Homology
BLAST of MC03g_new0173 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 88/304 (28.95%), Postives = 129/304 (42.43%), Query Frame = 0
Query: 6 IPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCTAFVHV 65
+PK FWGEAV TA YLINR PS L F P + T+ VS LK+FGC AF HV
Sbjct: 605 LPKSFWGEAVQTACYLINRSPSVPLAFEIPERVW-----TNKEVSYSHLKVFGCRAFAHV 664
Query: 66 YPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNSVIQGE 125
+ +KLD +SI C+F+GY + GY+ + P +K + D F
Sbjct: 665 PKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF--------------- 724
Query: 126 HYDLESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPEPELQVYSRRARQPERTEIQ 185
ES+ + V + +PS+ + P S E S + QP Q
Sbjct: 725 ---RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSA-ESTTDEVSEQGEQPGEVIEQ 784
Query: 186 STQVQQSQDLNQNPSVLEIAHK-MSEDDRPIAVRKGVRSCTQHPLQYHLSYTNLSPCFKA 245
Q+ + + ++P+ E H+ + +RP V S +Y L + P
Sbjct: 785 GEQLDEGVEEVEHPTQGEEQHQPLRRSERP-----RVESRRYPSTEYVLISDDREP---- 844
Query: 246 FVTSLDQIQTLNSVQEALQRPE---WKATTLEELHALEKNGTWILTDLPQVNAQLVVNGF 305
S++E L PE EE+ +L+KNGT+ L +LP+ L
Sbjct: 845 -----------ESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWV 864
BLAST of MC03g_new0173 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 7.0e-13
Identity = 57/175 (32.57%), Postives = 81/175 (46.29%), Query Frame = 0
Query: 2 LTSH--IPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGC 61
L SH +PK +W A A YLINRLP+ L+ +P Q L P +Y LK+FGC
Sbjct: 618 LLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFG-QPPNY----EKLKVFGC 677
Query: 62 TAFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEH-----Q 121
+ + P N KL+ +S +C F+GYS Q Y C H P + + + F E
Sbjct: 678 ACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFST 737
Query: 122 PYYPNSVIQGEHYDLESQNWDCTPVFPVVTLNLSSESSLVPSSESTPL--STPEP 168
+ S Q + D + NW P L L + L P +++P S+P P
Sbjct: 738 TNFGVSTSQEQRSD-SAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSP 786
BLAST of MC03g_new0173 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 9.2e-13
Identity = 72/242 (29.75%), Postives = 102/242 (42.15%), Query Frame = 0
Query: 2 LTSH--IPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGC 61
L SH IPK +W A A YLINRLP+ L+ +P Q L P + L++FGC
Sbjct: 639 LLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSP-----NYDKLRVFGC 698
Query: 62 TAFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHT----MDDTFFEHQP 121
+ + P N KLD +S +CVFLGYS Q Y C H + + + D+ F
Sbjct: 699 ACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSN 758
Query: 122 YY-----------PNSVIQGEHYDLESQNWDCTPVFPVVTLNLSSESSLVPSSESTPL-- 181
Y +S + H L ++ TPV P + + ++ PSS S P
Sbjct: 759 YLATLSPVQEQRRESSCVWSPHTTLPTR----TPVLPAPSCSDPHHAATPPSSPSAPFRN 818
Query: 182 -----------------STPEPEL--QVYSRRARQPERTEIQ---STQVQQSQDLNQNPS 203
S+PEP Q + QP +T+ Q S Q+ N++PS
Sbjct: 819 SQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPS 871
BLAST of MC03g_new0173 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 68.6 bits (166), Expect = 1.5e-10
Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = 0
Query: 6 IPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCTAFVHV 65
+ K FWGEAVLTATYLINR+PSR L S+ + YL L++FG T +VH+
Sbjct: 605 LDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKH---LRVFGATVYVHI 664
Query: 66 YPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMD 108
+ K D +S K +F+GY N G+K + +KF D
Sbjct: 665 KNKQ-GKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARD 700
BLAST of MC03g_new0173 vs. NCBI nr
Match:
XP_042986936.1 (uncharacterized protein LOC122315184 isoform X3 [Carya illinoinensis])
HSP 1 Score: 276 bits (707), Expect = 1.72e-84
Identity = 156/343 (45.48%), Postives = 207/343 (60.35%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M ++H+PK+FWGEA+LTA YLINR+PSR L F P Q LL +P + L+S +P K+FGC+
Sbjct: 279 MFSTHVPKFFWGEAILTAAYLINRMPSRILNFQNPCQILLESFPNTRLISTIPFKVFGCS 338
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
AFVHV+ Q+ KLD R++KC+FLGYS QKGYKCY P ++F+H+MD TFFE QPY+P S
Sbjct: 339 AFVHVHQQHRDKLDPRALKCIFLGYSPTQKGYKCYSPVTKQFYHSMDVTFFEQQPYFPKS 398
Query: 121 VIQGE-HYDLESQNWDC--TPVF------PVVTLNLSS--------------------ES 180
IQGE ++ E Q WD +P F P +LN S ++
Sbjct: 399 DIQGETNFIQEYQLWDIEESPHFSPNSDQPCPSLNHESIPPQNLFLESPYFLESPPQDQT 458
Query: 181 SLVPSSESTPLSTPEPELQVYSRRARQPERTEIQSTQVQQSQDLNQNPSVLEIA------ 240
+ P + T ST EL YSRR + + E Q ++Q+Q+ + +P E
Sbjct: 459 NNPPQNLDTIQSTKNDELITYSRRRKNQKEME-QEASLEQTQESDPSPRSSEDPSGNYNP 518
Query: 241 HKMSEDDRPIAVRKGVRSCTQHPLQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQRP 300
+ D PIAVRKGVRSCT+HP+ +SY LSP FKAFV +LD IQ N++QEAL P
Sbjct: 519 ETNDDSDFPIAVRKGVRSCTKHPIYTFVSYEGLSPKFKAFVANLDNIQVPNNIQEALSSP 578
Query: 301 EWKATTLEELHALEKNGTWILTDLPQVNAQLVVNGFFRPKTNQ 308
EWK+ EE+HALEKNGTW + +LP + F K N+
Sbjct: 579 EWKSAVYEEIHALEKNGTWEILELPAGKRPVGCKWIFTVKYNE 620
BLAST of MC03g_new0173 vs. NCBI nr
Match:
RVW97655.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 276 bits (705), Expect = 4.18e-83
Identity = 153/343 (44.61%), Postives = 214/343 (62.39%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M+ S++PK WGEAVLTATYLINR+PSR L+F TP Q LL YP++ ++S +P+K+FGCT
Sbjct: 1 MIASNVPKQLWGEAVLTATYLINRMPSRILQFKTPCQILLAAYPSARIISSIPIKVFGCT 60
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
FVH++ SKLD + KC+FLGYS NQKGYKCY P +KF+ +MD TFFE+QP+YP +
Sbjct: 61 TFVHIHKSQRSKLDPTATKCIFLGYSPNQKGYKCYFPTTKKFYTSMDVTFFENQPFYPKT 120
Query: 121 VIQGEHYDL-ESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPE------------- 180
IQGE++ E Q W+ ++ SSL P +++T LS PE
Sbjct: 121 AIQGENWSTDEFQCWETE-----ISTTSPLSSSLPPQTDTT-LSDPENNSLDVPSVTLEL 180
Query: 181 -----PELQVYSRR------ARQPERTEIQSTQVQQSQDLNQNPSV-----------LEI 240
E+ VY RR + P++ ST +Q+Q+L+Q+PS L
Sbjct: 181 TTQGSKEVIVYFRRNLKEKPEKPPQKEPEDSTPPEQNQELDQDPSNPNSQLGNTIYDLNS 240
Query: 241 AHKMSEDDRPIAVRKGVRSCTQHPLQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQR 300
++ + + D+PIA+RKGVRSCTQHP+ H+SY LS F+AF+TSL+ + +++QEALQ+
Sbjct: 241 SNDLDDLDQPIALRKGVRSCTQHPISNHVSYGKLSHNFQAFITSLEDDRIPSNIQEALQQ 300
Query: 301 PEWKATTLEELHALEKNGTWILTDLPQVNAQLVVNGFFRPKTN 307
PEWK EE+ ALEKNGTW +++LP+ + F K N
Sbjct: 301 PEWKTVVQEEIQALEKNGTWEISELPEGKRPVGCKWIFTMKHN 337
BLAST of MC03g_new0173 vs. NCBI nr
Match:
RVW43030.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 267 bits (683), Expect = 5.17e-83
Identity = 147/303 (48.51%), Postives = 194/303 (64.03%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M + ++PK FWG+AVLTA YLINR+P R LKF TP Q+LL +PT+ L+S +P KIFGC+
Sbjct: 100 MFSMNVPKLFWGQAVLTAAYLINRMPYRVLKFQTPCQTLLKSFPTTRLISTVPPKIFGCS 159
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
FVH+ Q+ SKLD RS+KC+FLGYSSNQKGYKCY P +KF+++MD TFFE QPYYP +
Sbjct: 160 VFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKN 219
Query: 121 VIQGEHYDLESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPEPE--LQVYSRRARQ 180
IQGE+ E Q WD L SESS+ + P S +PE + ++ + Q
Sbjct: 220 DIQGENSTQEYQFWD---------LESFSESSITTENHIPPESFNQPESIVDLWDKEHIQ 279
Query: 181 PERTEIQSTQVQQSQDLNQNPSVL--------EIAHKMSED--DRPIAVRKGVRSCTQHP 240
E E +Q + NPS L + ++ D + PIA RKGVRSC QHP
Sbjct: 280 EETEERALSQQTHEAEPGPNPSKLPGNNAPDGSVDSELENDILNMPIAWRKGVRSCIQHP 339
Query: 241 LQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQRPEWKATTLEELHALEKNGTWILTD 291
+ +SY LSP F+AF +S+ +IQ ++QEA + P+WKA EE+ ALEKNGTW +TD
Sbjct: 340 IGNFISYDKLSPTFRAFTSSITEIQVPQNIQEAFKYPKWKAAVDEEVRALEKNGTWEITD 393
BLAST of MC03g_new0173 vs. NCBI nr
Match:
RVW60619.1 (Copia protein [Vitis vinifera])
HSP 1 Score: 276 bits (707), Expect = 1.10e-81
Identity = 147/319 (46.08%), Postives = 210/319 (65.83%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M+ S++PK WGEAVLTATYLINR+PSR L+F TP Q LL YP++ ++S + +K+FGCT
Sbjct: 311 MIASNVPKQLWGEAVLTATYLINRMPSRILQFKTPCQILLAAYPSARIISSILIKVFGCT 370
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
AFVH++ SKLD + KC+FLGYS NQKGYKCY P +KF+ +MD TFFE+QP+YP +
Sbjct: 371 AFVHIHKSQHSKLDPTATKCIFLGYSPNQKGYKCYSPTTKKFYTSMDVTFFENQPFYPKT 430
Query: 121 VIQGEHYDL-ESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPEPELQVYSRRARQP 180
IQGE++ E Q W+ ++ SSL P +++T LS PE + + + P
Sbjct: 431 AIQGENWSTDEFQFWETK-----ISTTSPLSSSLPPQTDTT-LSVPENN-SLDEKPEKPP 490
Query: 181 ERTEIQSTQVQQSQDLNQNPSV-----------LEIAHKMSEDDRPIAVRKGVRSCTQHP 240
++ +T +Q+Q+L+Q+PS L ++ + + D+PIA+RKGVRSCTQHP
Sbjct: 491 QKEPKDNTPPEQNQELDQDPSNPNSQPGNTIYDLNSSNDLDDLDQPIALRKGVRSCTQHP 550
Query: 241 LQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQRPEWKATTLEELHALEKNGTWILTD 300
+ H+SY LS F+AF+TSL+ + +++QEALQ+PEWK EE+ ALEKNGTW +++
Sbjct: 551 ISNHVSYGKLSQNFQAFITSLEDDRIPSNIQEALQQPEWKTAVQEEIQALEKNGTWEISE 610
Query: 301 LPQVNAQLVVNGFFRPKTN 307
LP+ + F K N
Sbjct: 611 LPEGKRPVGCKWIFTVKHN 622
BLAST of MC03g_new0173 vs. NCBI nr
Match:
CAN82505.1 (hypothetical protein VITISV_039312 [Vitis vinifera])
HSP 1 Score: 262 bits (670), Expect = 1.42e-81
Identity = 145/303 (47.85%), Postives = 192/303 (63.37%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M + ++PK FWG+AVLT YLINR+ R LKF TP Q+LL +PT+ L+S +P KIFGC+
Sbjct: 66 MFSMNVPKLFWGQAVLTTAYLINRMSYRVLKFQTPCQTLLKSFPTTRLISTVPPKIFGCS 125
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
FVH+ Q+ SKLD RS+KC+FLGYSSNQKGYKCY P +KF+++MD TFFE QPYYP +
Sbjct: 126 VFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKN 185
Query: 121 VIQGEHYDLESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPEPE--LQVYSRRARQ 180
IQGE+ E Q WD L SESS+ + P S +PE + ++ + Q
Sbjct: 186 DIQGENSTQEYQFWD---------LESFSESSITTENHIPPESFNQPESIVDLWDKEHIQ 245
Query: 181 PERTEIQSTQVQQSQDLNQNPSVL--------EIAHKMSED--DRPIAVRKGVRSCTQHP 240
E E +Q + NPS L + ++ D + PIA RKGVRSC QHP
Sbjct: 246 EETEERALSQQTHEAEPGPNPSKLPGNNAPDGSVDSELENDILNMPIAWRKGVRSCXQHP 305
Query: 241 LQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQRPEWKATTLEELHALEKNGTWILTD 291
+ +SY LSP F+AF +S+ +IQ ++QEA + P+WKA EE+ ALEKNGTW +TD
Sbjct: 306 IGNFISYDKLSPTFRAFTSSITEIQVPXNIQEAFKYPKWKAAVDEEVRALEKNGTWEITD 359
BLAST of MC03g_new0173 vs. ExPASy TrEMBL
Match:
A0A438IM12 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1566 PE=4 SV=1)
HSP 1 Score: 276 bits (705), Expect = 2.02e-83
Identity = 153/343 (44.61%), Postives = 214/343 (62.39%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M+ S++PK WGEAVLTATYLINR+PSR L+F TP Q LL YP++ ++S +P+K+FGCT
Sbjct: 1 MIASNVPKQLWGEAVLTATYLINRMPSRILQFKTPCQILLAAYPSARIISSIPIKVFGCT 60
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
FVH++ SKLD + KC+FLGYS NQKGYKCY P +KF+ +MD TFFE+QP+YP +
Sbjct: 61 TFVHIHKSQRSKLDPTATKCIFLGYSPNQKGYKCYFPTTKKFYTSMDVTFFENQPFYPKT 120
Query: 121 VIQGEHYDL-ESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPE------------- 180
IQGE++ E Q W+ ++ SSL P +++T LS PE
Sbjct: 121 AIQGENWSTDEFQCWETE-----ISTTSPLSSSLPPQTDTT-LSDPENNSLDVPSVTLEL 180
Query: 181 -----PELQVYSRR------ARQPERTEIQSTQVQQSQDLNQNPSV-----------LEI 240
E+ VY RR + P++ ST +Q+Q+L+Q+PS L
Sbjct: 181 TTQGSKEVIVYFRRNLKEKPEKPPQKEPEDSTPPEQNQELDQDPSNPNSQLGNTIYDLNS 240
Query: 241 AHKMSEDDRPIAVRKGVRSCTQHPLQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQR 300
++ + + D+PIA+RKGVRSCTQHP+ H+SY LS F+AF+TSL+ + +++QEALQ+
Sbjct: 241 SNDLDDLDQPIALRKGVRSCTQHPISNHVSYGKLSHNFQAFITSLEDDRIPSNIQEALQQ 300
Query: 301 PEWKATTLEELHALEKNGTWILTDLPQVNAQLVVNGFFRPKTN 307
PEWK EE+ ALEKNGTW +++LP+ + F K N
Sbjct: 301 PEWKTVVQEEIQALEKNGTWEISELPEGKRPVGCKWIFTMKHN 337
BLAST of MC03g_new0173 vs. ExPASy TrEMBL
Match:
A0A438E5W5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_4019 PE=4 SV=1)
HSP 1 Score: 267 bits (683), Expect = 2.50e-83
Identity = 147/303 (48.51%), Postives = 194/303 (64.03%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M + ++PK FWG+AVLTA YLINR+P R LKF TP Q+LL +PT+ L+S +P KIFGC+
Sbjct: 100 MFSMNVPKLFWGQAVLTAAYLINRMPYRVLKFQTPCQTLLKSFPTTRLISTVPPKIFGCS 159
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
FVH+ Q+ SKLD RS+KC+FLGYSSNQKGYKCY P +KF+++MD TFFE QPYYP +
Sbjct: 160 VFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKN 219
Query: 121 VIQGEHYDLESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPEPE--LQVYSRRARQ 180
IQGE+ E Q WD L SESS+ + P S +PE + ++ + Q
Sbjct: 220 DIQGENSTQEYQFWD---------LESFSESSITTENHIPPESFNQPESIVDLWDKEHIQ 279
Query: 181 PERTEIQSTQVQQSQDLNQNPSVL--------EIAHKMSED--DRPIAVRKGVRSCTQHP 240
E E +Q + NPS L + ++ D + PIA RKGVRSC QHP
Sbjct: 280 EETEERALSQQTHEAEPGPNPSKLPGNNAPDGSVDSELENDILNMPIAWRKGVRSCIQHP 339
Query: 241 LQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQRPEWKATTLEELHALEKNGTWILTD 291
+ +SY LSP F+AF +S+ +IQ ++QEA + P+WKA EE+ ALEKNGTW +TD
Sbjct: 340 IGNFISYDKLSPTFRAFTSSITEIQVPQNIQEAFKYPKWKAAVDEEVRALEKNGTWEITD 393
BLAST of MC03g_new0173 vs. ExPASy TrEMBL
Match:
A0A438FKT6 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_360 PE=4 SV=1)
HSP 1 Score: 276 bits (707), Expect = 5.31e-82
Identity = 147/319 (46.08%), Postives = 210/319 (65.83%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M+ S++PK WGEAVLTATYLINR+PSR L+F TP Q LL YP++ ++S + +K+FGCT
Sbjct: 311 MIASNVPKQLWGEAVLTATYLINRMPSRILQFKTPCQILLAAYPSARIISSILIKVFGCT 370
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
AFVH++ SKLD + KC+FLGYS NQKGYKCY P +KF+ +MD TFFE+QP+YP +
Sbjct: 371 AFVHIHKSQHSKLDPTATKCIFLGYSPNQKGYKCYSPTTKKFYTSMDVTFFENQPFYPKT 430
Query: 121 VIQGEHYDL-ESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPEPELQVYSRRARQP 180
IQGE++ E Q W+ ++ SSL P +++T LS PE + + + P
Sbjct: 431 AIQGENWSTDEFQFWETK-----ISTTSPLSSSLPPQTDTT-LSVPENN-SLDEKPEKPP 490
Query: 181 ERTEIQSTQVQQSQDLNQNPSV-----------LEIAHKMSEDDRPIAVRKGVRSCTQHP 240
++ +T +Q+Q+L+Q+PS L ++ + + D+PIA+RKGVRSCTQHP
Sbjct: 491 QKEPKDNTPPEQNQELDQDPSNPNSQPGNTIYDLNSSNDLDDLDQPIALRKGVRSCTQHP 550
Query: 241 LQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQRPEWKATTLEELHALEKNGTWILTD 300
+ H+SY LS F+AF+TSL+ + +++QEALQ+PEWK EE+ ALEKNGTW +++
Sbjct: 551 ISNHVSYGKLSQNFQAFITSLEDDRIPSNIQEALQQPEWKTAVQEEIQALEKNGTWEISE 610
Query: 301 LPQVNAQLVVNGFFRPKTN 307
LP+ + F K N
Sbjct: 611 LPEGKRPVGCKWIFTVKHN 622
BLAST of MC03g_new0173 vs. ExPASy TrEMBL
Match:
A5AR74 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_039312 PE=4 SV=1)
HSP 1 Score: 262 bits (670), Expect = 6.88e-82
Identity = 145/303 (47.85%), Postives = 192/303 (63.37%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M + ++PK FWG+AVLT YLINR+ R LKF TP Q+LL +PT+ L+S +P KIFGC+
Sbjct: 66 MFSMNVPKLFWGQAVLTTAYLINRMSYRVLKFQTPCQTLLKSFPTTRLISTVPPKIFGCS 125
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
FVH+ Q+ SKLD RS+KC+FLGYSSNQKGYKCY P +KF+++MD TFFE QPYYP +
Sbjct: 126 VFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKN 185
Query: 121 VIQGEHYDLESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPEPE--LQVYSRRARQ 180
IQGE+ E Q WD L SESS+ + P S +PE + ++ + Q
Sbjct: 186 DIQGENSTQEYQFWD---------LESFSESSITTENHIPPESFNQPESIVDLWDKEHIQ 245
Query: 181 PERTEIQSTQVQQSQDLNQNPSVL--------EIAHKMSED--DRPIAVRKGVRSCTQHP 240
E E +Q + NPS L + ++ D + PIA RKGVRSC QHP
Sbjct: 246 EETEERALSQQTHEAEPGPNPSKLPGNNAPDGSVDSELENDILNMPIAWRKGVRSCXQHP 305
Query: 241 LQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQRPEWKATTLEELHALEKNGTWILTD 291
+ +SY LSP F+AF +S+ +IQ ++QEA + P+WKA EE+ ALEKNGTW +TD
Sbjct: 306 IGNFISYDKLSPTFRAFTSSITEIQVPXNIQEAFKYPKWKAAVDEEVRALEKNGTWEITD 359
BLAST of MC03g_new0173 vs. ExPASy TrEMBL
Match:
A5C243 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_019561 PE=4 SV=1)
HSP 1 Score: 270 bits (689), Expect = 1.69e-81
Identity = 148/303 (48.84%), Postives = 195/303 (64.36%), Query Frame = 0
Query: 1 MLTSHIPKYFWGEAVLTATYLINRLPSRTLKFSTPLQSLLTIYPTSYLVSQLPLKIFGCT 60
M + ++PK FWG+AVLTA YLINR+PSR LKF TP Q+LL +PT+ L+S +P KIFGC+
Sbjct: 66 MFSMNVPKLFWGQAVLTAAYLINRMPSRVLKFQTPCQTLLKSFPTTRLISTVPPKIFGCS 125
Query: 61 AFVHVYPQNCSKLDARSIKCVFLGYSSNQKGYKCYHPPFQKFFHTMDDTFFEHQPYYPNS 120
FVH+ Q+ SKLD RS+KC+FLGYSSNQKGYKCY P +KF+++MD TFFE QPYYP +
Sbjct: 126 VFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKN 185
Query: 121 VIQGEHYDLESQNWDCTPVFPVVTLNLSSESSLVPSSESTPLSTPEPE--LQVYSRRARQ 180
IQGE+ E Q WD L SES + + P S +PE + ++ + Q
Sbjct: 186 DIQGENSTQEYQFWD---------LESFSESPITTENHIPPESFNQPESIVDLWDKEHIQ 245
Query: 181 PERTEIQSTQVQQSQDLNQNPSVLE--------IAHKMSED--DRPIAVRKGVRSCTQHP 240
E E +Q + NPS L + ++ D + PIA RKGVRSCTQHP
Sbjct: 246 EETEERALSQQTHEAEPGPNPSKLPGNNAPDGTVDSELENDILNMPIAWRKGVRSCTQHP 305
Query: 241 LQYHLSYTNLSPCFKAFVTSLDQIQTLNSVQEALQRPEWKATTLEELHALEKNGTWILTD 291
+ +SY LSP F+AF +S+ +IQ ++QEA + P+WKA EE+ ALEKNGTW +TD
Sbjct: 306 IGNFISYDKLSPTFRAFTSSITEIQVPQNIQEAFKYPKWKAAVDEEVRALEKNGTWEITD 359
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 1.1e-18 | 28.95 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| Q9ZT94 | 7.0e-13 | 32.57 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
| Q94HW2 | 9.2e-13 | 29.75 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
| P04146 | 1.5e-10 | 41.18 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_042986936.1 | 1.72e-84 | 45.48 | uncharacterized protein LOC122315184 isoform X3 [Carya illinoinensis] | [more] |
| RVW97655.1 | 4.18e-83 | 44.61 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| RVW43030.1 | 5.17e-83 | 48.51 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| RVW60619.1 | 1.10e-81 | 46.08 | Copia protein [Vitis vinifera] | [more] |
| CAN82505.1 | 1.42e-81 | 47.85 | hypothetical protein VITISV_039312 [Vitis vinifera] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A438IM12 | 2.02e-83 | 44.61 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A0A438E5W5 | 2.50e-83 | 48.51 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A0A438FKT6 | 5.31e-82 | 46.08 | Copia protein OS=Vitis vinifera OX=29760 GN=GIP_360 PE=4 SV=1 | [more] |
| A5AR74 | 6.88e-82 | 47.85 | Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... | [more] |
| A5C243 | 1.69e-81 | 48.84 | Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
