Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGTACTCTCGACGCACAAAAACGTCGGGAAAAGTAAGAAAATCGCTAGAAAAGGATATGCCAACGTTTTTCGTTGCGTCAGGCCGTACGTCGAGAAAACTGAGTCGAGAGAGGCATCGTCGACGCGTGAACAACACGGCTTTGAGAATGCCTCTCTCGACATCGTGTTTCTCGACGTCGTCGACGACGCTGGGAATACCTTTCTCTACGCTATTTTTGACGACGGAACCGCCGACATCGAGAATGCCTCTTTCGACGTATTTTTTGTCAACTCATATTGTAGCATCGAGAATGATATCTTCCGGCGTCTCGTTGCATCGTGA
mRNA sequence
ATGGGGGTACTCTCGACGCACAAAAACGTCGGGAAAAGTAAGAAAATCGCTAGAAAAGGATATGCCAACGTTTTTCGTTGCGTCAGGCCGTACGTCGAGAAAACTGAGTCGAGAGAGGCATCGTCGACGCGTGAACAACACGGCTTTGAGAATGCCTCTCTCGACATCGTGTTTCTCGACGTCGTCGACGACGCTGGGAATACCTTTCTCTACGCTATTTTTGACGACGGAACCGCCGACATCGAGAATGCCTCTTTCGACGTATTTTTTGTCAACTCATATTGTAGCATCGAGAATGATATCTTCCGGCGTCTCGTTGCATCGTGA
Coding sequence (CDS)
ATGGGGGTACTCTCGACGCACAAAAACGTCGGGAAAAGTAAGAAAATCGCTAGAAAAGGATATGCCAACGTTTTTCGTTGCGTCAGGCCGTACGTCGAGAAAACTGAGTCGAGAGAGGCATCGTCGACGCGTGAACAACACGGCTTTGAGAATGCCTCTCTCGACATCGTGTTTCTCGACGTCGTCGACGACGCTGGGAATACCTTTCTCTACGCTATTTTTGACGACGGAACCGCCGACATCGAGAATGCCTCTTTCGACGTATTTTTTGTCAACTCATATTGTAGCATCGAGAATGATATCTTCCGGCGTCTCGTTGCATCGTGA
Protein sequence
MGVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAGNTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIFRRLVAS
Homology
BLAST of IVF0023575 vs. ExPASy TrEMBL
Match:
A0A5A7T5J5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00030 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 2.8e-20
Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 0
Query: 3 VLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVV 62
VL THKN+ +S+KI KGY +VFR VRPYV KTES EAS TREQH NAS D+VF D V
Sbjct: 10 VLPTHKNIRESEKIVGKGYTDVFRWVRPYVGKTESGEASPTREQHSVGNASPDVVFPDDV 69
Query: 63 DDAGNTFLYAIFDDGTADIENASFDVFFVNSYCSI 98
D NT L +F D T +ENAS DV F+NSY S+
Sbjct: 70 DGVKNTSLDTLFGDETVGVENASPDVIFINSYGSV 104
BLAST of IVF0023575 vs. ExPASy TrEMBL
Match:
A0A5A7UKH4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00210 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 1.7e-17
Identity = 58/103 (56.31%), Postives = 69/103 (66.99%), Query Frame = 0
Query: 7 HKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAG 66
HKNVG+S+KI KGYA++FR V +V K+E EA TR+QHG NAS D+VFLDV+DD
Sbjct: 2 HKNVGESEKIVGKGYADIFRGVGSHVGKSELGEAFLTRDQHGVGNASSDVVFLDVIDDVK 61
Query: 67 -NTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIFRRLVAS 109
NT AIF D I +S DV F +SY SI ND FRR AS
Sbjct: 62 INTSPDAIFGDEITSIGKSSPDVVFSDSYRSIGNDFFRRFCAS 104
BLAST of IVF0023575 vs. ExPASy TrEMBL
Match:
A0A5A7V224 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00470 PE=4 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 6.0e-15
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0
Query: 7 HKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAG 66
HKNVG+S+ I RKGY +VFR V P V K+ES EA TREQHG NAS D+VF D V+
Sbjct: 2 HKNVGESENIVRKGYTDVFRSVGPPVRKSESGEAFLTREQHGIGNASPDVVFPDAVE--- 61
Query: 67 NTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIF 103
NT L +F + T + +S DV F +SY S+ ND F
Sbjct: 62 NTSLDVVFGNETTGVGKSSPDVVFFDSYRSVGNDFF 94
BLAST of IVF0023575 vs. ExPASy TrEMBL
Match:
A0A5D3DSF9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00590 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 7.9e-15
Identity = 54/92 (58.70%), Postives = 59/92 (64.13%), Query Frame = 0
Query: 2 GVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDV 61
GVLSTHKN+ +SKKI +GY +VF V PYV K ES EA ST EQHG NAS D
Sbjct: 11 GVLSTHKNIEESKKIVGEGYVDVFCGVGPYVRKIESGEAFSTHEQHGVGNAS-----PDD 70
Query: 62 VDDAGNTFLYAIFDDGTADIENASFDVFFVNS 94
VD GNT+ AIF D T I N S DVFF NS
Sbjct: 71 VDGVGNTYPDAIFGDQTTGIGNTSPDVFFANS 97
BLAST of IVF0023575 vs. ExPASy TrEMBL
Match:
A0A5A7VC74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2774G00090 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 2.5e-08
Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = 0
Query: 2 GVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDV 61
GVL TH KI KGYA++F V PYV KTES+EA T EQHG NA D+VF D
Sbjct: 119 GVLPTH-------KIVEKGYADIFCGVGPYVGKTESKEAFPTLEQHGIGNAYPDVVFPDD 178
Query: 62 VDDAGNTFLYAIFDDGTADIENASFD 88
D NT ++ D TA + N + D
Sbjct: 179 ADGVENTSPNPVYCDRTAGVRNVTPD 197
BLAST of IVF0023575 vs. NCBI nr
Match:
KAA0037416.1 (hypothetical protein E6C27_scaffold278G001280 [Cucumis melo var. makuwa] >TYJ97498.1 hypothetical protein E5676_scaffold85G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 105 bits (262), Expect = 6.88e-27
Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 0
Query: 3 VLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVV 62
VL THKN+ +S+KI KGY +VFR VRPYV KTES EAS TREQH NAS D+VF D V
Sbjct: 10 VLPTHKNIRESEKIVGKGYTDVFRWVRPYVGKTESGEASPTREQHSVGNASPDVVFPDDV 69
Query: 63 DDAGNTFLYAIFDDGTADIENASFDVFFVNSYCSI 97
D NT L +F D T +ENAS DV F+NSY S+
Sbjct: 70 DGVKNTSLDTLFGDETVGVENASPDVIFINSYGSV 104
BLAST of IVF0023575 vs. NCBI nr
Match:
KAA0055548.1 (hypothetical protein E6C27_scaffold222G00210 [Cucumis melo var. makuwa])
HSP 1 Score: 96.7 bits (239), Expect = 2.27e-23
Identity = 58/103 (56.31%), Postives = 69/103 (66.99%), Query Frame = 0
Query: 7 HKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAG 66
HKNVG+S+KI KGYA++FR V +V K+E EA TR+QHG NAS D+VFLDV+DD
Sbjct: 2 HKNVGESEKIVGKGYADIFRGVGSHVGKSELGEAFLTRDQHGVGNASSDVVFLDVIDDVK 61
Query: 67 -NTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIFRRLVAS 108
NT AIF D I +S DV F +SY SI ND FRR AS
Sbjct: 62 INTSPDAIFGDEITSIGKSSPDVVFSDSYRSIGNDFFRRFCAS 104
BLAST of IVF0023575 vs. NCBI nr
Match:
KAA0060536.1 (hypothetical protein E6C27_scaffold22G003970 [Cucumis melo var. makuwa] >TYK00779.1 hypothetical protein E5676_scaffold420G00470 [Cucumis melo var. makuwa])
HSP 1 Score: 88.2 bits (217), Expect = 3.55e-20
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0
Query: 7 HKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAG 66
HKNVG+S+ I RKGY +VFR V P V K+ES EA TREQHG NAS D+VF D V+
Sbjct: 2 HKNVGESENIVRKGYTDVFRSVGPPVRKSESGEAFLTREQHGIGNASPDVVFPDAVE--- 61
Query: 67 NTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIF 102
NT L +F + T + +S DV F +SY S+ ND F
Sbjct: 62 NTSLDVVFGNETTGVGKSSPDVVFFDSYRSVGNDFF 94
BLAST of IVF0023575 vs. NCBI nr
Match:
KAA0067048.1 (hypothetical protein E6C27_scaffold38G00950 [Cucumis melo var. makuwa] >TYK26285.1 hypothetical protein E5676_scaffold14G00590 [Cucumis melo var. makuwa])
HSP 1 Score: 87.8 bits (216), Expect = 5.77e-20
Identity = 54/92 (58.70%), Postives = 59/92 (64.13%), Query Frame = 0
Query: 2 GVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDV 61
GVLSTHKN+ +SKKI +GY +VF V PYV K ES EA ST EQHG NAS D V
Sbjct: 11 GVLSTHKNIEESKKIVGEGYVDVFCGVGPYVRKIESGEAFSTHEQHGVGNASPDDV---- 70
Query: 62 VDDAGNTFLYAIFDDGTADIENASFDVFFVNS 93
D GNT+ AIF D T I N S DVFF NS
Sbjct: 71 -DGVGNTYPDAIFGDQTTGIGNTSPDVFFANS 97
BLAST of IVF0023575 vs. NCBI nr
Match:
KAA0063199.1 (hypothetical protein E6C27_scaffold205G00060 [Cucumis melo var. makuwa] >TYK23494.1 hypothetical protein E5676_scaffold2774G00090 [Cucumis melo var. makuwa])
HSP 1 Score: 66.2 bits (160), Expect = 3.16e-10
Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = 0
Query: 2 GVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDV 61
GVL THK I KGYA++F V PYV KTES+EA T EQHG NA D+VF D
Sbjct: 119 GVLPTHK-------IVEKGYADIFCGVGPYVGKTESKEAFPTLEQHGIGNAYPDVVFPDD 178
Query: 62 VDDAGNTFLYAIFDDGTADIENASFD 87
D NT ++ D TA + N + D
Sbjct: 179 ADGVENTSPNPVYCDRTAGVRNVTPD 197
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7T5J5 | 2.8e-20 | 61.05 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7UKH4 | 1.7e-17 | 56.31 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7V224 | 6.0e-15 | 53.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3DSF9 | 7.9e-15 | 58.70 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7VC74 | 2.5e-08 | 47.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0037416.1 | 6.88e-27 | 61.05 | hypothetical protein E6C27_scaffold278G001280 [Cucumis melo var. makuwa] >TYJ974... | [more] |
| KAA0055548.1 | 2.27e-23 | 56.31 | hypothetical protein E6C27_scaffold222G00210 [Cucumis melo var. makuwa] | [more] |
| KAA0060536.1 | 3.55e-20 | 53.13 | hypothetical protein E6C27_scaffold22G003970 [Cucumis melo var. makuwa] >TYK0077... | [more] |
| KAA0067048.1 | 5.77e-20 | 58.70 | hypothetical protein E6C27_scaffold38G00950 [Cucumis melo var. makuwa] >TYK26285... | [more] |
| KAA0063199.1 | 3.16e-10 | 47.67 | hypothetical protein E6C27_scaffold205G00060 [Cucumis melo var. makuwa] >TYK2349... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
