Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAGTCCGGAGGGAGAACTCAATCAATCTGCCAATCAAGACAGCAACGTCTCTGTTGAATTGGAGCATTCAGTTAGTCAAAATGGTCTTCTCCGGGAAGGAAATGGTATTGCGAATATGAATTTGGGAAACGCTGATACTGTGGCAAAAGGGCTCTCTTCTATGCTTAGCAATATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCGTCTTACTTCAGGCAGGATTATATTTACTTGGTTTGTCTTATTAGCTTTATCATATAAAATAGAATTTTGTACTTCAACTAGTTATAAATTTACAAATATAGCTTTGAAGATTTTGTCACTTGCTAGGTTTAGGGGAAGTTTATGCATCATACATGATATTCTATCATAATTACCTTTTTTCTTGTATTGGATGAAAAAAATGCAGCTTCTGAGTCTCATGGTTTTTTCAACAGTGTGAAAAGTTATTGTTTTAACTTTAACAGAGCTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAATGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGAGTGGATAACATAGATCGGGCTATCGCGATGGGCAATCTA
mRNA sequence
ATGCACAGTCCGGAGGGAGAACTCAATCAATCTGCCAATCAAGACAGCAACGTCTCTGTTGAATTGGAGCATTCAGTTAGTCAAAATGGTCTTCTCCGGGAAGGAAATGGTATTGCGAATATGAATTTGGGAAACGCTGATACTGTGGCAAAAGGGCTCTCTTCTATGCTTAGCAATATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCTTATTGTTTTAACTTTAACAGAGCTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAATGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGAGTGGATAACATAGATCGGGCTATCGCGATGGGCAATCTA
Coding sequence (CDS)
ATGCACAGTCCGGAGGGAGAACTCAATCAATCTGCCAATCAAGACAGCAACGTCTCTGTTGAATTGGAGCATTCAGTTAGTCAAAATGGTCTTCTCCGGGAAGGAAATGGTATTGCGAATATGAATTTGGGAAACGCTGATACTGTGGCAAAAGGGCTCTCTTCTATGCTTAGCAATATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCTTATTGTTTTAACTTTAACAGAGCTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAATGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGAGTGGATAACATAGATCGGGCTATCGCGATGGGCAATCTA
Protein sequence
MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL
Homology
BLAST of MC11g0748 vs. NCBI nr
Match:
XP_022143160.1 (uncharacterized protein LOC111013092 [Momordica charantia] >XP_022143168.1 uncharacterized protein LOC111013092 [Momordica charantia] >XP_022143175.1 uncharacterized protein LOC111013092 [Momordica charantia] >XP_022143183.1 uncharacterized protein LOC111013092 [Momordica charantia])
HSP 1 Score: 248 bits (634), Expect = 3.35e-82
Identity = 137/144 (95.14%), Postives = 139/144 (96.53%), Query Frame = 0
Query: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI
Sbjct: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
Query: 61 IRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLS 120
IRDFDSKADDTLKSQSQLSSSLD + +ELDQLLEDAPFPFIMQHASRISNVRKRVLS
Sbjct: 61 IRDFDSKADDTLKSQSQLSSSLDRLT---SELDQLLEDAPFPFIMQHASRISNVRKRVLS 120
Query: 121 LNSILRSIQRRVDNIDRAIAMGNL 144
LNSILRSIQRRVDNIDRAIAMGNL
Sbjct: 121 LNSILRSIQRRVDNIDRAIAMGNL 141
BLAST of MC11g0748 vs. NCBI nr
Match:
XP_023535159.1 (uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535161.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535162.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 198 bits (503), Expect = 3.02e-62
Identity = 112/143 (78.32%), Postives = 125/143 (87.41%), Query Frame = 0
Query: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
MHSPE L+ AN+DSNVSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1 MHSPEKVLDDPANEDSNVSVELETSISRNGGLQEENDLANTNLENSNALANGLSSMLINI 60
Query: 61 IRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLS 120
IRDFDSKADDTLKSQSQLSSSLD I + ELDQLLEDAPFPFIMQHASRIS+VRKRVLS
Sbjct: 61 IRDFDSKADDTLKSQSQLSSSLDRITI---ELDQLLEDAPFPFIMQHASRISSVRKRVLS 120
Query: 121 LNSILRSIQRRVDNIDRAIAMGN 143
LNSILRSIQRR+DNIDRAI+MGN
Sbjct: 121 LNSILRSIQRRLDNIDRAISMGN 140
BLAST of MC11g0748 vs. NCBI nr
Match:
XP_022976873.1 (uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976874.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976875.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976876.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976877.1 uncharacterized protein LOC111477110 [Cucurbita maxima])
HSP 1 Score: 196 bits (499), Expect = 1.23e-61
Identity = 111/143 (77.62%), Postives = 124/143 (86.71%), Query Frame = 0
Query: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
MHSPE L+ AN+DS+ SVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1 MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 60
Query: 61 IRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLS 120
IRDFDSKADDTLKSQSQLSSSLD I TELDQLLEDAPFPFIMQHASRIS+VRKRVLS
Sbjct: 61 IRDFDSKADDTLKSQSQLSSSLDRIT---TELDQLLEDAPFPFIMQHASRISSVRKRVLS 120
Query: 121 LNSILRSIQRRVDNIDRAIAMGN 143
LNSILRSIQRR+DNIDRAI+MGN
Sbjct: 121 LNSILRSIQRRLDNIDRAISMGN 140
BLAST of MC11g0748 vs. NCBI nr
Match:
XP_038897522.1 (uncharacterized protein LOC120085558 isoform X6 [Benincasa hispida])
HSP 1 Score: 193 bits (491), Expect = 1.42e-60
Identity = 112/145 (77.24%), Postives = 124/145 (85.52%), Query Frame = 0
Query: 1 MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSN 60
MHSPE + + SAN++SNV ELE S+S NG L+EGN N NLGN++ +A GLSSML N
Sbjct: 1 MHSPEKLDGDYSANEESNVLSELETSISPNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
Query: 61 IIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVL 120
IIRDFDSKADDTLKSQSQLSSSLD + TELDQLLEDAPFPFIMQHASRISNVRKRVL
Sbjct: 61 IIRDFDSKADDTLKSQSQLSSSLDRLT---TELDQLLEDAPFPFIMQHASRISNVRKRVL 120
Query: 121 SLNSILRSIQRRVDNIDRAIAMGNL 144
SLNSILR+IQRRVDNIDRAI+MGNL
Sbjct: 121 SLNSILRTIQRRVDNIDRAISMGNL 142
BLAST of MC11g0748 vs. NCBI nr
Match:
XP_038897521.1 (uncharacterized protein LOC120085558 isoform X5 [Benincasa hispida])
HSP 1 Score: 193 bits (491), Expect = 1.62e-60
Identity = 112/145 (77.24%), Postives = 124/145 (85.52%), Query Frame = 0
Query: 1 MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSN 60
MHSPE + + SAN++SNV ELE S+S NG L+EGN N NLGN++ +A GLSSML N
Sbjct: 1 MHSPEKLDGDYSANEESNVLSELETSISPNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
Query: 61 IIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVL 120
IIRDFDSKADDTLKSQSQLSSSLD + TELDQLLEDAPFPFIMQHASRISNVRKRVL
Sbjct: 61 IIRDFDSKADDTLKSQSQLSSSLDRLT---TELDQLLEDAPFPFIMQHASRISNVRKRVL 120
Query: 121 SLNSILRSIQRRVDNIDRAIAMGNL 144
SLNSILR+IQRRVDNIDRAI+MGNL
Sbjct: 121 SLNSILRTIQRRVDNIDRAISMGNL 142
BLAST of MC11g0748 vs. ExPASy TrEMBL
Match:
A0A6J1CN29 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Momordica charantia OX=3673 GN=LOC111013092 PE=3 SV=1)
HSP 1 Score: 248 bits (634), Expect = 1.62e-82
Identity = 137/144 (95.14%), Postives = 139/144 (96.53%), Query Frame = 0
Query: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI
Sbjct: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
Query: 61 IRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLS 120
IRDFDSKADDTLKSQSQLSSSLD + +ELDQLLEDAPFPFIMQHASRISNVRKRVLS
Sbjct: 61 IRDFDSKADDTLKSQSQLSSSLDRLT---SELDQLLEDAPFPFIMQHASRISNVRKRVLS 120
Query: 121 LNSILRSIQRRVDNIDRAIAMGNL 144
LNSILRSIQRRVDNIDRAIAMGNL
Sbjct: 121 LNSILRSIQRRVDNIDRAIAMGNL 141
BLAST of MC11g0748 vs. ExPASy TrEMBL
Match:
A0A6J1IKP2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111477110 PE=3 SV=1)
HSP 1 Score: 196 bits (499), Expect = 5.94e-62
Identity = 111/143 (77.62%), Postives = 124/143 (86.71%), Query Frame = 0
Query: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
MHSPE L+ AN+DS+ SVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1 MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 60
Query: 61 IRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLS 120
IRDFDSKADDTLKSQSQLSSSLD I TELDQLLEDAPFPFIMQHASRIS+VRKRVLS
Sbjct: 61 IRDFDSKADDTLKSQSQLSSSLDRIT---TELDQLLEDAPFPFIMQHASRISSVRKRVLS 120
Query: 121 LNSILRSIQRRVDNIDRAIAMGN 143
LNSILRSIQRR+DNIDRAI+MGN
Sbjct: 121 LNSILRSIQRRLDNIDRAISMGN 140
BLAST of MC11g0748 vs. ExPASy TrEMBL
Match:
A0A6J1F9C2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)
HSP 1 Score: 193 bits (491), Expect = 1.23e-60
Identity = 111/147 (75.51%), Postives = 125/147 (85.03%), Query Frame = 0
Query: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
MHSPE L+ AN+DS+VSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1 MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60
Query: 61 IRDFDSKADDTLKSQSQLSSSLD----LIVLTLTELDQLLEDAPFPFIMQHASRISNVRK 120
IRDFDSKADDTLKSQSQLSSSLD +I T TELDQLLE APFPFIMQHASRIS+VRK
Sbjct: 61 IRDFDSKADDTLKSQSQLSSSLDRITTVITSTFTELDQLLEAAPFPFIMQHASRISSVRK 120
Query: 121 RVLSLNSILRSIQRRVDNIDRAIAMGN 143
RVLSLNSIL SIQRR+DNIDRAI+MGN
Sbjct: 121 RVLSLNSILGSIQRRLDNIDRAISMGN 147
BLAST of MC11g0748 vs. ExPASy TrEMBL
Match:
A0A6J1FEP4 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)
HSP 1 Score: 192 bits (488), Expect = 2.81e-60
Identity = 110/143 (76.92%), Postives = 123/143 (86.01%), Query Frame = 0
Query: 1 MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
MHSPE L+ AN+DS+VSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1 MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60
Query: 61 IRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLS 120
IRDFDSKADDTLKSQSQLSSSLD I TELDQLLE APFPFIMQHASRIS+VRKRVLS
Sbjct: 61 IRDFDSKADDTLKSQSQLSSSLDRIT---TELDQLLEAAPFPFIMQHASRISSVRKRVLS 120
Query: 121 LNSILRSIQRRVDNIDRAIAMGN 143
LNSIL SIQRR+DNIDRAI+MGN
Sbjct: 121 LNSILGSIQRRLDNIDRAISMGN 140
BLAST of MC11g0748 vs. ExPASy TrEMBL
Match:
A0A1S3BAU4 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucumis melo OX=3656 GN=LOC103487651 PE=3 SV=1)
HSP 1 Score: 188 bits (478), Expect = 8.75e-59
Identity = 110/145 (75.86%), Postives = 121/145 (83.45%), Query Frame = 0
Query: 1 MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSN 60
MH PE + + SAN+DSNVS ELE S+S G L+EGN N NLGN++ +A GLSSML N
Sbjct: 1 MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLIN 60
Query: 61 IIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVL 120
IIRDFDSKADDTLKSQ+ LSSSLD + TELDQLLEDAPFPFIMQHASRISNVRKRVL
Sbjct: 61 IIRDFDSKADDTLKSQNHLSSSLDRLT---TELDQLLEDAPFPFIMQHASRISNVRKRVL 120
Query: 121 SLNSILRSIQRRVDNIDRAIAMGNL 144
SLNSILR+IQRRVDNIDRAI MGNL
Sbjct: 121 SLNSILRTIQRRVDNIDRAITMGNL 142
BLAST of MC11g0748 vs. TAIR 10
Match:
AT1G79070.1 (SNARE-associated protein-related )
HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 59/97 (60.82%), Postives = 79/97 (81.44%), Query Frame = 0
Query: 44 GNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPF 103
G + +A+GLS+ML ++I+DFDSKA DTL SQ +LS SLD +V ELDQLLE+AP PF
Sbjct: 32 GGGEAMARGLSAMLESVIKDFDSKALDTLNSQDELSGSLDRLV---QELDQLLENAPLPF 91
Query: 104 IMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIA 141
I+QHASRIS+V++RV SLN +L+S+QRR+DNID ++
Sbjct: 92 IVQHASRISSVKQRVSSLNLVLKSVQRRIDNIDHMLS 125
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022143160.1 | 3.35e-82 | 95.14 | uncharacterized protein LOC111013092 [Momordica charantia] >XP_022143168.1 uncha... | [more] |
| XP_023535159.1 | 3.02e-62 | 78.32 | uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160.... | [more] |
| XP_022976873.1 | 1.23e-61 | 77.62 | uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976874.1 uncharac... | [more] |
| XP_038897522.1 | 1.42e-60 | 77.24 | uncharacterized protein LOC120085558 isoform X6 [Benincasa hispida] | [more] |
| XP_038897521.1 | 1.62e-60 | 77.24 | uncharacterized protein LOC120085558 isoform X5 [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CN29 | 1.62e-82 | 95.14 | Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Momordica chara... | [more] |
| A0A6J1IKP2 | 5.94e-62 | 77.62 | Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxim... | [more] |
| A0A6J1F9C2 | 1.23e-60 | 75.51 | Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch... | [more] |
| A0A6J1FEP4 | 2.81e-60 | 76.92 | Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch... | [more] |
| A0A1S3BAU4 | 8.75e-59 | 75.86 | Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucumis melo OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G79070.1 | 1.0e-25 | 60.82 | SNARE-associated protein-related | [more] |
