IVF0023575 (gene) Melon (IVF77) v1

Overview
NameIVF0023575
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 17130912 .. 17131238 (+)
RNA-Seq ExpressionIVF0023575
SyntenyIVF0023575
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGTACTCTCGACGCACAAAAACGTCGGGAAAAGTAAGAAAATCGCTAGAAAAGGATATGCCAACGTTTTTCGTTGCGTCAGGCCGTACGTCGAGAAAACTGAGTCGAGAGAGGCATCGTCGACGCGTGAACAACACGGCTTTGAGAATGCCTCTCTCGACATCGTGTTTCTCGACGTCGTCGACGACGCTGGGAATACCTTTCTCTACGCTATTTTTGACGACGGAACCGCCGACATCGAGAATGCCTCTTTCGACGTATTTTTTGTCAACTCATATTGTAGCATCGAGAATGATATCTTCCGGCGTCTCGTTGCATCGTGA

mRNA sequence

ATGGGGGTACTCTCGACGCACAAAAACGTCGGGAAAAGTAAGAAAATCGCTAGAAAAGGATATGCCAACGTTTTTCGTTGCGTCAGGCCGTACGTCGAGAAAACTGAGTCGAGAGAGGCATCGTCGACGCGTGAACAACACGGCTTTGAGAATGCCTCTCTCGACATCGTGTTTCTCGACGTCGTCGACGACGCTGGGAATACCTTTCTCTACGCTATTTTTGACGACGGAACCGCCGACATCGAGAATGCCTCTTTCGACGTATTTTTTGTCAACTCATATTGTAGCATCGAGAATGATATCTTCCGGCGTCTCGTTGCATCGTGA

Coding sequence (CDS)

ATGGGGGTACTCTCGACGCACAAAAACGTCGGGAAAAGTAAGAAAATCGCTAGAAAAGGATATGCCAACGTTTTTCGTTGCGTCAGGCCGTACGTCGAGAAAACTGAGTCGAGAGAGGCATCGTCGACGCGTGAACAACACGGCTTTGAGAATGCCTCTCTCGACATCGTGTTTCTCGACGTCGTCGACGACGCTGGGAATACCTTTCTCTACGCTATTTTTGACGACGGAACCGCCGACATCGAGAATGCCTCTTTCGACGTATTTTTTGTCAACTCATATTGTAGCATCGAGAATGATATCTTCCGGCGTCTCGTTGCATCGTGA

Protein sequence

MGVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAGNTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIFRRLVAS
Homology
BLAST of IVF0023575 vs. ExPASy TrEMBL
Match: A0A5A7T5J5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00030 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.8e-20
Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 0

Query: 3   VLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVV 62
           VL THKN+ +S+KI  KGY +VFR VRPYV KTES EAS TREQH   NAS D+VF D V
Sbjct: 10  VLPTHKNIRESEKIVGKGYTDVFRWVRPYVGKTESGEASPTREQHSVGNASPDVVFPDDV 69

Query: 63  DDAGNTFLYAIFDDGTADIENASFDVFFVNSYCSI 98
           D   NT L  +F D T  +ENAS DV F+NSY S+
Sbjct: 70  DGVKNTSLDTLFGDETVGVENASPDVIFINSYGSV 104

BLAST of IVF0023575 vs. ExPASy TrEMBL
Match: A0A5A7UKH4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00210 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.7e-17
Identity = 58/103 (56.31%), Postives = 69/103 (66.99%), Query Frame = 0

Query: 7   HKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAG 66
           HKNVG+S+KI  KGYA++FR V  +V K+E  EA  TR+QHG  NAS D+VFLDV+DD  
Sbjct: 2   HKNVGESEKIVGKGYADIFRGVGSHVGKSELGEAFLTRDQHGVGNASSDVVFLDVIDDVK 61

Query: 67  -NTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIFRRLVAS 109
            NT   AIF D    I  +S DV F +SY SI ND FRR  AS
Sbjct: 62  INTSPDAIFGDEITSIGKSSPDVVFSDSYRSIGNDFFRRFCAS 104

BLAST of IVF0023575 vs. ExPASy TrEMBL
Match: A0A5A7V224 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00470 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.0e-15
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0

Query: 7   HKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAG 66
           HKNVG+S+ I RKGY +VFR V P V K+ES EA  TREQHG  NAS D+VF D V+   
Sbjct: 2   HKNVGESENIVRKGYTDVFRSVGPPVRKSESGEAFLTREQHGIGNASPDVVFPDAVE--- 61

Query: 67  NTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIF 103
           NT L  +F + T  +  +S DV F +SY S+ ND F
Sbjct: 62  NTSLDVVFGNETTGVGKSSPDVVFFDSYRSVGNDFF 94

BLAST of IVF0023575 vs. ExPASy TrEMBL
Match: A0A5D3DSF9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00590 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.9e-15
Identity = 54/92 (58.70%), Postives = 59/92 (64.13%), Query Frame = 0

Query: 2  GVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDV 61
          GVLSTHKN+ +SKKI  +GY +VF  V PYV K ES EA ST EQHG  NAS      D 
Sbjct: 11 GVLSTHKNIEESKKIVGEGYVDVFCGVGPYVRKIESGEAFSTHEQHGVGNAS-----PDD 70

Query: 62 VDDAGNTFLYAIFDDGTADIENASFDVFFVNS 94
          VD  GNT+  AIF D T  I N S DVFF NS
Sbjct: 71 VDGVGNTYPDAIFGDQTTGIGNTSPDVFFANS 97

BLAST of IVF0023575 vs. ExPASy TrEMBL
Match: A0A5A7VC74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2774G00090 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-08
Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = 0

Query: 2   GVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDV 61
           GVL TH       KI  KGYA++F  V PYV KTES+EA  T EQHG  NA  D+VF D 
Sbjct: 119 GVLPTH-------KIVEKGYADIFCGVGPYVGKTESKEAFPTLEQHGIGNAYPDVVFPDD 178

Query: 62  VDDAGNTFLYAIFDDGTADIENASFD 88
            D   NT    ++ D TA + N + D
Sbjct: 179 ADGVENTSPNPVYCDRTAGVRNVTPD 197

BLAST of IVF0023575 vs. NCBI nr
Match: KAA0037416.1 (hypothetical protein E6C27_scaffold278G001280 [Cucumis melo var. makuwa] >TYJ97498.1 hypothetical protein E5676_scaffold85G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (262), Expect = 6.88e-27
Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 0

Query: 3   VLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVV 62
           VL THKN+ +S+KI  KGY +VFR VRPYV KTES EAS TREQH   NAS D+VF D V
Sbjct: 10  VLPTHKNIRESEKIVGKGYTDVFRWVRPYVGKTESGEASPTREQHSVGNASPDVVFPDDV 69

Query: 63  DDAGNTFLYAIFDDGTADIENASFDVFFVNSYCSI 97
           D   NT L  +F D T  +ENAS DV F+NSY S+
Sbjct: 70  DGVKNTSLDTLFGDETVGVENASPDVIFINSYGSV 104

BLAST of IVF0023575 vs. NCBI nr
Match: KAA0055548.1 (hypothetical protein E6C27_scaffold222G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 2.27e-23
Identity = 58/103 (56.31%), Postives = 69/103 (66.99%), Query Frame = 0

Query: 7   HKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAG 66
           HKNVG+S+KI  KGYA++FR V  +V K+E  EA  TR+QHG  NAS D+VFLDV+DD  
Sbjct: 2   HKNVGESEKIVGKGYADIFRGVGSHVGKSELGEAFLTRDQHGVGNASSDVVFLDVIDDVK 61

Query: 67  -NTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIFRRLVAS 108
            NT   AIF D    I  +S DV F +SY SI ND FRR  AS
Sbjct: 62  INTSPDAIFGDEITSIGKSSPDVVFSDSYRSIGNDFFRRFCAS 104

BLAST of IVF0023575 vs. NCBI nr
Match: KAA0060536.1 (hypothetical protein E6C27_scaffold22G003970 [Cucumis melo var. makuwa] >TYK00779.1 hypothetical protein E5676_scaffold420G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 3.55e-20
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0

Query: 7   HKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDVVDDAG 66
           HKNVG+S+ I RKGY +VFR V P V K+ES EA  TREQHG  NAS D+VF D V+   
Sbjct: 2   HKNVGESENIVRKGYTDVFRSVGPPVRKSESGEAFLTREQHGIGNASPDVVFPDAVE--- 61

Query: 67  NTFLYAIFDDGTADIENASFDVFFVNSYCSIENDIF 102
           NT L  +F + T  +  +S DV F +SY S+ ND F
Sbjct: 62  NTSLDVVFGNETTGVGKSSPDVVFFDSYRSVGNDFF 94

BLAST of IVF0023575 vs. NCBI nr
Match: KAA0067048.1 (hypothetical protein E6C27_scaffold38G00950 [Cucumis melo var. makuwa] >TYK26285.1 hypothetical protein E5676_scaffold14G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 5.77e-20
Identity = 54/92 (58.70%), Postives = 59/92 (64.13%), Query Frame = 0

Query: 2  GVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDV 61
          GVLSTHKN+ +SKKI  +GY +VF  V PYV K ES EA ST EQHG  NAS D V    
Sbjct: 11 GVLSTHKNIEESKKIVGEGYVDVFCGVGPYVRKIESGEAFSTHEQHGVGNASPDDV---- 70

Query: 62 VDDAGNTFLYAIFDDGTADIENASFDVFFVNS 93
           D  GNT+  AIF D T  I N S DVFF NS
Sbjct: 71 -DGVGNTYPDAIFGDQTTGIGNTSPDVFFANS 97

BLAST of IVF0023575 vs. NCBI nr
Match: KAA0063199.1 (hypothetical protein E6C27_scaffold205G00060 [Cucumis melo var. makuwa] >TYK23494.1 hypothetical protein E5676_scaffold2774G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 3.16e-10
Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = 0

Query: 2   GVLSTHKNVGKSKKIARKGYANVFRCVRPYVEKTESREASSTREQHGFENASLDIVFLDV 61
           GVL THK       I  KGYA++F  V PYV KTES+EA  T EQHG  NA  D+VF D 
Sbjct: 119 GVLPTHK-------IVEKGYADIFCGVGPYVGKTESKEAFPTLEQHGIGNAYPDVVFPDD 178

Query: 62  VDDAGNTFLYAIFDDGTADIENASFD 87
            D   NT    ++ D TA + N + D
Sbjct: 179 ADGVENTSPNPVYCDRTAGVRNVTPD 197

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T5J52.8e-2061.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UKH41.7e-1756.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V2246.0e-1553.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DSF97.9e-1558.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VC742.5e-0847.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0037416.16.88e-2761.05hypothetical protein E6C27_scaffold278G001280 [Cucumis melo var. makuwa] >TYJ974... [more]
KAA0055548.12.27e-2356.31hypothetical protein E6C27_scaffold222G00210 [Cucumis melo var. makuwa][more]
KAA0060536.13.55e-2053.13hypothetical protein E6C27_scaffold22G003970 [Cucumis melo var. makuwa] >TYK0077... [more]
KAA0067048.15.77e-2058.70hypothetical protein E6C27_scaffold38G00950 [Cucumis melo var. makuwa] >TYK26285... [more]
KAA0063199.13.16e-1047.67hypothetical protein E6C27_scaffold205G00060 [Cucumis melo var. makuwa] >TYK2349... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0023575.1IVF0023575.1mRNA