAATGTGGAATCGCAGAAAGCTAACCAATAA Coding sequence (CDS) ATGTCTTCCACCAGAGTCAAAGTTACTCGCGTCAATACTTTGGTTACTGCAAATTTGAAGCGGGCAACAAAATGGATCGATGATACTGTTTACAGGCACCGCATGAGGGAGTCATTTGTCATCGGCATAGACTTGAAATTCCACCACCGTAGTCCGGCGGTGCTAACGAGTAATGTGGGAAGTCATTGCCTAGTTTTCCAGTTGCCTTGCGCTAGTAAAGAACCGAAAAAATCTCCAGTTGCATCACTTGGCAGAGGAGTTGGGGATTCTGAACGCGACACGAATCGGTGTAATGTGGAATCGCAGAAAGCTAACCAATAA Protein sequence MSSTRVKVTRVNTLVTANLKRATKWIDDTVYRHRMRESFVIGIDLKFHHRSPAVLTSNVGSHCLVFQLPCASKEPKKSPVASLGRGVGDSERDTNRCNVESQKANQ
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR036397 | Ribonuclease H superfamily | GENE3D | 3.30.420.10 | | coord: 1..89
e-value: 1.7E-5
score: 26.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 73..106 |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MC11g_new0322.1-cds | MC11g_new0322.1-cds-MC11:13823985..13824090 | CDS |
| MC11g_new0322.1-cds | MC11g_new0322.1-cds-MC11:13824219..13824433 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MC11g_new0322.1 | MC11g_new0322.1-protein | polypeptide |
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
|
