Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCCCACTAGGGCCGCTGCTGTCGTGGGCGAGGCTGGCGGTGGCAGACGTGCACGTCAAGGGGAGGTTGATTCCGGCAAGGACGATGGCGATTGTGAACTGTGGGCAATAACGCACGACAAGAGGGTATGGGCAGAGGCTGATAAGTTCGAGCCAAATCGATTCATGGAAGAGGAAGTGAGTGTGATGGGAAGCGATTTGAGAGGTCGATTGTGGAACGAATGGAGGTCGATAGTGGCGTACGACGACAAATCTGGAACGAAGGGAGGTCGATCTGGAACGAACGGCGACAGATCTGGAACGAAGGGAGGTCGATCGTGGCAGACGACGACAGAGGTAATGCGTGGGTCACGACGACAGCGAACTGAGAGGTCGCTCGTGGTGGTTTGCGACGTGCGTGGAAAGGCCCGAGGACAACGTGATTCGCTGGAGTGA
mRNA sequence
ATGCATCCCACTAGGGCCGCTGCTGTCGTGGGCGAGGCTGGCGGTGGCAGACGTGCACGTCAAGGGGAGGTTGATTCCGGCAAGGACGATGGCGATTGTGAACTGTGGGCAATAACGCACGACAAGAGGGTATGGGCAGAGGCTGATAAGTTCGAGCCAAATCGATTCATGGAAGAGGAAGTGAGTGTGATGGGAAGCGATTTGAGAGGTCGATTGTGGAACGAATGGAGGTCGATAGTGGCGTACGACGACAAATCTGGAACGAAGGGAGGTCGATCTGGAACGAACGGCGACAGATCTGGAACGAAGGGAGGTCGATCGTGGCAGACGACGACAGAGGTAATGCGTGGGTCACGACGACAGCGAACTGAGAGGTCGCTCGTGGTGGTTTGCGACGTGCGTGGAAAGGCCCGAGGACAACGTGATTCGCTGGAGTGA
Coding sequence (CDS)
ATGCATCCCACTAGGGCCGCTGCTGTCGTGGGCGAGGCTGGCGGTGGCAGACGTGCACGTCAAGGGGAGGTTGATTCCGGCAAGGACGATGGCGATTGTGAACTGTGGGCAATAACGCACGACAAGAGGGTATGGGCAGAGGCTGATAAGTTCGAGCCAAATCGATTCATGGAAGAGGAAGTGAGTGTGATGGGAAGCGATTTGAGAGGTCGATTGTGGAACGAATGGAGGTCGATAGTGGCGTACGACGACAAATCTGGAACGAAGGGAGGTCGATCTGGAACGAACGGCGACAGATCTGGAACGAAGGGAGGTCGATCGTGGCAGACGACGACAGAGGTAATGCGTGGGTCACGACGACAGCGAACTGAGAGGTCGCTCGTGGTGGTTTGCGACGTGCGTGGAAAGGCCCGAGGACAACGTGATTCGCTGGAGTGA
Protein sequence
MHPTRAAAVVGEAGGGRRARQGEVDSGKDDGDCELWAITHDKRVWAEADKFEPNRFMEEEVSVMGSDLRGRLWNEWRSIVAYDDKSGTKGGRSGTNGDRSGTKGGRSWQTTTEVMRGSRRQRTERSLVVVCDVRGKARGQRDSLE
Homology
BLAST of Lag0001382 vs. NCBI nr
Match:
XP_023002708.1 (cytochrome P450 78A5-like [Cucurbita maxima])
HSP 1 Score: 70.1 bits (170), Expect = 1.8e-08
Identity = 29/35 (82.86%), Postives = 35/35 (100.00%), Query Frame = 0
Query: 35 LWAITHDKRVWAEADKFEPNRFMEEEVSVMGSDLR 70
+WAITH+++VW+EA+KFEPNRFMEEEVSVMGSDLR
Sbjct: 490 MWAITHNEKVWSEAEKFEPNRFMEEEVSVMGSDLR 524
BLAST of Lag0001382 vs. NCBI nr
Match:
XP_023537799.1 (cytochrome P450 78A5-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 69.3 bits (168), Expect = 3.1e-08
Identity = 29/35 (82.86%), Postives = 34/35 (97.14%), Query Frame = 0
Query: 35 LWAITHDKRVWAEADKFEPNRFMEEEVSVMGSDLR 70
+WAITH+++VW EA+KFEPNRFMEEEVSVMGSDLR
Sbjct: 490 MWAITHNEKVWLEAEKFEPNRFMEEEVSVMGSDLR 524
BLAST of Lag0001382 vs. NCBI nr
Match:
XP_008445440.1 (PREDICTED: cytochrome P450 78A5 [Cucumis melo] >KAA0064774.1 cytochrome P450 78A5 [Cucumis melo var. makuwa])
HSP 1 Score: 68.9 bits (167), Expect = 4.0e-08
Identity = 28/35 (80.00%), Postives = 34/35 (97.14%), Query Frame = 0
Query: 35 LWAITHDKRVWAEADKFEPNRFMEEEVSVMGSDLR 70
+WAITHD++VW +A+KF+PNRFMEEEVSVMGSDLR
Sbjct: 423 MWAITHDEKVWKDAEKFDPNRFMEEEVSVMGSDLR 457
BLAST of Lag0001382 vs. NCBI nr
Match:
XP_004144260.1 (cytochrome P450 78A5 [Cucumis sativus] >KGN47658.1 hypothetical protein Csa_018290 [Cucumis sativus])
HSP 1 Score: 68.6 bits (166), Expect = 5.2e-08
Identity = 27/35 (77.14%), Postives = 34/35 (97.14%), Query Frame = 0
Query: 35 LWAITHDKRVWAEADKFEPNRFMEEEVSVMGSDLR 70
+WAITHD++VW +A+KF+PNRFMEEE+SVMGSDLR
Sbjct: 423 MWAITHDEKVWKDAEKFDPNRFMEEEISVMGSDLR 457
BLAST of Lag0001382 vs. NCBI nr
Match:
XP_022131979.1 (cytochrome P450 78A5 [Momordica charantia])
HSP 1 Score: 68.6 bits (166), Expect = 5.2e-08
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 0
Query: 35 LWAITHDKRVWAEADKFEPNRFMEEEVSVMGSDLR 70
+WAITHD+RVWAE +KF+PNRFM EEVSVMGSDLR
Sbjct: 283 MWAITHDERVWAEPEKFDPNRFMGEEVSVMGSDLR 317
BLAST of Lag0001382 vs. ExPASy Swiss-Prot
Match:
Q9LMX7 (Cytochrome P450 78A5 OS=Arabidopsis thaliana OX=3702 GN=CYP78A5 PE=2 SV=1)
HSP 1 Score: 52.0 bits (123), Expect = 6.6e-06
Identity = 18/35 (51.43%), Postives = 28/35 (80.00%), Query Frame = 0
Query: 35 LWAITHDKRVWAEADKFEPNRFMEEEVSVMGSDLR 70
+W+ITH+ ++W + + F P RF+ E+VS+MGSDLR
Sbjct: 414 MWSITHNAKIWTDPEAFMPERFISEDVSIMGSDLR 448
BLAST of Lag0001382 vs. ExPASy Swiss-Prot
Match:
P48420 (Cytochrome P450 78A1 OS=Zea mays OX=4577 GN=CYP78A1 PE=2 SV=1)
HSP 1 Score: 45.4 bits (106), Expect = 6.2e-04
Identity = 21/39 (53.85%), Postives = 24/39 (61.54%), Query Frame = 0
Query: 35 LWAITHDKRVWAEADKFEPNRFMEEE----VSVMGSDLR 70
+WAITHD VWA+ D F P RF+ E V V G DLR
Sbjct: 441 MWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLR 479
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023002708.1 | 1.8e-08 | 82.86 | cytochrome P450 78A5-like [Cucurbita maxima] | [more] |
| XP_023537799.1 | 3.1e-08 | 82.86 | cytochrome P450 78A5-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_008445440.1 | 4.0e-08 | 80.00 | PREDICTED: cytochrome P450 78A5 [Cucumis melo] >KAA0064774.1 cytochrome P450 78A... | [more] |
| XP_004144260.1 | 5.2e-08 | 77.14 | cytochrome P450 78A5 [Cucumis sativus] >KGN47658.1 hypothetical protein Csa_0182... | [more] |
| XP_022131979.1 | 5.2e-08 | 82.86 | cytochrome P450 78A5 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9LMX7 | 6.6e-06 | 51.43 | Cytochrome P450 78A5 OS=Arabidopsis thaliana OX=3702 GN=CYP78A5 PE=2 SV=1 | [more] |
| P48420 | 6.2e-04 | 53.85 | Cytochrome P450 78A1 OS=Zea mays OX=4577 GN=CYP78A1 PE=2 SV=1 | [more] |
