Lag0031255 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAATACTCCTTCTTCATACCCTCGAAAATTAAATGTCGATCTCAAGAATCTTCCTCCAATCAATAATCTGCGCATTGGAAATGGAAATCGCTCCTCAATTCCGGTAAAACTCGGTGGTTTTCCCGCGACTGTGTTCGATTTTCTTTGGAATTCGAAAGGAATTTGATGTTCGAGTTGAAAATTTTCAGGTTAAATTTGAGAAATCCAGGTATATTAGGCGCGTTCCTCAGTTTATGCCCCCGAATCACCGGCCGGAAATGAAGCCCAACGAATACTCTGATTCCGCTCGAGCTCTGAATACGAAGACGGTTCCAGAGGCTTCGTCGGATTCCTTCGATAAAAAGAAAGAGAATAGCCGGGAGATTGCTTCGACTTGTAGTTGCGGACATGGCTCGACCAAAGAAGGTACCGATTCAAACCTAGTTCCTAAACTTGATTGCTGTTTGGATTTCGAAATAGATGATTCCTGTGATTTTTCATCATTTTCATGGATTATTCTTTTCCTTTTCTTCGTTATTTGCTGGTTTTCTTCTAATTGATTGATTTGAAAATGCAATTGAATGTTCATCTCACTTGTATTCCATCAGGAGAAGTCTTTATCGCCCATTTCTCCCCAATCCCTCTCCCACTTCGTCGTCATTAGCATTCGCCAGTAATTTTAACGTGCAGTTACAAACCCAAAAAAGAACAAAGAAAAAAGAAAAAAACAATAAAGGGTTTTCTATGGTAAGTATTTGATCTCAACACCTCCAAAACTGAACTCTGAATTATTTCCCTGATTGTGTTTGAAGATCATCATTACTTCCTTTCTTATTAGAGAGCGGGATGGATGTTATCATCTATATCATTTTTTTTCTTGTTTGTCTTCAATTCTTCTTAGCTGCCTTGTTTTCTAAAAGAAATGAAGTTGTACGTGAATTTTGTATTCCAACTATACAATTAATTTCAACAATAACAGTAACATTATAAATTATCCAATAGAAATCTTTAGTGGCTGAAAGTTGTGAGTATAGTTTTCTAAAGTAGGCCATTAGTTTCTTAAAATAACAAGTTACTCGTTAACCCTCAAGGGGTGACCTGCCCGTAAGAGCTGGAATCTCAAAATCCCACTTCAAATATGTAAATAGAAAACTCACGCCGAGTATGATAACCATTTGGTTTTTGAAAATTATGTTTGTTTTCTTTCAATTTTCTTCCTATGGTTTAAATTCTTAGTCAAATTCCAATAACAAAAACAAGTTTTTTGAAAACTACGGTCCCGTTTGATAACCATTTCATTTTTGGTTTTTGGTTTTTGAAAGTCAAGCCTACAAACACCACTTTTATTCACAAGTTTCTTTGTTTTGTTATCTACAACTTTTCCTTGTTTTCAAAAACCAAGTCAAATTTTGAAAACAAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTAGAATTTGACTTGGAATTCAAATGTGTCGTTGAGAAAGATGAAAACCATTGTAAGGAAATTGGGAAGAAACAAGCATAATTTTCAAAAATCAAAACCAAATAGTTCTCAAACGAGACCTACTTTTTTTAGTTTCAAAACTTGACTTGTTTTTAAAACATGGGAAGAATGTAGATAACAAAACAAAGAAATATAAGTGAAAGTATGGTTTATAAACTTAATTTTTAAACGGAAAATCAAATAGTTATCCAATCTTCCTTAATATTTAAAATCTTTGTTGTCTTTCTCAAAAAAAAAAAAAAAAAAAAAATCTTTGTTGTCTTTTAGAGTTGACTTTGGAGCTGAGCTCCTTGGAGACTAATAGAGTGGGTCCCATTCTCTAGTTACCAATTAAAAGAAAAAACTCAGGAATAAAGACAGACAAAACTAACTTAGTAATCAGGTACTCAAACATGTTTATACCCTTTTTTGTTTGAAAATCGAAAGTGATTTTGAAACTCAACTAGCAAAAAGCACATAGGCTCTTGCACTTTGATGGCTTACTCGAGTATTATCGACACTTCATTTCATTTAACTTGCCTTCCTTATCTCAGCTTGAGTACATTGGCCTTTTCAATTATACTGCTTATTCTGATTCCCATAAAATTTACCATGGCGTTTCAAAAGCACTGTAAATGCTCAGAAATTTCCATTTTGGGTATTCAAAGTTTGCTTTAATGGTATAACTTCACCTTTCCATTTTAGGTAATTCAGAAAAGAGAGCGGCAAAGTCCCTTCTGTTTGAGATTTGCACTGCAAATCACTGGCAGCCTCCCCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCACGTGAAAAAGTAAGCTCAATGACTAATCATCAATATGAGTAAGCGTTAGTAGTTATGAAGGACTAACCCTTAATTCGAGTAACATATAGTGCCAATCTTTCAACACCCTCACAAAAGTGAAGGTATATTTTGGAGTGATTTTGAACCTGACAAAAGTGATTTTAATTATTTCAAAATAACTTATGAACATGTTCTTGGTTCTTGTCTTGTGGATTACTCGCTAAAACTCGAAAAATCTCCATTCTAACACCTACTTTTTGAAGCTTTTCTAACGTTTCTGCCTTTTACCTTCAAAATGGGGATAACTAGATGTCACTATGGATGTTTTTGAGAAGATGAAAGGTTACCAAGAGAGAGCTGTTCAAGTTTCTTTTTAGCTTCAATTTCCTCATTGTTTGGATTTGACATGTTCATAGCCATCTGTGTGCAAACATGAGCTAGAGCATAGATTTGAGAGTATTGATTTCCAAACAGGATTCAATAGAAGCGTTATTTAATGGGATTTTTGCAACTGATGTAAATTTGATTTTGATTTAGGTACAGGTTCAAGGTTATTGTTGAGATGAAGGGAGCTTCTGAAGCAGTTTTGGAATGCTATGGGAACCCTCAAACAAGAAAGAAAGTAGCAGCAGAGCATGCAGCAGAAGGAGCATTATGGTATTTAAAGCATTTGGGATATCGTTCTAAAAGATAA ATGGAGAATACTCCTTCTTCATACCCTCGAAAATTAAATGTCGATCTCAAGAATCTTCCTCCAATCAATAATCTGCGCATTGGAAATGGAAATCGCTCCTCAATTCCGGTTAAATTTGAGAAATCCAGGTATATTAGGCGCGTTCCTCAGTTTATGCCCCCGAATCACCGGCCGGAAATGAAGCCCAACGAATACTCTGATTCCGCTCGAGCTCTGAATACGAAGACGGTTCCAGAGGCTTCGTCGGATTCCTTCGATAAAAAGAAAGAGAATAGCCGGGAGATTGCTTCGACTTGTAGTTGCGGACATGGCTCGACCAAAGAAGGTAATTCAGAAAAGAGAGCGGCAAAGTCCCTTCTGTTTGAGATTTGCACTGCAAATCACTGGCAGCCTCCCCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCACGTGAAAAAGTACAGGTTCAAGGTTATTGTTGAGATGAAGGGAGCTTCTGAAGCAGTTTTGGAATGCTATGGGAACCCTCAAACAAGAAAGAAAGTAGCAGCAGAGCATGCAGCAGAAGGAGCATTATGGTATTTAAAGCATTTGGGATATCGTTCTAAAAGATAA ATGGAGAATACTCCTTCTTCATACCCTCGAAAATTAAATGTCGATCTCAAGAATCTTCCTCCAATCAATAATCTGCGCATTGGAAATGGAAATCGCTCCTCAATTCCGGTTAAATTTGAGAAATCCAGGTATATTAGGCGCGTTCCTCAGTTTATGCCCCCGAATCACCGGCCGGAAATGAAGCCCAACGAATACTCTGATTCCGCTCGAGCTCTGAATACGAAGACGGTTCCAGAGGCTTCGTCGGATTCCTTCGATAAAAAGAAAGAGAATAGCCGGGAGATTGCTTCGACTTGTAGTTGCGGACATGGCTCGACCAAAGAAGGTAATTCAGAAAAGAGAGCGGCAAAGTCCCTTCTGTTTGAGATTTGCACTGCAAATCACTGGCAGCCTCCCCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCACGTGAAAAAGTACAGGTTCAAGGTTATTGTTGAGATGAAGGGAGCTTCTGAAGCAGTTTTGGAATGCTATGGGAACCCTCAAACAAGAAAGAAAGTAGCAGCAGAGCATGCAGCAGAAGGAGCATTATGGTATTTAAAGCATTTGGGATATCGTTCTAAAAGATAA MENTPSSYPRKLNVDLKNLPPINNLRIGNGNRSSIPVKFEKSRYIRRVPQFMPPNHRPEMKPNEYSDSARALNTKTVPEASSDSFDKKKENSREIASTCSCGHGSTKEGNSEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHVKKYRFKVIVEMKGASEAVLECYGNPQTRKKVAAEHAAEGALWYLKHLGYRSKR Homology
BLAST of Lag0031255 vs. NCBI nr
Match: XP_038878793.1 (ribonuclease 3-like protein 1 isoform X3 [Benincasa hispida]) HSP 1 Score: 303.5 bits (776), Expect = 1.3e-78 Identity = 160/205 (78.05%), Postives = 170/205 (82.93%), Query Frame = 0
BLAST of Lag0031255 vs. NCBI nr
Match: XP_038878769.1 (ribonuclease 3-like protein 1 isoform X1 [Benincasa hispida] >XP_038878776.1 ribonuclease 3-like protein 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 303.5 bits (776), Expect = 1.3e-78 Identity = 160/205 (78.05%), Postives = 170/205 (82.93%), Query Frame = 0
BLAST of Lag0031255 vs. NCBI nr
Match: XP_022153429.1 (uncharacterized protein LOC111020939 isoform X1 [Momordica charantia]) HSP 1 Score: 302.8 bits (774), Expect = 2.2e-78 Identity = 155/195 (79.49%), Postives = 166/195 (85.13%), Query Frame = 0
BLAST of Lag0031255 vs. NCBI nr
Match: XP_004152191.1 (uncharacterized protein LOC101212514 [Cucumis sativus] >KGN52916.1 hypothetical protein Csa_014441 [Cucumis sativus]) HSP 1 Score: 299.3 bits (765), Expect = 2.5e-77 Identity = 153/209 (73.21%), Postives = 170/209 (81.34%), Query Frame = 0
BLAST of Lag0031255 vs. NCBI nr
Match: XP_038878786.1 (ribonuclease 3-like protein 1 isoform X2 [Benincasa hispida]) HSP 1 Score: 288.5 bits (737), Expect = 4.4e-74 Identity = 152/194 (78.35%), Postives = 161/194 (82.99%), Query Frame = 0
BLAST of Lag0031255 vs. ExPASy Swiss-Prot
Match: A7LFZ6 (Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL4 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-24 Identity = 48/89 (53.93%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of Lag0031255 vs. ExPASy Swiss-Prot
Match: P84634 (Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 7.4e-24 Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Lag0031255 vs. ExPASy Swiss-Prot
Match: Q9M8N2 (Ribonuclease 3-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RTL1 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 7.6e-21 Identity = 60/187 (32.09%), Postives = 105/187 (56.15%), Query Frame = 0
BLAST of Lag0031255 vs. ExPASy TrEMBL
Match: A0A6J1DJ12 (uncharacterized protein LOC111020939 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020939 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78 Identity = 155/195 (79.49%), Postives = 166/195 (85.13%), Query Frame = 0
BLAST of Lag0031255 vs. ExPASy TrEMBL
Match: A0A0A0KYI7 (DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006230 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.2e-77 Identity = 153/209 (73.21%), Postives = 170/209 (81.34%), Query Frame = 0
BLAST of Lag0031255 vs. ExPASy TrEMBL
Match: A0A5D3E0Z9 (Ribonuclease 3-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001930 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 2.8e-74 Identity = 147/210 (70.00%), Postives = 168/210 (80.00%), Query Frame = 0
BLAST of Lag0031255 vs. ExPASy TrEMBL
Match: A0A1S3BXK0 (uncharacterized protein LOC103494682 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494682 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 2.8e-74 Identity = 147/210 (70.00%), Postives = 168/210 (80.00%), Query Frame = 0
BLAST of Lag0031255 vs. ExPASy TrEMBL
Match: A0A6J1GWD5 (ribonuclease 3-like protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111458030 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.5e-67 Identity = 137/204 (67.16%), Postives = 155/204 (75.98%), Query Frame = 0
BLAST of Lag0031255 vs. TAIR 10
Match: AT5G20320.1 (dicer-like 4 ) HSP 1 Score: 112.1 bits (279), Expect = 5.2e-25 Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Lag0031255 vs. TAIR 10
Match: AT5G20320.2 (dicer-like 4 ) HSP 1 Score: 112.1 bits (279), Expect = 5.2e-25 Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Lag0031255 vs. TAIR 10
Match: AT1G80650.1 (RNAse THREE-like protein 1 ) HSP 1 Score: 102.1 bits (253), Expect = 5.4e-22 Identity = 60/187 (32.09%), Postives = 105/187 (56.15%), Query Frame = 0
BLAST of Lag0031255 vs. TAIR 10
Match: AT4G00420.2 (Double-stranded RNA-binding domain (DsRBD)-containing protein ) HSP 1 Score: 99.4 bits (246), Expect = 3.5e-21 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of Lag0031255 vs. TAIR 10
Match: AT4G00420.3 (Double-stranded RNA-binding domain (DsRBD)-containing protein ) HSP 1 Score: 99.4 bits (246), Expect = 3.5e-21 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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