Lcy02g006740 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGATATCACAGAAACCTCAAATCCTTCCGATTCTTCTGTTCAACCTACAAGTCGATCCATTATTGATCAGTATGATAATCCATATTTTCTACATCATTCCGATAGCACAAATTTGGTTATTGTCTCTGATCCTTTGACCGAATCAAATTATGCCTCATGGAATGGTGCTATGATTCTTGGACTCACCATGAAGAACAAGTTAGGGTTTGTTGATGGTTCTCTTACTCAGCCAATAGGAGATTTGAAAAAGTCGTGGATTATCTGCAACGCGGTTGTCACCGTTTGGATCTCGAACTCTATCTCAAAAGAAATTTCTGCGAGCTTCAATATTACTGATTCTGCGCACGAAATATGGCTCGATCTGCAATAG ATGGTTGATATCACAGAAACCTCAAATCCTTCCGATTCTTCTGTTCAACCTACAAGTCGATCCATTATTGATCAGTATGATAATCCATATTTTCTACATCATTCCGATAGCACAAATTTGGTTATTGTCTCTGATCCTTTGACCGAATCAAATTATGCCTCATGGAATGGTGCTATGATTCTTGGACTCACCATGAAGAACAAGTTAGGGTTTGTTGATGGTTCTCTTACTCAGCCAATAGGAGATTTGAAAAAGTCGTGGATTATCTGCAACGCGGTTGTCACCGTTTGGATCTCGAACTCTATCTCAAAAGAAATTTCTGCGAGCTTCAATATTACTGATTCTGCGCACGAAATATGGCTCGATCTGCAATAG ATGGTTGATATCACAGAAACCTCAAATCCTTCCGATTCTTCTGTTCAACCTACAAGTCGATCCATTATTGATCAGTATGATAATCCATATTTTCTACATCATTCCGATAGCACAAATTTGGTTATTGTCTCTGATCCTTTGACCGAATCAAATTATGCCTCATGGAATGGTGCTATGATTCTTGGACTCACCATGAAGAACAAGTTAGGGTTTGTTGATGGTTCTCTTACTCAGCCAATAGGAGATTTGAAAAAGTCGTGGATTATCTGCAACGCGGTTGTCACCGTTTGGATCTCGAACTCTATCTCAAAAGAAATTTCTGCGAGCTTCAATATTACTGATTCTGCGCACGAAATATGGCTCGATCTGCAATAG MVDITETSNPSDSSVQPTSRSIIDQYDNPYFLHHSDSTNLVIVSDPLTESNYASWNGAMILGLTMKNKLGFVDGSLTQPIGDLKKSWIICNAVVTVWISNSISKEISASFNITDSAHEIWLDLQ Homology
BLAST of Lcy02g006740 vs. ExPASy TrEMBL
Match: A0A6J1DIP8 (uncharacterized protein LOC111020399 OS=Momordica charantia OX=3673 GN=LOC111020399 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 4.3e-33 Identity = 69/102 (67.65%), Postives = 84/102 (82.35%), Query Frame = 0
BLAST of Lcy02g006740 vs. ExPASy TrEMBL
Match: A0A6J1DNP7 (uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022065 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30 Identity = 65/119 (54.62%), Postives = 91/119 (76.47%), Query Frame = 0
BLAST of Lcy02g006740 vs. ExPASy TrEMBL
Match: A0A6J1CMF8 (uncharacterized protein LOC111012468 OS=Momordica charantia OX=3673 GN=LOC111012468 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 7.6e-30 Identity = 64/104 (61.54%), Postives = 83/104 (79.81%), Query Frame = 0
BLAST of Lcy02g006740 vs. ExPASy TrEMBL
Match: A0A6J1DKR8 (uncharacterized protein LOC111021831 OS=Momordica charantia OX=3673 GN=LOC111021831 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.6e-27 Identity = 62/121 (51.24%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of Lcy02g006740 vs. ExPASy TrEMBL
Match: A0A7J0FKC9 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein OS=Actinidia rufa OX=165716 GN=Acr_13g0000100 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.9e-25 Identity = 66/122 (54.10%), Postives = 84/122 (68.85%), Query Frame = 0
BLAST of Lcy02g006740 vs. NCBI nr
Match: XP_038874906.1 (uncharacterized protein LOC120067409 [Benincasa hispida]) HSP 1 Score: 151.0 bits (380), Expect = 6.8e-33 Identity = 74/122 (60.66%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Lcy02g006740 vs. NCBI nr
Match: XP_022152756.1 (uncharacterized protein LOC111020399 [Momordica charantia]) HSP 1 Score: 150.6 bits (379), Expect = 8.9e-33 Identity = 69/102 (67.65%), Postives = 84/102 (82.35%), Query Frame = 0
BLAST of Lcy02g006740 vs. NCBI nr
Match: XP_038902375.1 (uncharacterized protein LOC120089012 [Benincasa hispida]) HSP 1 Score: 148.3 bits (373), Expect = 4.4e-32 Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 0
BLAST of Lcy02g006740 vs. NCBI nr
Match: XP_038887186.1 (uncharacterized protein LOC120077373 [Benincasa hispida]) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30 Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of Lcy02g006740 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia]) HSP 1 Score: 141.7 bits (356), Expect = 4.1e-30 Identity = 65/119 (54.62%), Postives = 91/119 (76.47%), Query Frame = 0
BLAST of Lcy02g006740 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10 Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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