Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTGGGTTCAACTCCTCGAAGTATGAGCCCCGAAGATCAAAAGACTTATGACCAATACGATTCAAAGGGAAGAAACCATCGGGAGACCGCTTTTTATCCCACGACGAGAAAACTGAGTCAGGGGCTTACCCGCACGCCTTTTCTTGGTACGAACACCGAAAGACCTCGAGCTCAGCTTGTTTCCTTTGCTGCAAGTGCATTTCCATTGGTTACTGACACCAAACGAGCGTTCTTCACTCGTTGGAAGCATTGGCCACTTTTTAGACCATTTTGGATCACACCTTAA
mRNA sequence
ATGAGTGTGGGTTCAACTCCTCGAAGTATGAGCCCCGAAGATCAAAAGACTTATGACCAATACGATTCAAAGGGAAGAAACCATCGGGAGACCGCTTTTTATCCCACGACGAGAAAACTGAGTCAGGGGCTTACCCGCACGCCTTTTCTTGGTACGAACACCGAAAGACCTCGAGCTCAGCTTGTTTCCTTTGCTGCAAGTGCATTTCCATTGGTTACTGACACCAAACGAGCGTTCTTCACTCGTTGGAAGCATTGGCCACTTTTTAGACCATTTTGGATCACACCTTAA
Coding sequence (CDS)
ATGAGTGTGGGTTCAACTCCTCGAAGTATGAGCCCCGAAGATCAAAAGACTTATGACCAATACGATTCAAAGGGAAGAAACCATCGGGAGACCGCTTTTTATCCCACGACGAGAAAACTGAGTCAGGGGCTTACCCGCACGCCTTTTCTTGGTACGAACACCGAAAGACCTCGAGCTCAGCTTGTTTCCTTTGCTGCAAGTGCATTTCCATTGGTTACTGACACCAAACGAGCGTTCTTCACTCGTTGGAAGCATTGGCCACTTTTTAGACCATTTTGGATCACACCTTAA
Protein sequence
MSVGSTPRSMSPEDQKTYDQYDSKGRNHRETAFYPTTRKLSQGLTRTPFLGTNTERPRAQLVSFAASAFPLVTDTKRAFFTRWKHWPLFRPFWITP
Homology
BLAST of IVF0006296 vs. ExPASy TrEMBL
Match:
A0A5D3BQ75 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00560 PE=4 SV=1)
HSP 1 Score: 121.3 bits (303), Expect = 2.2e-24
Identity = 58/87 (66.67%), Postives = 69/87 (79.31%), Query Frame = 0
Query: 10 MSPEDQKTYDQYDSKGRNHRETAFYPTTRKLSQGLTRTPFLGTNTERPRAQLVSFAASAF 69
MSP+D+KTYDQY +KGRN R+T FY TRKLS +R+ FLGT+TE PRA VSFAASAF
Sbjct: 1 MSPDDRKTYDQYGAKGRNLRDTEFYTRTRKLSPRHSRSHFLGTSTESPRALPVSFAASAF 60
Query: 70 PLVTDTKRAFFTRWKHWPLFRPFWITP 97
+V+DT RAF +RWKHWP F PFW+ P
Sbjct: 61 SVVSDTGRAFASRWKHWPSFGPFWVAP 87
BLAST of IVF0006296 vs. ExPASy TrEMBL
Match:
A0A5A7V5Z6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001940 PE=4 SV=1)
HSP 1 Score: 121.3 bits (303), Expect = 2.2e-24
Identity = 58/87 (66.67%), Postives = 69/87 (79.31%), Query Frame = 0
Query: 10 MSPEDQKTYDQYDSKGRNHRETAFYPTTRKLSQGLTRTPFLGTNTERPRAQLVSFAASAF 69
MSP+D+KTYDQY +KGRN R+T FY TRKLS +R+ FLGT+TE PRA VSFAASAF
Sbjct: 1 MSPDDRKTYDQYGAKGRNLRDTEFYTRTRKLSPRHSRSHFLGTSTESPRALPVSFAASAF 60
Query: 70 PLVTDTKRAFFTRWKHWPLFRPFWITP 97
+V+DT RAF +RWKHWP F PFW+ P
Sbjct: 61 SVVSDTGRAFTSRWKHWPSFGPFWVAP 87
BLAST of IVF0006296 vs. ExPASy TrEMBL
Match:
A0A5A7VJF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00010 PE=4 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 8.6e-13
Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query: 37 TRKLSQGLTRTPFLGTNTERPRAQLVSFAASAFPLVTDTKRAFFTRWKHWPLFRPFWITP 96
TRKLS G +R+ FLGT+T PRAQ VSFAASAFP+V+DT RAF TRWK P F PFW+ P
Sbjct: 15 TRKLSPGHSRSRFLGTSTGSPRAQPVSFAASAFPVVSDTGRAFATRWKLRPSFGPFWVAP 74
BLAST of IVF0006296 vs. ExPASy TrEMBL
Match:
A0A5A7TUM9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00010 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 2.0e-06
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 0
Query: 20 QYDSKGRNHRETAFYPTTRKLSQGLTRTPFLGTNTERPRAQLVSFAASAFPLV 73
Q SKG+ RETAFYP RKL G +R+ FLGT+T PRA+ VSFAASAF +V
Sbjct: 175 QIRSKGKKPRETAFYPRMRKLGAGHSRSRFLGTSTGSPRAKPVSFAASAFSVV 227
BLAST of IVF0006296 vs. NCBI nr
Match:
TYK01208.1 (uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa])
HSP 1 Score: 121 bits (304), Expect = 2.81e-30
Identity = 58/87 (66.67%), Postives = 69/87 (79.31%), Query Frame = 0
Query: 10 MSPEDQKTYDQYDSKGRNHRETAFYPTTRKLSQGLTRTPFLGTNTERPRAQLVSFAASAF 69
MSP+D+KTYDQY +KGRN R+T FY TRKLS +R+ FLGT+TE PRA VSFAASAF
Sbjct: 1 MSPDDRKTYDQYGAKGRNLRDTEFYTRTRKLSPRHSRSHFLGTSTESPRALPVSFAASAF 60
Query: 70 PLVTDTKRAFFTRWKHWPLFRPFWITP 96
+V+DT RAF +RWKHWP F PFW+ P
Sbjct: 61 SVVSDTGRAFASRWKHWPSFGPFWVAP 87
BLAST of IVF0006296 vs. NCBI nr
Match:
KAA0062674.1 (uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa])
HSP 1 Score: 121 bits (304), Expect = 4.69e-30
Identity = 58/87 (66.67%), Postives = 69/87 (79.31%), Query Frame = 0
Query: 10 MSPEDQKTYDQYDSKGRNHRETAFYPTTRKLSQGLTRTPFLGTNTERPRAQLVSFAASAF 69
MSP+D+KTYDQY +KGRN R+T FY TRKLS +R+ FLGT+TE PRA VSFAASAF
Sbjct: 1 MSPDDRKTYDQYGAKGRNLRDTEFYTRTRKLSPRHSRSHFLGTSTESPRALPVSFAASAF 60
Query: 70 PLVTDTKRAFFTRWKHWPLFRPFWITP 96
+V+DT RAF +RWKHWP F PFW+ P
Sbjct: 61 SVVSDTGRAFTSRWKHWPSFGPFWVAP 87
BLAST of IVF0006296 vs. NCBI nr
Match:
KAA0065855.1 (hypothetical protein E6C27_scaffold538G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 80.9 bits (198), Expect = 9.32e-17
Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query: 37 TRKLSQGLTRTPFLGTNTERPRAQLVSFAASAFPLVTDTKRAFFTRWKHWPLFRPFWITP 96
TRKLS G +R+ FLGT+T PRAQ VSFAASAFP+V+DT RAF TRWK P F PFW+ P
Sbjct: 15 TRKLSPGHSRSRFLGTSTGSPRAQPVSFAASAFPVVSDTGRAFATRWKLRPSFGPFWVAP 74
BLAST of IVF0006296 vs. NCBI nr
Match:
KAA0046850.1 (hypothetical protein E6C27_scaffold19358G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 61.6 bits (148), Expect = 7.39e-09
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 0
Query: 20 QYDSKGRNHRETAFYPTTRKLSQGLTRTPFLGTNTERPRAQLVSFAASAFPLV 72
Q SKG+ RETAFYP RKL G +R+ FLGT+T PRA+ VSFAASAF +V
Sbjct: 175 QIRSKGKKPRETAFYPRMRKLGAGHSRSRFLGTSTGSPRAKPVSFAASAFSVV 227
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BQ75 | 2.2e-24 | 66.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7V5Z6 | 2.2e-24 | 66.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7VJF7 | 8.6e-13 | 68.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7TUM9 | 2.0e-06 | 62.26 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK01208.1 | 2.81e-30 | 66.67 | uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa] | [more] |
| KAA0062674.1 | 4.69e-30 | 66.67 | uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa] | [more] |
| KAA0065855.1 | 9.32e-17 | 68.33 | hypothetical protein E6C27_scaffold538G00010 [Cucumis melo var. makuwa] | [more] |
| KAA0046850.1 | 7.39e-09 | 62.26 | hypothetical protein E6C27_scaffold19358G00010 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
