Lag0006098 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCCCCCGCCGTTCAGCCCCGTTTTCTTCGCCGCGCAGCCTCTCACGCCCCCCGTTTTCTTCTTCGTGCAGGTAACACGAGAAGACGCACGCCCCCCGTTTTCTTCTTCGCCTAGGCAACAGGAGTTGTCTCTCCACGCGTCATGCGACCAACCACTGCAAACGTCATCGCCACGCGAATTCCAGCCCTCCAACGAAGCGTTTCGGCTTTTTTTTTTTTTTTTGTTAAGTTTAGCCTCGACCCACTTGATTTCTTCATTTTTCAGCTTATGCCCATGTATTTTGATTTATGTCAGGTTGTAATTTACTCACTTGCTAGAACTGCATCTCAGCAAGGATGAGGGAAGGTTGGCAAGTGGAAAATAAATTTTATGCCAACAAAAAAGTATGAATTGTTCTTTTCTTTCTTCGTTCTCTGAGTTTGTTTTTCTAAAAAATCGGAGTTGCTCCATAAGTTAACAGAATTTTTAACTCAGTTCTAGCAGATTCCTAGGTGCTAGAGTGAAATATTGTGCACAATATGTTATATTGGACAAACTTCAAGTGCACAAAAGTGAATGACTTGTTCTCTTACTCTCAACAATTAGAGTTTTTCCCCTTAATATCTTTTTCTCTTTTTGGACTTTTGTTTCTCTGATCAGGCATCTTATGTGGTGGATTGATTTCTTTCTTTATTGCCCGCGTGTAATATTTCATTTATTTTCATAAAAGTTTGATTTTTCATTTAAAACTGAAAAACATACAAACAGAGGGGTAAAGAGTTTTTTAATGCTTATCGACATGTTTGTAGGTGGGAAAATCCATTGATGGGGTGGACTTCTACTGGGGACCCTTATGCCAATGTAGGGGATTCTACACTGTCTTTTGATAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTAATGCTTCGTTCAACCATTTAG ATGCCCCCCCGCCGTTCAGCCCCGTTTTCTTCGCCGCGCAGCCTCTCACGCCCCCCGTTTTCTTCTTCGTGCAGGTGGGAAAATCCATTGATGGGGTGGACTTCTACTGGGGACCCTTATGCCAATGTAGGGGATTCTACACTGTCTTTTGATAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTAATGCTTCGTTCAACCATTTAG ATGCCCCCCCGCCGTTCAGCCCCGTTTTCTTCGCCGCGCAGCCTCTCACGCCCCCCGTTTTCTTCTTCGTGCAGGTGGGAAAATCCATTGATGGGGTGGACTTCTACTGGGGACCCTTATGCCAATGTAGGGGATTCTACACTGTCTTTTGATAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTAATGCTTCGTTCAACCATTTAG MPPRRSAPFSSPRSLSRPPFSSSCRWENPLMGWTSTGDPYANVGDSTLSFDSEEAAKAFAEKHGWEYVVMLRSTI Homology
BLAST of Lag0006098 vs. NCBI nr
Match: XP_038881462.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa hispida]) HSP 1 Score: 103.6 bits (257), Expect = 7.6e-19 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of Lag0006098 vs. NCBI nr
Match: XP_022962977.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >XP_022962978.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >XP_023003205.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima] >XP_023517797.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6594972.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103.2 bits (256), Expect = 9.9e-19 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of Lag0006098 vs. NCBI nr
Match: KAG7026931.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 103.2 bits (256), Expect = 9.9e-19 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of Lag0006098 vs. NCBI nr
Match: XP_008440406.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis melo] >KAA0036408.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa] >TYK12804.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 102.8 bits (255), Expect = 1.3e-18 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of Lag0006098 vs. NCBI nr
Match: XP_004141860.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sativus] >KGN48618.1 hypothetical protein Csa_004287 [Cucumis sativus]) HSP 1 Score: 102.8 bits (255), Expect = 1.3e-18 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match: Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-18 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match: Q5XIF3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs4 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.5e-09 Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match: Q02375 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS4 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 9.6e-09 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match: Q9CXZ1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=3) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-08 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of Lag0006098 vs. ExPASy Swiss-Prot
Match: Q66XS7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gekko japonicus OX=146911 GN=NDUFS4 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-08 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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