Sequences
The following sequences are available for this feature:
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGATCCGGTGCCGGCGACTCTGTTCAAGGCAGCGCCATTGCCGGGAGTAGAGGCTGGCGACGGAGCCTGTGACGGAGGGTTTGCGATCGAAGTTTCAGGAGTCGGAGTGGACGCTGGTGAATCTGAAGGAGCTGTAGGAGGAGCAGGTGGAGAAGAAGCCGGCGCCGAAGCTGGTGGTGAAGTTCCAGTGGAAGGAGCGGGAGAGACGCCCGCCGGAGCAGGAGATGAAGACGGTGTCGACGCTGGAGGAGTCGCTACTGCAGTCGGAGGAGCCGCTTTCGGCGACGACGCCGGAGGCGGTTTGGTTGGAGAGGAAGCCGGAGCGGCGCCCGGAGCCTGGCCCAAGGAGCCGGCGACCAAGGCGAATAGCACGAAGAACACGAAAGCGGAGGAAGCCATGGCGGTGAAAAATGCGCAGCGAAGAGAGGAGAATGGAAGAAGA
ATGATAGATCCGGTGCCGGCGACTCTGTTCAAGGCAGCGCCATTGCCGGGAGTAGAGGCTGGCGACGGAGCCTGTGACGGAGGGTTTGCGATCGAAGTTTCAGGAGTCGGAGTGGACGCTGGTGAATCTGAAGGAGCTGTAGGAGGAGCAGGTGGAGAAGAAGCCGGCGCCGAAGCTGGTGGTGAAGTTCCAGTGGAAGGAGCGGGAGAGACGCCCGCCGGAGCAGGAGATGAAGACGGTGTCGACGCTGGAGGAGTCGCTACTGCAGTCGGAGGAGCCGCTTTCGGCGACGACGCCGGAGGCGGTTTGGTTGGAGAGGAAGCCGGAGCGGCGCCCGGAGCCTGGCCCAAGGAGCCGGCGACCAAGGCGAATAGCACGAAGAACACGAAAGCGGAGGAAGCCATGGCGGTGAAAAATGCGCAGCGAAGAGAGGAGAATGGAAGAAGA
ATGATAGATCCGGTGCCGGCGACTCTGTTCAAGGCAGCGCCATTGCCGGGAGTAGAGGCTGGCGACGGAGCCTGTGACGGAGGGTTTGCGATCGAAGTTTCAGGAGTCGGAGTGGACGCTGGTGAATCTGAAGGAGCTGTAGGAGGAGCAGGTGGAGAAGAAGCCGGCGCCGAAGCTGGTGGTGAAGTTCCAGTGGAAGGAGCGGGAGAGACGCCCGCCGGAGCAGGAGATGAAGACGGTGTCGACGCTGGAGGAGTCGCTACTGCAGTCGGAGGAGCCGCTTTCGGCGACGACGCCGGAGGCGGTTTGGTTGGAGAGGAAGCCGGAGCGGCGCCCGGAGCCTGGCCCAAGGAGCCGGCGACCAAGGCGAATAGCACGAAGAACACGAAAGCGGAGGAAGCCATGGCGGTGAAAAATGCGCAGCGAAGAGAGGAGAATGGAAGAAGA
MIDPVPATLFKAAPLPGVEAGDGACDGGFAIEVSGVGVDAGESEGAVGGAGGEEAGAEAGGEVPVEGAGETPAGAGDEDGVDAGGVATAVGGAAFGDDAGGGLVGEEAGAAPGAWPKEPATKANSTKNTKAEEAMAVKNAQRREENGRR
Homology
BLAST of MC11g0578 vs. NCBI nr
Match:
XP_022136125.1 (circumsporozoite protein-like [Momordica charantia])
HSP 1 Score: 265 bits (677), Expect = 1.18e-88
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MC11g0578 vs. NCBI nr
Match:
KGN60236.1 (hypothetical protein Csa_001434 [Cucumis sativus])
HSP 1 Score: 143 bits (361), Expect = 1.06e-40
Identity = 99/146 (67.81%), Postives = 106/146 (72.60%), Query Frame = 0
BLAST of MC11g0578 vs. NCBI nr
Match:
XP_023520820.1 (uncharacterized protein LOC111784314 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 50.8 bits (120), Expect = 3.61e-04
Identity = 42/90 (46.67%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of MC11g0578 vs. ExPASy TrEMBL
Match:
A0A6J1C301 (circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111007891 PE=4 SV=1)
HSP 1 Score: 265 bits (677), Expect = 5.74e-89
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MC11g0578 vs. ExPASy TrEMBL
Match:
A0A0A0LJM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889920 PE=4 SV=1)
HSP 1 Score: 143 bits (361), Expect = 5.14e-41
Identity = 99/146 (67.81%), Postives = 106/146 (72.60%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
XP_022136125.1 1.18e-88 100.00 circumsporozoite protein-like [Momordica charantia] [more] KGN60236.1 1.06e-40 67.81 hypothetical protein Csa_001434 [Cucumis sativus] [more] XP_023520820.1 3.61e-04 46.67 uncharacterized protein LOC111784314 [Cucurbita pepo subsp. pepo] [more]
Match Name E-value Identity Description
A0A6J1C301 5.74e-89 100.00 circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111007891 PE=... [more] A0A0A0LJM1 5.14e-41 67.81 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889920 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
A T G A T A G A T C C G G T G C C G G C G A C T C T G T T C A A G G C A G C G C C A T T G C C G G G A G T A G A G G C T G G C G A C G G A G C C T G T G A C G G A G G G T T T G C G A T C G A A G T T T C A G G A G T C G G A G T G G A C G C T G G T G A A T C T G A A G G A G C T G T A G G A G G A G C A G G T G G A G A A G A A G C C G G C G C C G A A G C T G G T G G T G A A G T T C C A G T G G A A G G A G C G G G A G A G A C G C C C G C C G G A G C A G G A G A T G A A G A C G G T G T C G A C G C T G G A G G A G T C G C T A C T G C A G T C G G A G G A G C C G C T T T C G G C G A C G A C G C C G G A G G C G G T T T G G T T G G A G A G G A A G C C G G A G C G G C G C C C G G A G C C T G G C C C A A G G A G C C G G C G A C C A A G G C G A A T A G C A C G A A G A A C A C G A A A G C G G A G G A A G C C A T G G C G G T G A A A A A T G C G C A G C G A A G A G A G G A G A A T G G A A G A A G A 50 100 150 200 250 300 350 400 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 41..149
Relationships
The following mRNA feature(s) are a part of this gene:
