Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCTGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACAGGCTGAGCTCAAGGACTTCTGTTGTTCGTCCCAAGAAAACGAGAGCGAGAACGCCCCGGACTCAGTTTTCTCATCCTGGGGTAAAAAGCGGTCTCCCGACGGTTTCGTCCTTTTGCTCCGTATTGATCATAAGTCTTTCGATCTTCGGGGCTTGTACTCCGAGGAATTGAACCCACACTTCTGGCATGTTCTCTGA
mRNA sequence
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCTGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACAGGCTGAGCTCAAGGACTTCTGTTGTTCGTCCCAAGAAAACGAGAGCGAGAACGCCCCGGACTCAGTTTTCTCATCCTGGGGTAAAAAGCGGTCTCCCGACGGTTTCGTCCTTTTGCTCCGTATTGATCATAAGTCTTTCGATCTTCGGGGCTTGTACTCCGAGGAATTGAACCCACACTTCTGGCATGTTCTCTGA
Coding sequence (CDS)
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCTGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACAGGCTGAGCTCAAGGACTTCTGTTGTTCGTCCCAAGAAAACGAGAGCGAGAACGCCCCGGACTCAGTTTTCTCATCCTGGGGTAAAAAGCGGTCTCCCGACGGTTTCGTCCTTTTGCTCCGTATTGATCATAAGTCTTTCGATCTTCGGGGCTTGTACTCCGAGGAATTGAACCCACACTTCTGGCATGTTCTCTGA
Protein sequence
MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPDGFVLLLRIDHKSFDLRGLYSEELNPHFWHVL
Homology
BLAST of IVF0018809 vs. ExPASy TrEMBL
Match:
A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 70/89 (78.65%), Postives = 75/89 (84.27%), Query Frame = 0
Query: 1 MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPD 60
MANASNEW+TLV CQKPLEM+LQRRKQ ELKDF CSSQEN S+NAPDS FSSWGKKRSP
Sbjct: 1 MANASNEWQTLVRCQKPLEMYLQRRKQTELKDFWCSSQENASDNAPDSAFSSWGKKRSPY 60
Query: 61 GFVLLLRIDHKSFDLRGLYSEELNPHFWH 90
GF LLRI HKSFDL+G Y E+ N H WH
Sbjct: 61 GFFHLLRIGHKSFDLQGSYYEDFNRHSWH 89
BLAST of IVF0018809 vs. ExPASy TrEMBL
Match:
A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 8.4e-26
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0
Query: 1 MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPD 60
MANASNEWR LV CQKPLEMHLQRRK+ EL+DF CSSQEN SENAPDS FSSWGKKRSPD
Sbjct: 165 MANASNEWRMLVRCQKPLEMHLQRRKRVELEDFRCSSQENVSENAPDSAFSSWGKKRSPD 224
Query: 61 GFVLLLRIDHKS 73
GF LLRI HKS
Sbjct: 225 GFFPLLRIGHKS 236
BLAST of IVF0018809 vs. ExPASy TrEMBL
Match:
A0A5D3CGX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00560 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 62/101 (61.39%), Postives = 70/101 (69.31%), Query Frame = 0
Query: 1 MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQ---------------ENESENA 60
+ NAS EWRTLV CQKPL+MHLQ+RK AEL+DF CSSQ EN SENA
Sbjct: 284 LGNASKEWRTLVRCQKPLKMHLQQRKWAELEDFWCSSQQRKRVELDVFRCSSLENASENA 343
Query: 61 PDSVFSSWGKKRSPDGFVLLLRIDHKSFDLRGLYSEELNPH 87
DSVFSS G+K+ D F LLRI H+SFDLRG YSE+ NPH
Sbjct: 344 LDSVFSSCGEKQFFDDFFPLLRIGHQSFDLRGSYSEDFNPH 384
BLAST of IVF0018809 vs. ExPASy TrEMBL
Match:
A0A5D3E5W4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002550 PE=4 SV=1)
HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 56/75 (74.67%), Postives = 62/75 (82.67%), Query Frame = 0
Query: 1 MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPD 60
M +ASNEWRTLV CQKPLEMHLQ+RK+AEL+DF SQEN SENA + VFSSWGKK SP+
Sbjct: 1 MVDASNEWRTLVRCQKPLEMHLQKRKRAELEDFWSLSQENTSENALNPVFSSWGKKGSPN 60
Query: 61 GFVLLLRIDHKSFDL 76
GF L RI HKSFDL
Sbjct: 61 GFFPLFRIGHKSFDL 75
BLAST of IVF0018809 vs. ExPASy TrEMBL
Match:
A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19
Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 0
Query: 22 LQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPDGFVLLLRIDHKSFDLRGLYSE 81
++RR +A+LKDF CSSQEN SEN DSVFSSW KK +PDGF LLRI HKSFDLRG YSE
Sbjct: 1017 VERRNRADLKDFRCSSQENASENDSDSVFSSWCKKWTPDGFFPLLRIGHKSFDLRGSYSE 1076
Query: 82 ELNPHFWH 90
+ NPH WH
Sbjct: 1077 DFNPHSWH 1084
BLAST of IVF0018809 vs. NCBI nr
Match:
KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 147 bits (371), Expect = 8.09e-39
Identity = 70/89 (78.65%), Postives = 75/89 (84.27%), Query Frame = 0
Query: 1 MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPD 60
MANASNEW+TLV CQKPLEM+LQRRKQ ELKDF CSSQEN S+NAPDS FSSWGKKRSP
Sbjct: 1 MANASNEWQTLVRCQKPLEMYLQRRKQTELKDFWCSSQENASDNAPDSAFSSWGKKRSPY 60
Query: 61 GFVLLLRIDHKSFDLRGLYSEELNPHFWH 89
GF LLRI HKSFDL+G Y E+ N H WH
Sbjct: 61 GFFHLLRIGHKSFDLQGSYYEDFNRHSWH 89
BLAST of IVF0018809 vs. NCBI nr
Match:
TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa])
HSP 1 Score: 124 bits (312), Expect = 7.50e-31
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0
Query: 1 MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPD 60
MANASNEWR LV CQKPLEMHLQRRK+ EL+DF CSSQEN SENAPDS FSSWGKKRSPD
Sbjct: 165 MANASNEWRMLVRCQKPLEMHLQRRKRVELEDFRCSSQENVSENAPDSAFSSWGKKRSPD 224
Query: 61 GFVLLLRIDHKS 72
GF LLRI HKS
Sbjct: 225 GFFPLLRIGHKS 236
BLAST of IVF0018809 vs. NCBI nr
Match:
KAA0040927.1 (hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa] >TYK10610.1 hypothetical protein E5676_scaffold315G00560 [Cucumis melo var. makuwa])
HSP 1 Score: 115 bits (287), Expect = 3.40e-28
Identity = 62/101 (61.39%), Postives = 70/101 (69.31%), Query Frame = 0
Query: 1 MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQ---------------ENESENA 60
+ NAS EWRTLV CQKPL+MHLQ+RK AEL+DF CSSQ EN SENA
Sbjct: 284 LGNASKEWRTLVRCQKPLKMHLQQRKWAELEDFWCSSQQRKRVELDVFRCSSLENASENA 343
Query: 61 PDSVFSSWGKKRSPDGFVLLLRIDHKSFDLRGLYSEELNPH 86
DSVFSS G+K+ D F LLRI H+SFDLRG YSE+ NPH
Sbjct: 344 LDSVFSSCGEKQFFDDFFPLLRIGHQSFDLRGSYSEDFNPH 384
BLAST of IVF0018809 vs. NCBI nr
Match:
KAA0035524.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK31010.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])
HSP 1 Score: 113 bits (282), Expect = 1.24e-27
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0
Query: 1 MANASNEWRTLVWCQKPLEMHLQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPD 60
M +ASNEWRTLV CQKPLEMHLQ+RK+AEL+DF SQEN SENA + VFSSWGKK SP+
Sbjct: 1 MVDASNEWRTLVRCQKPLEMHLQKRKRAELEDFWSLSQENTSENALNPVFSSWGKKGSPN 60
Query: 61 GFVLLLRIDHKSFDLRG--LYSEELNP 85
GF L RI HKSFDL L + + P
Sbjct: 61 GFFPLFRIGHKSFDLEDHTLKTSTITP 87
BLAST of IVF0018809 vs. NCBI nr
Match:
KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 104 bits (260), Expect = 1.02e-23
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 0
Query: 22 LQRRKQAELKDFCCSSQENESENAPDSVFSSWGKKRSPDGFVLLLRIDHKSFDLRGLYSE 81
++RR +A+LKDF CSSQEN SEN DSVFSSW KK +PDGF LLRI HKSFDLRG YSE
Sbjct: 1017 VERRNRADLKDFRCSSQENASENDSDSVFSSWCKKWTPDGFFPLLRIGHKSFDLRGSYSE 1076
Query: 82 ELNPHFWHV 90
+ NPH WH
Sbjct: 1077 DFNPHSWHA 1085
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UVV0 | 2.1e-32 | 78.65 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3DFP2 | 8.4e-26 | 84.72 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CGX3 | 1.1e-22 | 61.39 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3E5W4 | 4.3e-22 | 74.67 | NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7V5J2 | 2.6e-19 | 72.06 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0057641.1 | 8.09e-39 | 78.65 | hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa] | [more] |
| TYK22521.1 | 7.50e-31 | 84.72 | uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa] | [more] |
| KAA0040927.1 | 3.40e-28 | 61.39 | hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa] >TYK1061... | [more] |
| KAA0035524.1 | 1.24e-27 | 66.67 | NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK31010.1 NBS-LRR t... | [more] |
| KAA0062888.1 | 1.02e-23 | 71.01 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
