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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCCAATGTGTCCATGCATTCATCCTTGGTACCTAAGTATGATGAATTAGGTGTTGTTCTCCAATGGGCCGAGAAAATACAACAAACATTTTGTGATAGCTTAACTGATTCTTCTCAGATATCTTTACCAACTGGTTGTCAAATCTCTTTCACACAAAATGATTTGACCAAATTGAAGGCAATATGGGAGAGTTTATCACCAGAGCGTAGATTTATGTTCTCGAAGAAGTATGGTCATATAGCGGATTTGATGTATATTCCAGTGAACCATTTTACTTTAAGGGCTATAGTTCACTTTTGGGATCCAGCTTACTGTTGTTTCTCGTTCGGGTCGTTTTAA mRNA sequence ATGTCCAATGTGTCCATGCATTCATCCTTGGTACCTAAGTATGATGAATTAGGTGTTGTTCTCCAATGGGCCGAGAAAATACAACAAACATTTTGTGATAGCTTAACTGATTCTTCTCAGATATCTTTACCAACTGGTTGTCAAATCTCTTTCACACAAAATGATTTGACCAAATTGAAGGCAATATGGGAGAGTTTATCACCAGAGCGTAGATTTATGTTCTCGAAGAAGTATGGTCATATAGCGGATTTGATGTATATTCCAGTGAACCATTTTACTTTAAGGGCTATAGTTCACTTTTGGGATCCAGCTTACTGTTGTTTCTCGTTCGGGTCGTTTTAA Coding sequence (CDS) ATGTCCAATGTGTCCATGCATTCATCCTTGGTACCTAAGTATGATGAATTAGGTGTTGTTCTCCAATGGGCCGAGAAAATACAACAAACATTTTGTGATAGCTTAACTGATTCTTCTCAGATATCTTTACCAACTGGTTGTCAAATCTCTTTCACACAAAATGATTTGACCAAATTGAAGGCAATATGGGAGAGTTTATCACCAGAGCGTAGATTTATGTTCTCGAAGAAGTATGGTCATATAGCGGATTTGATGTATATTCCAGTGAACCATTTTACTTTAAGGGCTATAGTTCACTTTTGGGATCCAGCTTACTGTTGTTTCTCGTTCGGGTCGTTTTAA Protein sequence MSNVSMHSSLVPKYDELGVVLQWAEKIQQTFCDSLTDSSQISLPTGCQISFTQNDLTKLKAIWESLSPERRFMFSKKYGHIADLMYIPVNHFTLRAIVHFWDPAYCCFSFGSF
Homology
BLAST of Lag0026181 vs. NCBI nr
Match: KAA0066094.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 168.3 bits (425), Expect = 3.8e-38 Identity = 77/112 (68.75%), Postives = 95/112 (84.82%), Query Frame = 0 Query: 1 MSNVSMHSSLVPKYDELGVVLQWAEKIQQTFCDSLTDSSQISLPTGCQISFTQNDLTKLK 60 MSN+SMHSS K+DE VL+WAE++QQ F D + +SSQIS+ + CQ+SFTQNDL LK Sbjct: 1 MSNMSMHSSFESKFDEPSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSFTQNDLANLK 60
Query: 61 AIWESLSPERRFMFSKKYGHIADLMYIPVNHFTLRAIVHFWDPAYCCFSFGS 113 IWE+L+P+RRFMFSKKYGHIA+LMYIPVN+F LRAI++FWDPAY CF+FGS Sbjct: 61 MIWEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFWDPAYGCFTFGS 112
BLAST of Lag0026181 vs. NCBI nr
Match: KAA0060423.1 (uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]) HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37 Identity = 76/112 (67.86%), Postives = 94/112 (83.93%), Query Frame = 0 Query: 1 MSNVSMHSSLVPKYDELGVVLQWAEKIQQTFCDSLTDSSQISLPTGCQISFTQNDLTKLK 60 MSN+SMHSS K+DE VL+WAE++QQ F D + +SSQIS+ + CQ+SFTQNDL LK Sbjct: 1 MSNMSMHSSFESKFDEPSDVLKWAEEMQQKFGDDINNSSQISVLSRCQLSFTQNDLANLK 60
Query: 61 AIWESLSPERRFMFSKKYGHIADLMYIPVNHFTLRAIVHFWDPAYCCFSFGS 113 IWE+L+P+RRFMFSKKYGHI +LMYIPVN+F LRAI++FWDPAY CF+FGS Sbjct: 61 MIWEALTPQRRFMFSKKYGHIVELMYIPVNYFALRAIINFWDPAYGCFTFGS 112
BLAST of Lag0026181 vs. NCBI nr
Match: TYK07552.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 161.4 bits (407), Expect = 4.6e-36 Identity = 74/112 (66.07%), Postives = 93/112 (83.04%), Query Frame = 0 Query: 1 MSNVSMHSSLVPKYDELGVVLQWAEKIQQTFCDSLTDSSQISLPTGCQISFTQNDLTKLK 60 MSN+SMHSS K+DE VL+WAE++QQ F D + +SSQIS+ + CQ+S T+NDL LK Sbjct: 1 MSNMSMHSSFESKFDESSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSSTKNDLANLK 60
Query: 61 AIWESLSPERRFMFSKKYGHIADLMYIPVNHFTLRAIVHFWDPAYCCFSFGS 113 IWE+L+P+RRFMFSKKYGHIA+LMY PVN+F LRAI++FWDPAY CF+FGS Sbjct: 61 MIWEALTPQRRFMFSKKYGHIAELMYKPVNYFALRAIINFWDPAYGCFTFGS 112
BLAST of Lag0026181 vs. NCBI nr
Match: KAA0056623.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 160.6 bits (405), Expect = 7.9e-36 Identity = 74/112 (66.07%), Postives = 93/112 (83.04%), Query Frame = 0 Query: 1 MSNVSMHSSLVPKYDELGVVLQWAEKIQQTFCDSLTDSSQISLPTGCQISFTQNDLTKLK 60 MSN+SMHSS K+DE VL+WAE++QQ F D + +SS+IS+ + CQ+S TQNDL LK Sbjct: 1 MSNISMHSSFESKFDEPSDVLKWAEEMQQKFGDGINNSSKISVLSRCQLSSTQNDLANLK 60
Query: 61 AIWESLSPERRFMFSKKYGHIADLMYIPVNHFTLRAIVHFWDPAYCCFSFGS 113 IWE+L+P+RRFMFSKKYGHIA+LMYI VN+F LRAI++FWDPAY CF+FGS Sbjct: 61 MIWEALTPQRRFMFSKKYGHIAELMYILVNYFALRAIINFWDPAYGCFTFGS 112
BLAST of Lag0026181 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 112.8 bits (281), Expect = 1.9e-21 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0 Query: 1 MSNVSMHSSLVPKYDELGVVLQWAEKIQQTFCDSLTDSSQISLPTGCQISFTQNDLTKLK 60 MSN+S HSS K+DE VL+WAE++QQ F D + +SSQIS+ + CQ+SFTQN L LK Sbjct: 1 MSNMSRHSSFESKFDEPSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSFTQNVLANLK 60
Query: 61 AIWESLSPERRFMFSKKYGHIADLM 86 IWE+L+P+RRFMFSKKYGHIA+L+ Sbjct: 61 MIWEALTPQRRFMFSKKYGHIAELI 85
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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