IVF0013677 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCATTTTTCTTTCCCCTTTCTCTTCCAATTCAGAGCTCCGGCACTAAGCCCTAACAGGATTCCGGCGACCGAGAAGCCGAAACGGAATCAATGGATCTTCTCAAGCAAGAACTCCTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAAGCAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAATGGAAGCTAAAGCTCTCCGCCAATCCACCGCCTCCGCTACCGCCGCTGAGGCCGCCTCCACATCTTCCAAATCCAATCCATTAGCTTCAGCCTCCACCACTTCCTCCTCCGTCGCAATCAGCTCTACCACCACCACTTCGAAGTCCCTAACGGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGCTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGACTTGACTGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGCGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCCGATGAAGAGAGTGCCGATGGAGGGTCGAGTGGGGTTGAGACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAACCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTCAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGGTACGATTTTTGTCCCTTTAGTTACCTAGTCGATTTGTTGAACGTTCAATTCTCTTGATGATTCTTCATCTTGTCATCCTTAGACGTCATGGTAGGTTCGAGAATAACCAGATTGTCTTTTTCTATGTTAGTGGCTTTAAATAAAGAAGGAAAGTTAGTCCCAAGTTAGAGATGTTTACAAATAGCCCTTCCAAGTGGCTAAGAGAGTACTAAATAGAAGAGTTAAAAGCAGCTTAAAATTTACACCAAGCTAAAGCCACAAGAATAAGAAAATCCAAAAGATTGCTTAAGGACTTACTTTTTTTGTTGAATGTTAATATTCATCTCTAGCCATAGTAGTCAAAAGTGAGTTCTAGCAAAATCTGTACCCAAATTCCAAATAACTTTCTCTCTTTTTGAAACGATGACTATCAAGTATCCAAGGGAGTAGGTTGTTAACGTTAAAGGGAGAATGACTTGGGACTAGAAGTTCGTTTGCATATAATTCGGCAGTTCCTCAGCCAACTGGCACATGAGGAAGAGGTGACTTTTGGATTCGCATCTTCCAATACTTAGGTCTAGGGCATGGCATCAATTTGGAAATCTTTTTTCTTTTTTTGTTAGTCTTGGTGCTCCCATGAGAGAGCTTCTACAAGAAAACCTCAACTTCCTTTGGATATATTTCAAGTGGCATATCACCCTTGTAAAGATTGGTTTTCTTTGGAATTATTTGTCCACCATATCCTTGAATAGGAAGTAGGAAAGAGAAAAAAAATGTATTTTTCAGACAGCTGAATTCACTTATTGGAAGAGCACAAGTACAAGTTGGAGAGCAAGTATGGGAAAGAGACCCATTCTTTGTTTTCAGATCCAAAAAAAAAAAAAACCTTCAAACCAGGTCCTAGTTTCAAGTAGAGAGGTTCTAAATGTGTCTTGGATAGGAGCAATTTAACAATTGTAGATAGAGGATCTCCTTGGGAAAGAATTTGAAAATGAAGCTTGTAGGAGTGGTCATTCGACATTTTGATCCTATTGGAGTTCAAATCTTTTTAATCGATAATAGGTAAACGATTCAACAATCGCCAATAAAACATAGCTCAAGTGGCTATCAATCTCGATGTCTGAAGTTCAATCCCATCCCCCACCCCACATATGGTTAAAAAAAAAAAAGTAACCATTTGGCAATCACCTTTGGAAGTGTGGTAAGAAAATAGATACTGATAATAAACCATTATTTCATTTGTCAAGTCAGATTTCTTATGATCACAATGTTGGACTATGTCCACCTGTTTACGTAGTTGGTTGCTGGCAGTTTTGTTATTACCAGGGCTGCCGGCTGAATGCTTAACTTATGGCCTGATAGCGTCTTCAGTTAGACCCTTGTCTCTAGCCACCTGTGTGAGAGTAACTGTCCCCTTCTTGTCGCCACCCTATGAATCATATATTACTAGTTTAGAACTATCTAACCCCATTGGTGTGGTGGGCCGTCATTGTTAATTTCAATTGCACTAATTGACGTACCAAGCTCTCCTTCCCCTCTCCTAGGGATGGCTGTGGAATGTACATTACATTTTTTGTTTTCATATAATTGAATAAAGTGCTGTTTTCTGTATTTTGCCATATGCAAGTGTCATTCTCAAACTTCCCTCTCCAAATCTACTATTATATACTTATTCTTTTTTTTTTTTTTTATGTTCATTGCAAATCACTACATCAGTTGACCAATGTTATGTACGCGACAAACATATACTTAAATAGAAGTTTTTTATTTCTAATTATTTATCTGAGGGTTCTTCGGGATAAAAATTCTGGCATGTATCATGTTTGTATGGAATGAATTATTGCATGTATCAGGTAACTTCACATGAGTTTTATGTTTAGTGCTCTTTGTGGCTTGCAGCTTTGCAATGTCTTTAGATATAAATGTATAACTTGACATTTGTGAGTGCTGAGAAACAAGAGAACCGTGATGCAAGTTTGCTGAAATCAATTGATTATCTTGTAATATTTTCTTTTTAGCAGATAATTTTCATTAATGTATTATATTATTTTCTTTTAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATTGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAAAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACCTGCAATCAATCAAGAGATTGATGACGTTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCAAACGGTAGTGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCGGAAGATAGCTAGGAAGTTAAACTATCCTCTCTTGGCTCATCTTCTTTACCGTCTTCATATATGTAATATATAAAGTTCTTCAGCATAGTTTGGTAATCATTGAGTTGATTTTGGATTACTGTTTGAGATTGAAGTCTGTCGACGTTGCTAGCCAGCGATGTTTTGTCTACAGCTTTGCAAACGGTAATGATGCAGTCCATGCTATCTGAAGAGCTTTTGGGGGAATCAATCAGGGTGTCTCGAGGAAGTGCTTCGAATCATGCCCATCCCGAAGACCTGGTAAGAAGATCATCTCCTCGCTGCATTCTTTATGTCTGTATGATAAGTAATTTGAATCTAGCTTGGTAGTCAGTAAGTCAATGGCCAAGTACTGAACAAGATTTTTCTGTTTCTTCCAACTTCGACAATACGTGGAGTGAGAGATGATCTCAAGCTTTTTGGTCCAAAGGTTATATACTTTGTATCTCTCGCTTCTTTTGAGTAAGGATTGAGATTGAAGTATTTACCTAATATTTTGTTGTTTTGCTATGGTGGGTGATTGAGTGCAATCTCAAGCTTATTGAGTAGGGTGACAAGTGTATTAGGAATAAATAAAAGACAATGTCATAGTAGTGGATTCTCAATTGAAAGGTTTTTTTCTTTTCTTTTATTTTTTCAATCTACCGTTCTTTTTACAATATAATTTAATTACTCAAAAGGG CTCATTTTTCTTTCCCCTTTCTCTTCCAATTCAGAGCTCCGGCACTAAGCCCTAACAGGATTCCGGCGACCGAGAAGCCGAAACGGAATCAATGGATCTTCTCAAGCAAGAACTCCTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAAGCAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAATGGAAGCTAAAGCTCTCCGCCAATCCACCGCCTCCGCTACCGCCGCTGAGGCCGCCTCCACATCTTCCAAATCCAATCCATTAGCTTCAGCCTCCACCACTTCCTCCTCCGTCGCAATCAGCTCTACCACCACCACTTCGAAGTCCCTAACGGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGCTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGACTTGACTGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGCGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCCGATGAAGAGAGTGCCGATGGAGGGTCGAGTGGGGTTGAGACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAACCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTCAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATTGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAAAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACCTGCAATCAATCAAGAGATTGATGACGTTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCAAACGGTAGTGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCGGAAGATAGCTAGGAAGTTAAACTATCCTCTCTTGGCTCATCTTCTTTACCGTCTTCATATATGTAATATATAAAGTTCTTCAGCATAGTTTGGTAATCATTGAGTTGATTTTGGATTACTGTTTGAGATTGAAGTCTGTCGACGTTGCTAGCCAGCGATGTTTTGTCTACAGCTTTGCAAACGGTAATGATGCAGTCCATGCTATCTGAAGAGCTTTTGGGGGAATCAATCAGGGTGTCTCGAGGAAGTGCTTCGAATCATGCCCATCCCGAAGACCTGGTAAGAAGATCATCTCCTCGCTGCATTCTTTATGTCTGTATGATAAGTAATTTGAATCTAGCTTGGTAGTCAGTAAGTCAATGGCCAAGTACTGAACAAGATTTTTCTGTTTCTTCCAACTTCGACAATACGTGGAGTGAGAGATGATCTCAAGCTTTTTGGTCCAAAGGTTATATACTTTGTATCTCTCGCTTCTTTTGAGTAAGGATTGAGATTGAAGTATTTACCTAATATTTTGTTGTTTTGCTATGGTGGGTGATTGAGTGCAATCTCAAGCTTATTGAGTAGGGTGACAAGTGTATTAGGAATAAATAAAAGACAATGTCATAGTAGTGGATTCTCAATTGAAAGGTTTTTTTCTTTTCTTTTATTTTTTCAATCTACCGTTCTTTTTACAATATAATTTAATTACTCAAAAGGG ATGGAAGCTAAAGCTCTCCGCCAATCCACCGCCTCCGCTACCGCCGCTGAGGCCGCCTCCACATCTTCCAAATCCAATCCATTAGCTTCAGCCTCCACCACTTCCTCCTCCGTCGCAATCAGCTCTACCACCACCACTTCGAAGTCCCTAACGGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGCTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGACTTGACTGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGCGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCCGATGAAGAGAGTGCCGATGGAGGGTCGAGTGGGGTTGAGACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAACCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTCAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATTGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAAAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACCTGCAATCAATCAAGAGATTGATGACGTTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCAAACGGTAGTGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCGGAAGATAGCTAG MEAKALRQSTASATAAEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS Homology
BLAST of IVF0013677 vs. ExPASy Swiss-Prot
Match: Q99633 (Pre-mRNA-splicing factor 18 OS=Homo sapiens OX=9606 GN=PRPF18 PE=1 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-46 Identity = 112/281 (39.86%), Postives = 166/281 (59.07%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy Swiss-Prot
Match: Q8BM39 (Pre-mRNA-splicing factor 18 OS=Mus musculus OX=10090 GN=Prpf18 PE=1 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-46 Identity = 112/281 (39.86%), Postives = 166/281 (59.07%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy Swiss-Prot
Match: Q5RE03 (Pre-mRNA-splicing factor 18 OS=Pongo abelii OX=9601 GN=PRPF18 PE=2 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-46 Identity = 112/281 (39.86%), Postives = 166/281 (59.07%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy Swiss-Prot
Match: Q2HJ41 (Pre-mRNA-splicing factor 18 OS=Bos taurus OX=9913 GN=PRPF18 PE=2 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 4.5e-46 Identity = 111/281 (39.50%), Postives = 166/281 (59.07%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy Swiss-Prot
Match: Q9JKB8 (Pre-mRNA-splicing factor 18 OS=Rattus norvegicus OX=10116 GN=Prpf18 PE=2 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 4.5e-46 Identity = 111/281 (39.50%), Postives = 166/281 (59.07%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy TrEMBL
Match: A0A5D3DRE9 (Pre-mRNA-splicing factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001610 PE=3 SV=1) HSP 1 Score: 700.7 bits (1807), Expect = 3.4e-198 Identity = 374/375 (99.73%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy TrEMBL
Match: A0A1S3BS26 (Pre-mRNA-splicing factor 18 OS=Cucumis melo OX=3656 GN=LOC103492665 PE=3 SV=1) HSP 1 Score: 698.7 bits (1802), Expect = 1.3e-197 Identity = 373/375 (99.47%), Postives = 374/375 (99.73%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy TrEMBL
Match: A0A0A0K7C9 (Pre-mRNA-splicing factor 18 OS=Cucumis sativus OX=3659 GN=Csa_7G388420 PE=3 SV=1) HSP 1 Score: 692.2 bits (1785), Expect = 1.2e-195 Identity = 369/375 (98.40%), Postives = 371/375 (98.93%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy TrEMBL
Match: A0A6J1GQ96 (Pre-mRNA-splicing factor 18 OS=Cucurbita moschata OX=3662 GN=LOC111456490 PE=3 SV=1) HSP 1 Score: 669.5 bits (1726), Expect = 8.4e-189 Identity = 357/375 (95.20%), Postives = 364/375 (97.07%), Query Frame = 0
BLAST of IVF0013677 vs. ExPASy TrEMBL
Match: A0A6J1JZG6 (Pre-mRNA-splicing factor 18 OS=Cucurbita maxima OX=3661 GN=LOC111488824 PE=3 SV=1) HSP 1 Score: 667.9 bits (1722), Expect = 2.4e-188 Identity = 355/375 (94.67%), Postives = 363/375 (96.80%), Query Frame = 0
BLAST of IVF0013677 vs. NCBI nr
Match: KAA0064068.1 (pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa] >TYK26227.1 pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa]) HSP 1 Score: 699 bits (1803), Expect = 3.78e-252 Identity = 374/375 (99.73%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of IVF0013677 vs. NCBI nr
Match: XP_008451349.1 (PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo]) HSP 1 Score: 697 bits (1798), Expect = 2.18e-251 Identity = 373/375 (99.47%), Postives = 374/375 (99.73%), Query Frame = 0
BLAST of IVF0013677 vs. NCBI nr
Match: XP_004146980.1 (pre-mRNA-splicing factor 18 [Cucumis sativus] >KGN44809.1 hypothetical protein Csa_015983 [Cucumis sativus]) HSP 1 Score: 690 bits (1781), Expect = 8.48e-249 Identity = 369/375 (98.40%), Postives = 371/375 (98.93%), Query Frame = 0
BLAST of IVF0013677 vs. NCBI nr
Match: XP_038897671.1 (pre-mRNA-splicing factor 18 [Benincasa hispida] >XP_038897672.1 pre-mRNA-splicing factor 18 [Benincasa hispida]) HSP 1 Score: 678 bits (1749), Expect = 6.35e-244 Identity = 362/375 (96.53%), Postives = 367/375 (97.87%), Query Frame = 0
BLAST of IVF0013677 vs. NCBI nr
Match: XP_023549183.1 (pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo] >XP_023549184.1 pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo] >XP_023549185.1 pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 669 bits (1727), Expect = 1.42e-240 Identity = 357/375 (95.20%), Postives = 365/375 (97.33%), Query Frame = 0
BLAST of IVF0013677 vs. TAIR 10
Match: AT1G03140.1 (splicing factor Prp18 family protein ) HSP 1 Score: 481.9 bits (1239), Expect = 4.8e-136 Identity = 263/378 (69.58%), Postives = 314/378 (83.07%), Query Frame = 0
BLAST of IVF0013677 vs. TAIR 10
Match: AT1G54590.1 (INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: splicing factor Prp18 family protein (TAIR:AT1G03140.1); Has 388 Blast hits to 388 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 132; Plants - 48; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). ) HSP 1 Score: 327.8 bits (839), Expect = 1.1e-89 Identity = 182/290 (62.76%), Postives = 225/290 (77.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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