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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTAGCTTTGCATAAAGCTTTCCGGACGATCCATACCACCGTCGATGCTCCTCAAATTACCAGTTTCGCTCTTCGCGTCCCGAAATATGTAAGTCTTTCCTCCCCAAATCTTCGTTTAATTTTCCATCTGATTTCAATTCTGCTTCAGCATGCTCGTTATATCGATCCGTTCTGGATTTTTGATTTATGGGTTTTGTGTATATATTCGTTTGAGTGATTATAGAATGGTGAATCGGGACTGCCCATTTCATTTCGTCCTTGTGGAATCTTTTGTGGTTTTGGAAGCAGAATCTGTGACAAAAATCACATTGGAAAGCGCCATCATGTTAACGAAAGAGAAATGATAACTATCTAGTGTTCTTCTTAGCAAGTCATTATCCTAATAAGTTGATTTAACAGAAAATTGATTGCTCGATATCTCTCTTTGGAAAATGGGTTATGAATTTAGGATGCCCCCATTTTCATTAAGAAAGCAGTGACATAGATTTCATTAAGTTTCAAGCTCTGTTGGTGACGTGCAATTTTTCTTCATCATTTCAGTGGATGTGATAATTGATAAAGGCTTTGTGGCTAATTTCACGGCAGTTTCAGTGATTGAGATTGGATGCATACTGGATTACTTCTTGGAGACTTTGAAATCTTGAAAAGTTTATCAGTCAAAAATTTGGTTGAAAGTGGATAATACATTATATTTTTATAGCTTTGGTACTTTTCAGTTGTTTAAACTTGGGTGGATATGTTGTACGACATTCTTTCATCACTACTTCGTTAGGAGCATAACTTACTTTAGAAGTTGGTTTTGCTAAATGTTGTGATCTGCTATTTGTTTTCAATTTGTGAATATCTTTTTTTTTTTCTTTTTCACATACACTGTTTACTATGATGCAGTTCACTAAATGTTTCATTTTAGGTAGAGGTGAAATTTGCAGATGGAAGTGTGTTCAATTTGTCAGCTGAATTCTTGAGAATATATAGTCCAGCTGTTGATTCTAAGGTCCGAACAATTGGGGGTGAAAAGGTACTGGAGAAACAACTTTTAGATTCATTTATCTTTCTATCTGAAAATATGCTAATTCATCATAGGCTGGTCAAACAGGAAAATTGGATAGTCCACGTAACAGTAATTATCACCTGCCTAGGATATAAAGATTGAGTTTGGAATGGTTTTTAAGATTAGTGCTTTTAAATAAAACACTTCCTTTTAATGTTTGTGACTTGCGTTTCGACTTTGATTAATCTTTTTTTTAGATAAGCGACTTTGATTAATCTTATAAGACAACTATTTCAACATTTGATTGCCAAGGAAACCAAATAAGTGGCTACCATGATTTTCTTTGAATTATCTCTAAGCCCTTTACATTTTTTATTTTTCATTGGTCTTGATGATCACTAGGCTAACCCATGAAACACTTCTTTTATAAATACTTTTGGAAAACTTATCTAAAAAAAAAAAAAAATACTTTTGGAAAAAACATCAACCTTTCACCAGTTCAAAAGTCATACCATACTCACCCTGTACATCCTACAAGTTTTCTAGCCCTTTATAGAGATATCATTAGCCATGTTCTAGAATTACATGTATGGAGTATAATATAAGGGGTGTGCAATGGTTGGCCTTGGCCAAACCTGCTCACTTAGTACAATTTTATGTTTAGCCACATTCTCATGATCTGATGCTTCTGCTGATTTATTAATATCCAGAATATGGGGTGCTTTGTTTATCAGATTCAATCATTAAATGCATGATTTTGAAGTAGGTAATTTCTGGACGGCGTTATGTTGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGTACTTTGAAATTACTGGTTAATATGGGTGCTTCTGAATTCCAACTAATCTTTCTATATTGAATTGCTAGAAAATCTGCACGTACTGTTTTGGTCCTTGAAATTTGATGTTGCTTCAATTTGCTAGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTACCATCTTGGGAGCAACAAATTTACGCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCACGGGCTGAGCCGAGATCCACCAAGGAGAAAATGA mRNA sequence ATGTTAGCTTTGCATAAAGCTTTCCGGACGATCCATACCACCGTCGATGCTCCTCAAATTACCAGTTTCGCTCTTCGCGTCCCGAAATATGTAGAGGTGAAATTTGCAGATGGAAGTGTGTTCAATTTGTCAGCTGAATTCTTGAGAATATATAGTCCAGCTGTTGATTCTAAGGTCCGAACAATTGGGGGTGAAAAGGTAATTTCTGGACGGCGTTATGTTGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTACCATCTTGGGAGCAACAAATTTACGCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCACGGGCTGAGCCGAGATCCACCAAGGAGAAAATGA Coding sequence (CDS) ATGTTAGCTTTGCATAAAGCTTTCCGGACGATCCATACCACCGTCGATGCTCCTCAAATTACCAGTTTCGCTCTTCGCGTCCCGAAATATGTAGAGGTGAAATTTGCAGATGGAAGTGTGTTCAATTTGTCAGCTGAATTCTTGAGAATATATAGTCCAGCTGTTGATTCTAAGGTCCGAACAATTGGGGGTGAAAAGGTAATTTCTGGACGGCGTTATGTTGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTACCATCTTGGGAGCAACAAATTTACGCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCACGGGCTGAGCCGAGATCCACCAAGGAGAAAATGA Protein sequence MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDSKVRTIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
Homology
BLAST of Lag0027524 vs. NCBI nr
Match: XP_022984013.1 (uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima]) HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66 Identity = 125/136 (91.91%), Postives = 133/136 (97.79%), Query Frame = 0
Query: 1 MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDSKVR 60
MLALH+AFRTIHTTVD+PQITSFALR PKYVEVKFADGSVFNLSAEFLR+YSPA D+KVR
Sbjct: 1 MLALHRAFRTIHTTVDSPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60
Query: 61 TIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
+IGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFT LRNYV
Sbjct: 61 SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYV 120
Query: 121 KTLKKHGLSRDPPRRK 137
KTLKKHGLSRDPP+RK
Sbjct: 121 KTLKKHGLSRDPPKRK 136
BLAST of Lag0027524 vs. NCBI nr
Match: XP_022935010.1 (uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata]) HSP 1 Score: 260.8 bits (665), Expect = 6.7e-66 Identity = 124/136 (91.18%), Postives = 132/136 (97.06%), Query Frame = 0
Query: 1 MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDSKVR 60
MLAL +AFRTIHTTVDAPQ+TSFALR PKYVEVKFADGSVFNLSAEFLR+YSPA D+KVR
Sbjct: 1 MLALQRAFRTIHTTVDAPQVTSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60
Query: 61 TIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
+IGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFT LRNYV
Sbjct: 61 SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYV 120
Query: 121 KTLKKHGLSRDPPRRK 137
KTLKKHGLSRDPP+RK
Sbjct: 121 KTLKKHGLSRDPPKRK 136
BLAST of Lag0027524 vs. NCBI nr
Match: XP_022154140.1 (uncharacterized protein LOC111021468 isoform X1 [Momordica charantia]) HSP 1 Score: 258.1 bits (658), Expect = 4.4e-65 Identity = 122/135 (90.37%), Postives = 134/135 (99.26%), Query Frame = 0
Query: 2 LALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDSKVRT 61
+ALH+AFRTIHTTV+AP++TSFALR PK+VEVKFADGS+FNLSAEFLRIYSPAVD+KVR+
Sbjct: 1 MALHRAFRTIHTTVEAPRLTSFALRAPKFVEVKFADGSLFNLSAEFLRIYSPAVDAKVRS 60
Query: 62 IGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVK 121
IGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV+
Sbjct: 61 IGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVR 120
Query: 122 TLKKHGLSRDPPRRK 137
TL+KHGLSRDPPRRK
Sbjct: 121 TLQKHGLSRDPPRRK 135
BLAST of Lag0027524 vs. NCBI nr
Match: KAG7017806.1 (hypothetical protein SDJN02_19672 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 257.7 bits (657), Expect = 5.7e-65 Identity = 124/136 (91.18%), Postives = 131/136 (96.32%), Query Frame = 0
Query: 1 MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDSKVR 60
MLAL +AFRTIHTTVDAPQITSFALR PK VEVKFADGSVFNLSAEFLR+YSPA D+KVR
Sbjct: 1 MLALQRAFRTIHTTVDAPQITSFALRAPKCVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60
Query: 61 TIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
+IGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFT LRNYV
Sbjct: 61 SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYV 120
Query: 121 KTLKKHGLSRDPPRRK 137
KTLKKHGLSRDPP+RK
Sbjct: 121 KTLKKHGLSRDPPKRK 136
BLAST of Lag0027524 vs. NCBI nr
Match: XP_031737737.1 (uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus]) HSP 1 Score: 255.8 bits (652), Expect = 2.2e-64 Identity = 120/136 (88.24%), Postives = 131/136 (96.32%), Query Frame = 0
Query: 1 MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDSKVR 60
ML LH+ FRTIHTT+DAPQIT+FAL PKYVEVKFADGSVFNLSAEFLR+YSPA D+K+R
Sbjct: 68 MLPLHRLFRTIHTTLDAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIR 127
Query: 61 TIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
+IGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYF+HLGSNKFTLLRNYV
Sbjct: 128 SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYV 187
Query: 121 KTLKKHGLSRDPPRRK 137
KTLKKHGLSRDPP+RK
Sbjct: 188 KTLKKHGLSRDPPKRK 203
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022984013.1 | 1.4e-66 | 91.91 | uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima] | [more] |
| XP_022935010.1 | 6.7e-66 | 91.18 | uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata] | [more] |
| XP_022154140.1 | 4.4e-65 | 90.37 | uncharacterized protein LOC111021468 isoform X1 [Momordica charantia] | [more] |
| KAG7017806.1 | 5.7e-65 | 91.18 | hypothetical protein SDJN02_19672 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_031737737.1 | 2.2e-64 | 88.24 | uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR038492 | GBBH-like, N-terminal domain superfamily | GENE3D | 3.30.2020.30 | | coord: 16..110
e-value: 1.0E-17
score: 66.1 |
| IPR010376 | Gamma-butyrobetaine hydroxylase-like, N-terminal | PFAM | PF06155 | GBBH-like_N | coord: 29..105
e-value: 1.3E-19
score: 70.6 |
| None | No IPR available | PANTHER | PTHR35303 | OS02G0197800 PROTEIN | coord: 9..135 |
| None | No IPR available | PANTHER | PTHR35303:SF6 | BNAA06G32170D PROTEIN | coord: 9..135 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0046872 |
metal ion binding |
|
