Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCCCCGCCGTTCAGCCCCGTTTTCTTCGCCGCGCAGCCTCTCACGCCCCCCGTTTTCTTCTTCGTGCAGGTAACACGAGAAGACGCACGCCCCCCGTTTTCTTCTTCGCCTAGGCAACAGGAGTTGTCTCTCCACGCGTCATGCGACCAACCACTGCAAACGTCATCGCCACGCGAATTCCAGCCCTCCAACGAAGCGTTTCGGCTTTTTTTTTTTTTTTTGTTAAGTTTAGCCTCGACCCACTTGATTTCTTCATTTTTCAGCTTATGCCCATGTATTTTGATTTATGTCAGGTTGTAATTTACTCACTTGCTAGAACTGCATCTCAGCAAGGATGAGGGAAGGTTGGCAAGTGGAAAATAAATTTTATGCCAACAAAAAAGTATGAATTGTTCTTTTCTTTCTTCGTTCTCTGAGTTTGTTTTTCTAAAAAATCGGAGTTGCTCCATAAGTTAACAGAATTTTTAACTCAGTTCTAGCAGATTCCTAGGTGCTAGAGTGAAATATTGTGCACAATATGTTATATTGGACAAACTTCAAGTGCACAAAAGTGAATGACTTGTTCTCTTACTCTCAACAATTAGAGTTTTTCCCCTTAATATCTTTTTCTCTTTTTGGACTTTTGTTTCTCTGATCAGGCATCTTATGTGGTGGATTGATTTCTTTCTTTATTGCCCGCGTGTAATATTTCATTTATTTTCATAAAAGTTTGATTTTTCATTTAAAACTGAAAAACATACAAACAGAGGGGTAAAGAGTTTTTTAATGCTTATCGACATGTTTGTAGGTGGGAAAATCCATTGATGGGGTGGACTTCTACTGGGGACCCTTATGCCAATGTAGGGGATTCTACACTGTCTTTTGATAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTAATGCTTCGTTCAACCATTTAG
mRNA sequence
ATGCCCCCCCGCCGTTCAGCCCCGTTTTCTTCGCCGCGCAGCCTCTCACGCCCCCCGTTTTCTTCTTCGTGCAGGTGGGAAAATCCATTGATGGGGTGGACTTCTACTGGGGACCCTTATGCCAATGTAGGGGATTCTACACTGTCTTTTGATAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTAATGCTTCGTTCAACCATTTAG
Coding sequence (CDS)
ATGCCCCCCCGCCGTTCAGCCCCGTTTTCTTCGCCGCGCAGCCTCTCACGCCCCCCGTTTTCTTCTTCGTGCAGGTGGGAAAATCCATTGATGGGGTGGACTTCTACTGGGGACCCTTATGCCAATGTAGGGGATTCTACACTGTCTTTTGATAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTAATGCTTCGTTCAACCATTTAG
Protein sequence
MPPRRSAPFSSPRSLSRPPFSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVVMLRSTI
Homology
BLAST of Lag0006098 vs. NCBI nr
Match:
XP_038881462.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa hispida])
HSP 1 Score: 103.6 bits (257), Expect = 7.6e-19
Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVVMLRST 75
F S+ +WENPLMGWTSTGDPYANVGDS LSFDSEEAAKAFAEKHGWEYVV R T
Sbjct: 78 FMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVQKRHT 132
BLAST of Lag0006098 vs. NCBI nr
Match:
XP_022962977.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >XP_022962978.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >XP_023003205.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima] >XP_023517797.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6594972.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 103.2 bits (256), Expect = 9.9e-19
Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVVMLRST 75
F S+ +WENPLMGWTSTGDPYANVGDS LSFDSEEAAKAFAEKHGWEYVV R T
Sbjct: 78 FMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHT 132
BLAST of Lag0006098 vs. NCBI nr
Match:
KAG7026931.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 103.2 bits (256), Expect = 9.9e-19
Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVVMLRST 75
F S+ +WENPLMGWTSTGDPYANVGDS LSFDSEEAAKAFAEKHGWEYVV R T
Sbjct: 78 FMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHT 132
BLAST of Lag0006098 vs. NCBI nr
Match:
XP_008440406.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis melo] >KAA0036408.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa] >TYK12804.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa])
HSP 1 Score: 102.8 bits (255), Expect = 1.3e-18
Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVVMLRST 75
F S+ +WENPLMGWTSTGDPYANVGDS LSFDSEEAAKAFAEKHGWEYVV R T
Sbjct: 78 FVSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHT 132
BLAST of Lag0006098 vs. NCBI nr
Match:
XP_004141860.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sativus] >KGN48618.1 hypothetical protein Csa_004287 [Cucumis sativus])
HSP 1 Score: 102.8 bits (255), Expect = 1.3e-18
Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVVMLRST 75
F S+ +WENPLMGWTSTGDPYANVGDS LSFDSEEAAKAFAEKHGWEYVV R T
Sbjct: 78 FVSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHT 132
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match:
Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 2.3e-18
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0
Query: 3 PRRSAPFSSPRSLS--RPPFSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFA 62
P R+A S L + F S+ +WENPLMGWTSTGDPYANVGDS L+FDSEEAAK+FA
Sbjct: 59 PARTATQSGSGKLGKWKINFVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFA 118
Query: 63 EKHGWEYVVMLRST 75
E+HGW+Y V +T
Sbjct: 119 ERHGWDYKVKKPNT 132
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match:
Q5XIF3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs4 PE=1 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 1.5e-09
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVV 70
F + RWENPLMGW ST DP +N+ L+F ++E A AFAEKHGW Y V
Sbjct: 101 FDTRERWENPLMGWASTADPLSNM---VLTFSAKEDAVAFAEKHGWSYDV 147
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match:
Q02375 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS4 PE=1 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 9.6e-09
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVV 70
F + RWENPLMGW ST DP +N+ L+F ++E A AFAEK+GW Y V
Sbjct: 101 FDTRERWENPLMGWASTADPLSNL---VLTFSTKEDAVAFAEKNGWSYDV 147
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match:
Q9CXZ1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=3)
HSP 1 Score: 60.1 bits (144), Expect = 1.3e-08
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVV 70
F + RWENPLMGW ST DP +N+ L+F ++E A AFAEK+GW Y V
Sbjct: 101 FDTRERWENPLMGWASTADPLSNM---VLTFSAKEDAIAFAEKNGWSYDV 147
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match:
Q66XS7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gekko japonicus OX=146911 GN=NDUFS4 PE=2 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 2.1e-08
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query: 20 FSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVV 70
F + RWENPLMGW+ST DP +N+ L+F ++E A AFAEK+GW + V
Sbjct: 101 FDTRERWENPLMGWSSTADPLSNL---VLTFSTKEDAVAFAEKNGWSFDV 147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038881462.1 | 7.6e-19 | 85.45 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa ... | [more] |
XP_022962977.1 | 9.9e-19 | 85.45 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur... | [more] |
KAG7026931.1 | 9.9e-19 | 85.45 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucurbita ... | [more] |
XP_008440406.1 | 1.3e-18 | 85.45 | PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial ... | [more] |
XP_004141860.1 | 1.3e-18 | 85.45 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sa... | [more] |
Match Name | E-value | Identity | Description | |
Q9FJW4 | 2.3e-18 | 62.16 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidop... | [more] |
Q5XIF3 | 1.5e-09 | 58.00 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus n... | [more] |
Q02375 | 9.6e-09 | 56.00 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taur... | [more] |
Q9CXZ1 | 1.3e-08 | 56.00 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musc... | [more] |
Q66XS7 | 2.1e-08 | 54.00 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gekko ja... | [more] |